Click here to switch to the map view.

The map label for this gene is yacL [C]

Identifier: 113969000

GI number: 113969000

Start: 764701

End: 765075

Strand: Direct

Name: yacL [C]

Synonym: Shewmr4_0656

Alternate gene names: 113969000

Gene position: 764701-765075 (Clockwise)

Preceding gene: 113968998

Following gene: 113969003

Centisome position: 16.25

GC content: 46.4

Gene sequence:

>375_bases
ATGGAATATGAATTTCGGCGCAATAGTTTGACGGGCACTTATCTAGCCAGCTTTAGTATGGACCATGAGGTGCTGGGCCA
ATGGTTTTCGGAAGAGTTGGGGCCAGAGTTAGCCAAAATTCAACAAGTGCTCGATATTATCAAAGATATTCAAGCGGGCA
AGCGAGATTCTTGGCGTCTGATTGGTGGCGATCTCACCCTAGATCTCGATGAAGAACAGGCGCGGATTTATGCCAATGCT
CTAGGATTTGAGCAGGAATATGAGCTCGAAGAATCGATGTCACTCTACGATGCGGAATCAGAAGCCTATTGTGGCTTAGA
GGATTTAGAGGAAGCCCTGTTAAGTTGGTATGAGTTTGTGGAAAAAGGGCGCTAG

Upstream 100 bases:

>100_bases
CTGATAATTGCCTCACTTCTCGGGCCTAAATTGCTGGTCAAGCAACTTATGATGAAATAGATTAAAATTAGCCATAGTTG
TGATGCATTGAGAAGATAAA

Downstream 100 bases:

>100_bases
CTAAGCCCTTTTAATCTCGATATAACAAAGGCAATCTATTGATTGCCTTTGTTATTTTTAACCTTGCGTTTAATCATGAG
GTTTCAGCATTAGTTATTCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 124; Mature: 124

Protein sequence:

>124_residues
MEYEFRRNSLTGTYLASFSMDHEVLGQWFSEELGPELAKIQQVLDIIKDIQAGKRDSWRLIGGDLTLDLDEEQARIYANA
LGFEQEYELEESMSLYDAESEAYCGLEDLEEALLSWYEFVEKGR

Sequences:

>Translated_124_residues
MEYEFRRNSLTGTYLASFSMDHEVLGQWFSEELGPELAKIQQVLDIIKDIQAGKRDSWRLIGGDLTLDLDEEQARIYANA
LGFEQEYELEESMSLYDAESEAYCGLEDLEEALLSWYEFVEKGR
>Mature_124_residues
MEYEFRRNSLTGTYLASFSMDHEVLGQWFSEELGPELAKIQQVLDIIKDIQAGKRDSWRLIGGDLTLDLDEEQARIYANA
LGFEQEYELEESMSLYDAESEAYCGLEDLEEALLSWYEFVEKGR

Specific function: Unknown

COG id: COG3112

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0231 family [H]

Homologues:

Organism=Escherichia coli, GI87081687, Length=122, Percent_Identity=37.7049180327869, Blast_Score=79, Evalue=1e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008249
- ProDom:   PD020773 [H]

Pfam domain/function: PF06062 UPF0231 [H]

EC number: NA

Molecular weight: Translated: 14391; Mature: 14391

Theoretical pI: Translated: 3.85; Mature: 3.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEYEFRRNSLTGTYLASFSMDHEVLGQWFSEELGPELAKIQQVLDIIKDIQAGKRDSWRL
CCCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCEE
IGGDLTLDLDEEQARIYANALGFEQEYELEESMSLYDAESEAYCGLEDLEEALLSWYEFV
ECCCEEEECCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHH
EKGR
HCCC
>Mature Secondary Structure
MEYEFRRNSLTGTYLASFSMDHEVLGQWFSEELGPELAKIQQVLDIIKDIQAGKRDSWRL
CCCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCEE
IGGDLTLDLDEEQARIYANALGFEQEYELEESMSLYDAESEAYCGLEDLEEALLSWYEFV
ECCCEEEECCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHH
EKGR
HCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA