Click here to switch to the map view.

The map label for this gene is 113968833

Identifier: 113968833

GI number: 113968833

Start: 561684

End: 562127

Strand: Direct

Name: 113968833

Synonym: Shewmr4_0489

Alternate gene names: NA

Gene position: 561684-562127 (Clockwise)

Preceding gene: 113968832

Following gene: 113968834

Centisome position: 11.93

GC content: 51.8

Gene sequence:

>444_bases
ATGATGAATAAAGCGATTCGACACAGCCTATTAGGCGGCTTACTGGCGCTGGGCCTAGGTGGCATGAGTTTACCCGTCGT
GGCTGGTGGTGGCTCTGAGATCTCCGAGGCGCCCTATAACGAAATTCAGTTGAATCCGATTTCCATGCGGGAAGCCGAAA
CCTTAGTCGGCAAGCCAGGGGTGTATTTTTTCGATGTAAACACGCTGGAAATCTGGGCGGATGGTTTTATCCCCGGAGCG
GTGTTTTTCAATGTGCAGAATTGGCGAGATCTACTGCCAAAGAATAAAGACGCTGTGATGGTGTTCTATTGCGCTAACCG
TCTTTGTACCGCCAGCAACATGGCCGCACGGGAAACCATGAAGCTAGGTTACACAGGTGTGCGCCACATGGCCGATGGCA
TCTTCGGCTGGCGCATGTCAGGCAGAACAACAGAAAAACCATAG

Upstream 100 bases:

>100_bases
GCCATTATCGATGGCAACGGCCTGAGCGCACAGAAAATGTAGTTCGACTCGAGTCTAACTTGTCCCCGACACGCGAGTGT
CGGGGGCTATACGAGGCCAA

Downstream 100 bases:

>100_bases
TAATCAAATAAATATTTTAATCGGTTATGGGGTTACCCATACGTTTTCGGCTAAAGCACTAAAGCCCAAGGGCTAAATTG
TAGAGAACATAAAATGAAAA

Product: rhodanese domain-containing protein

Products: NA

Alternate protein names: Rhodanese Domain Protein; Cytochrome C Family Protein; Rhodanese-Like Protein

Number of amino acids: Translated: 147; Mature: 147

Protein sequence:

>147_residues
MMNKAIRHSLLGGLLALGLGGMSLPVVAGGGSEISEAPYNEIQLNPISMREAETLVGKPGVYFFDVNTLEIWADGFIPGA
VFFNVQNWRDLLPKNKDAVMVFYCANRLCTASNMAARETMKLGYTGVRHMADGIFGWRMSGRTTEKP

Sequences:

>Translated_147_residues
MMNKAIRHSLLGGLLALGLGGMSLPVVAGGGSEISEAPYNEIQLNPISMREAETLVGKPGVYFFDVNTLEIWADGFIPGA
VFFNVQNWRDLLPKNKDAVMVFYCANRLCTASNMAARETMKLGYTGVRHMADGIFGWRMSGRTTEKP
>Mature_147_residues
MMNKAIRHSLLGGLLALGLGGMSLPVVAGGGSEISEAPYNEIQLNPISMREAETLVGKPGVYFFDVNTLEIWADGFIPGA
VFFNVQNWRDLLPKNKDAVMVFYCANRLCTASNMAARETMKLGYTGVRHMADGIFGWRMSGRTTEKP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16090; Mature: 16090

Theoretical pI: Translated: 8.21; Mature: 8.21

Prosite motif: PS50206 RHODANESE_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
6.1 %Met     (Translated Protein)
7.5 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
6.1 %Met     (Mature Protein)
7.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMNKAIRHSLLGGLLALGLGGMSLPVVAGGGSEISEAPYNEIQLNPISMREAETLVGKPG
CCCHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCEEEECCCCCHHHHHHHCCCC
VYFFDVNTLEIWADGFIPGAVFFNVQNWRDLLPKNKDAVMVFYCANRLCTASNMAARETM
EEEEECCEEEEEECCCCCCEEEEEECHHHHCCCCCCCEEEEEEECCCCCCCCCHHHHHHH
KLGYTGVRHMADGIFGWRMSGRTTEKP
HHCCHHHHHHHCCCCEEEECCCCCCCC
>Mature Secondary Structure
MMNKAIRHSLLGGLLALGLGGMSLPVVAGGGSEISEAPYNEIQLNPISMREAETLVGKPG
CCCHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCEEEECCCCCHHHHHHHCCCC
VYFFDVNTLEIWADGFIPGAVFFNVQNWRDLLPKNKDAVMVFYCANRLCTASNMAARETM
EEEEECCEEEEEECCCCCCEEEEEECHHHHCCCCCCCEEEEEEECCCCCCCCCHHHHHHH
KLGYTGVRHMADGIFGWRMSGRTTEKP
HHCCHHHHHHHCCCCEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA