Definition Shewanella sp. MR-4 chromosome, complete genome.
Accession NC_008321
Length 4,706,287

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The map label for this gene is 113968998

Identifier: 113968998

GI number: 113968998

Start: 762385

End: 763500

Strand: Direct

Name: 113968998

Synonym: Shewmr4_0654

Alternate gene names: NA

Gene position: 762385-763500 (Clockwise)

Preceding gene: 113968997

Following gene: 113969000

Centisome position: 16.2

GC content: 51.79

Gene sequence:

>1116_bases
ATGCAACCGACTGCGTCGTCTTTAACCATTGGGGAGCTTGCCGCAGGGCAAGCACTCACTCTGCCGATTTACCACTTCAA
GCCAAGTGGTCATGTTTCTGGCCCTAAAGTGTATATTCAGGCCAATGTCCACGGCGCTGAGGTGCAGGGGAATGCGGTGA
TTTTCCAATTGATGAAGCAGCTTGAGCGCTGTGACATCTTAGGGGAAATCACCTTAGTGCCCTTGGCAAATCCGCTGGGG
ATAAATCAAAAGAGTGGTGAGTTTACGCTGGGGCGTTTTGACCCTATCACAGGGGCAAACTGGAACCGCGAGTACTTAAA
TCACTCGATTGATTTACCCGCTTGGTACCGTGAACATGCCGAGCTTAGTGATAGTGCGCTTATCCAAGCTTACCGCAGTA
CCTTAGTTGAGGCGTGTCAGCAGCGATTACGTAACGAGTGGGGCGTGACCACGGGCCACAGATTAGCGGTTAACCTGCAG
GCCATGGCCCACGAGGCGGATATAGTATTGGATCTGCATACCGGGCCTAAATCCTGTAAACACTTGTATTGCCCAGAATA
TGATATTGTGGCGGCGCAGTTTTTCTCGATTCCTTACACCTTAGTGATCCCCAATAGTTTTGGCGGGGCTATGGATGAAG
CGGCATTTTGCCCTTGGTGGCAATTGAGTGAAGTCGCCAAAGCACAGGGGCGAGAACTTGAGATCGCTGTTTCGGCCTTT
ACCTTGGAACTTGCGAGCCAAGAACGCATTTGCCTTGAGGATGCTTTAGTCGATGCTCAGGGGATTTTGGCCTACTTGAG
TCATCGTGGGGTGATCGCCGAGCGAGTCGCACCCGCAAAGATGCCACGTTTTGGCTGTTATCTTAAGGATTACAAAAAGT
ACCATGCGCCCATGGCGGGATTGGTGGAATATGTGGCGCCCGTGGGAGAGCCACTGGCGGCGGGTGAGACCTTAGTCAAT
CTGCTGCGGCTCGACTTATATGGCAGTGAGCAGGAGCTGACGGCGCTAAGCTTGCCGCAGGATTGTGTGCCCATACTCCA
TTTTGCCTCGGCGTCAGTGCATCAAGGCACAGAGCTTTATAAAGTCATGACGAATTTGTTTGAATTGCCACAGTAA

Upstream 100 bases:

>100_bases
CAAGGCGCCAGCCCGCATAATTTGTGCGTATTGGTCGCCGAATCAGAAGCGGCGCAAGTGGTTAAAGCACTGCACGAAAA
CCTGTTCGAAGGCGCGTAAT

Downstream 100 bases:

>100_bases
CGGCAATGGGTAAAACAAAACGCCAATCATAAGATTGGCGTTTTTTATTCCAGTCTACAACCACTTAAAGCGATAGAAGA
GTGCCATTTGCAGGGCGACC

Product: succinylglutamate desuccinylase/aspartoacylase

Products: NA

Alternate protein names: Deacylase; Succinylglutamate Desuccinylase; Amino Acid ABC Transporter-Like Protein; Arginine Catabolism Protein; Arginine/Ornithine Transport Operon(AotO) Protein; Succinylglutamate Desuccinylase / Aspartoacylase Family

Number of amino acids: Translated: 371; Mature: 371

Protein sequence:

>371_residues
MQPTASSLTIGELAAGQALTLPIYHFKPSGHVSGPKVYIQANVHGAEVQGNAVIFQLMKQLERCDILGEITLVPLANPLG
INQKSGEFTLGRFDPITGANWNREYLNHSIDLPAWYREHAELSDSALIQAYRSTLVEACQQRLRNEWGVTTGHRLAVNLQ
AMAHEADIVLDLHTGPKSCKHLYCPEYDIVAAQFFSIPYTLVIPNSFGGAMDEAAFCPWWQLSEVAKAQGRELEIAVSAF
TLELASQERICLEDALVDAQGILAYLSHRGVIAERVAPAKMPRFGCYLKDYKKYHAPMAGLVEYVAPVGEPLAAGETLVN
LLRLDLYGSEQELTALSLPQDCVPILHFASASVHQGTELYKVMTNLFELPQ

Sequences:

>Translated_371_residues
MQPTASSLTIGELAAGQALTLPIYHFKPSGHVSGPKVYIQANVHGAEVQGNAVIFQLMKQLERCDILGEITLVPLANPLG
INQKSGEFTLGRFDPITGANWNREYLNHSIDLPAWYREHAELSDSALIQAYRSTLVEACQQRLRNEWGVTTGHRLAVNLQ
AMAHEADIVLDLHTGPKSCKHLYCPEYDIVAAQFFSIPYTLVIPNSFGGAMDEAAFCPWWQLSEVAKAQGRELEIAVSAF
TLELASQERICLEDALVDAQGILAYLSHRGVIAERVAPAKMPRFGCYLKDYKKYHAPMAGLVEYVAPVGEPLAAGETLVN
LLRLDLYGSEQELTALSLPQDCVPILHFASASVHQGTELYKVMTNLFELPQ
>Mature_371_residues
MQPTASSLTIGELAAGQALTLPIYHFKPSGHVSGPKVYIQANVHGAEVQGNAVIFQLMKQLERCDILGEITLVPLANPLG
INQKSGEFTLGRFDPITGANWNREYLNHSIDLPAWYREHAELSDSALIQAYRSTLVEACQQRLRNEWGVTTGHRLAVNLQ
AMAHEADIVLDLHTGPKSCKHLYCPEYDIVAAQFFSIPYTLVIPNSFGGAMDEAAFCPWWQLSEVAKAQGRELEIAVSAF
TLELASQERICLEDALVDAQGILAYLSHRGVIAERVAPAKMPRFGCYLKDYKKYHAPMAGLVEYVAPVGEPLAAGETLVN
LLRLDLYGSEQELTALSLPQDCVPILHFASASVHQGTELYKVMTNLFELPQ

Specific function: Unknown

COG id: COG3608

COG function: function code R; Predicted deacylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40873; Mature: 40873

Theoretical pI: Translated: 5.36; Mature: 5.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQPTASSLTIGELAAGQALTLPIYHFKPSGHVSGPKVYIQANVHGAEVQGNAVIFQLMKQ
CCCCCCCCCHHHHCCCCEEEEEEEEECCCCCCCCCEEEEEECCCCCEECCCHHHHHHHHH
LERCDILGEITLVPLANPLGINQKSGEFTLGRFDPITGANWNREYLNHSIDLPAWYREHA
HHHCCHHCCEEEEECCCCCCCCCCCCCEEECCCCCCCCCCCCHHHHCCCCCCCHHHHHHH
ELSDSALIQAYRSTLVEACQQRLRNEWGVTTGHRLAVNLQAMAHEADIVLDLHTGPKSCK
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEHHHHCCCEEEEEECCCCHHCC
HLYCPEYDIVAAQFFSIPYTLVIPNSFGGAMDEAAFCPWWQLSEVAKAQGRELEIAVSAF
CCCCCCHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHCCCEEEEEEEEE
TLELASQERICLEDALVDAQGILAYLSHRGVIAERVAPAKMPRFGCYLKDYKKYHAPMAG
EEECCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCHHHHHHHHHHHHCCCHHH
LVEYVAPVGEPLAAGETLVNLLRLDLYGSEQELTALSLPQDCVPILHFASASVHQGTELY
HHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCEEECCCHHHHHHHHHHCCCHHCCHHHH
KVMTNLFELPQ
HHHHHHHCCCC
>Mature Secondary Structure
MQPTASSLTIGELAAGQALTLPIYHFKPSGHVSGPKVYIQANVHGAEVQGNAVIFQLMKQ
CCCCCCCCCHHHHCCCCEEEEEEEEECCCCCCCCCEEEEEECCCCCEECCCHHHHHHHHH
LERCDILGEITLVPLANPLGINQKSGEFTLGRFDPITGANWNREYLNHSIDLPAWYREHA
HHHCCHHCCEEEEECCCCCCCCCCCCCEEECCCCCCCCCCCCHHHHCCCCCCCHHHHHHH
ELSDSALIQAYRSTLVEACQQRLRNEWGVTTGHRLAVNLQAMAHEADIVLDLHTGPKSCK
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEHHHHCCCEEEEEECCCCHHCC
HLYCPEYDIVAAQFFSIPYTLVIPNSFGGAMDEAAFCPWWQLSEVAKAQGRELEIAVSAF
CCCCCCHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHCCCEEEEEEEEE
TLELASQERICLEDALVDAQGILAYLSHRGVIAERVAPAKMPRFGCYLKDYKKYHAPMAG
EEECCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCHHHHHHHHHHHHCCCHHH
LVEYVAPVGEPLAAGETLVNLLRLDLYGSEQELTALSLPQDCVPILHFASASVHQGTELY
HHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCEEECCCHHHHHHHHHHCCCHHCCHHHH
KVMTNLFELPQ
HHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA