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The map label for this gene is ydiY [C]

Identifier: 113969121

GI number: 113969121

Start: 904620

End: 905357

Strand: Direct

Name: ydiY [C]

Synonym: Shewmr4_0777

Alternate gene names: 113969121

Gene position: 904620-905357 (Clockwise)

Preceding gene: 113969120

Following gene: 113969122

Centisome position: 19.22

GC content: 46.21

Gene sequence:

>738_bases
ATGAAGAAAGTACTGACCGCAGCACTATTAATGACGGCACCATTTATGGCGAATGCGGGAGCCGATTTTGTTAAAGGCGA
TAGGACATTCGCAGGCGAAGCCGAGTTAGGTGCAACCTTAACCACAGGTAACACCGATACCTCATCCTATAAGGGTCGCT
TAAGCCTTAAACATGAATTGGGTGACTGGGAAAACCAATATCTTTTAGAAGGTTTGTATAAAGAAGATACGGGTGAAGTG
ACCGCTAAGCGTTATTTAGCGGGCGCACAGGGTAACTATAAAATGACAGATCGCAGCTATCTGTTTGCCAACGCTAACTA
TGAAGTTGACCCTTTTACCGGTTATGACTATACAGCCTCTGGGGCCGCGGGTTATGGTCACAGACTCTATGACACCAGCA
AAACATTTTTAGATGTGGAAATCGGTCCCGGTTACATCTATCAGCGCCTCGATTCAGAGCAAGCGCTGTTAGAAGGCACA
GATTCGAATGACAGTGTGGTTGCCCACGGTGTGATCAACTTCGAAACTGAAATCACAGAAACCTCAAAATTCCAGCAACG
TTTTGTGGCCGACTATGGCGATAAATTGGATGCGCGTTCAGAAACCTCGCTCACGGCCAATATCATTGGCGCCTTGGCGA
TGAAGTTTGCGATTATTGTGCGCTACAACAGTGAGCCACTGGACGATAAAAAGAGCACTGATACCGAAACGAATATGACC
TTGCTCTATTCGTTCTAA

Upstream 100 bases:

>100_bases
GCTTTTTTATGCAAAAAACCGTTGAATTTTCATTTTTTAATCGTAAATGTTAGTATTGCCATGATTTTTAGGGGATTAAA
CGGAACGGGAACGGATAAAC

Downstream 100 bases:

>100_bases
TCAATGTGATTGATATCAATAAAAAAGCACCGAGAGGTGCTTTTTTATTGGCTGTTTTTGGACTAACTTGAAACAAAGTT
AGTTAATTCTTTATTAGTTG

Product: hypothetical protein

Products: NA

Alternate protein names: Outer Membrane Protein; Orphan Protein; Conserved Protein YdiY; Exported Protein

Number of amino acids: Translated: 245; Mature: 245

Protein sequence:

>245_residues
MKKVLTAALLMTAPFMANAGADFVKGDRTFAGEAELGATLTTGNTDTSSYKGRLSLKHELGDWENQYLLEGLYKEDTGEV
TAKRYLAGAQGNYKMTDRSYLFANANYEVDPFTGYDYTASGAAGYGHRLYDTSKTFLDVEIGPGYIYQRLDSEQALLEGT
DSNDSVVAHGVINFETEITETSKFQQRFVADYGDKLDARSETSLTANIIGALAMKFAIIVRYNSEPLDDKKSTDTETNMT
LLYSF

Sequences:

>Translated_245_residues
MKKVLTAALLMTAPFMANAGADFVKGDRTFAGEAELGATLTTGNTDTSSYKGRLSLKHELGDWENQYLLEGLYKEDTGEV
TAKRYLAGAQGNYKMTDRSYLFANANYEVDPFTGYDYTASGAAGYGHRLYDTSKTFLDVEIGPGYIYQRLDSEQALLEGT
DSNDSVVAHGVINFETEITETSKFQQRFVADYGDKLDARSETSLTANIIGALAMKFAIIVRYNSEPLDDKKSTDTETNMT
LLYSF
>Mature_245_residues
MKKVLTAALLMTAPFMANAGADFVKGDRTFAGEAELGATLTTGNTDTSSYKGRLSLKHELGDWENQYLLEGLYKEDTGEV
TAKRYLAGAQGNYKMTDRSYLFANANYEVDPFTGYDYTASGAAGYGHRLYDTSKTFLDVEIGPGYIYQRLDSEQALLEGT
DSNDSVVAHGVINFETEITETSKFQQRFVADYGDKLDARSETSLTANIIGALAMKFAIIVRYNSEPLDDKKSTDTETNMT
LLYSF

Specific function: Unknown

COG id: COG3137

COG function: function code M; Putative salt-induced outer membrane protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788016, Length=229, Percent_Identity=24.0174672489083, Blast_Score=61, Evalue=7e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27048; Mature: 27048

Theoretical pI: Translated: 4.42; Mature: 4.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKVLTAALLMTAPFMANAGADFVKGDRTFAGEAELGATLTTGNTDTSSYKGRLSLKHEL
CHHHHHHHHHHHCCHHCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCEEEEEECC
GDWENQYLLEGLYKEDTGEVTAKRYLAGAQGNYKMTDRSYLFANANYEVDPFTGYDYTAS
CCCCHHHHHHHHHCCCCCHHHHHHHHHCCCCCEEECCCEEEEECCCEEECCCCCCCCCCC
GAAGYGHRLYDTSKTFLDVEIGPGYIYQRLDSEQALLEGTDSNDSVVAHGVINFETEITE
CCCCCCCEEEECCCEEEEEEECCCHHHHHCCCCHHEEECCCCCCCEEEEEEEEEEECCHH
TSKFQQRFVADYGDKLDARSETSLTANIIGALAMKFAIIVRYNSEPLDDKKSTDTETNMT
HHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHEEEEEEECCCCCCCCCCCCCCCCEE
LLYSF
EEEEC
>Mature Secondary Structure
MKKVLTAALLMTAPFMANAGADFVKGDRTFAGEAELGATLTTGNTDTSSYKGRLSLKHEL
CHHHHHHHHHHHCCHHCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCEEEEEECC
GDWENQYLLEGLYKEDTGEVTAKRYLAGAQGNYKMTDRSYLFANANYEVDPFTGYDYTAS
CCCCHHHHHHHHHCCCCCHHHHHHHHHCCCCCEEECCCEEEEECCCEEECCCCCCCCCCC
GAAGYGHRLYDTSKTFLDVEIGPGYIYQRLDSEQALLEGTDSNDSVVAHGVINFETEITE
CCCCCCCEEEECCCEEEEEEECCCHHHHHCCCCHHEEECCCCCCCEEEEEEEEEEECCHH
TSKFQQRFVADYGDKLDARSETSLTANIIGALAMKFAIIVRYNSEPLDDKKSTDTETNMT
HHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHEEEEEEECCCCCCCCCCCCCCCCEE
LLYSF
EEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA