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The map label for this gene is 113968832

Identifier: 113968832

GI number: 113968832

Start: 559496

End: 561625

Strand: Direct

Name: 113968832

Synonym: Shewmr4_0488

Alternate gene names: NA

Gene position: 559496-561625 (Clockwise)

Preceding gene: 113968827

Following gene: 113968833

Centisome position: 11.89

GC content: 48.54

Gene sequence:

>2130_bases
ATGAAGCGATGGAAATCCAAAGTAGCATTAAGCGTGCTATTTTGTTTAGGTTCTGCCGTAAGCGCTACCACAGTCGCTGC
CGATGCTAAGTCGGAGGGGAAAGTGGTACCTGGAGTGGGTAATAAACAGCAATCCCACTATACTCAAGATATTCTGGCTA
ACCCCAATTTAAATGAAAATTTAATGGAGAAATCCCGCGGTGTGAAAACACTGCAGGATTATATTGTTCAAGAGCAAGAA
TTGTTTGATTTTCTATTTGAAAATCACCCAGTTTTTAAATACGACGCTGAAGGTCGATTAAAGGGCACTTATAAAGTCAG
TGACCGTGGTGAAGAATATTTGCACGGTGGTGACAGTGTTGCTTACAGCAAACACAGTAAAGAAGTGAACCCCACTGATG
GCACCGCAGTGCGTTACAGCTCCTATAACGATGGCCAGCGTCCTAAGGCACTGCAATACCGTTTAGGAGCCAAATCGATT
TTAGATTTCCCGAACAAGTTTGTCGGCCCAGAAAAATGCGGTGAGTGTCACGGTCCGCAATACGAGAAGTGGAGACGTTC
ACGCCACTCTAAGACGATTCGCTTCCCTGGCGAGCATCCTGAGGTCGATAACGACCTGAAGAAAACCATGTATGGCACTA
AGGATACCTCGATTCTGCCATCGGGTATTACCGCCGATGCCATCTACGCCACTGTGGGTACACCACGGACTAAGTATGGT
TTTATCGACGCCTACCTAGTGCGTGGTACTTATCACGTGAAAGACGGTCTGTTGAAGGATGGCACTGGGACTATGGTCGC
TGGTGGTAACCAGTTCTCCCGTGGTTGGGCTGAGTGGTTAACCCCTGAAATGGCAGCCAAAATCAACAAAGCTATCCCAA
GCTTCCCCGTCAAAATGGAAGACTTCGGTACCAGCGGTTCACACCAATGGGGCATGAGTTCATACGGCGCTAAGTACGAG
AAGGAATTCCTGTTCCAACCGGCTAGCTCCTATTGCGAAATGTGCCACAGCTTTAAGTTTGACTTCCAAACTAAAGATGA
ATTTTTCGCGGCTTTAGGTAACCCAAAAGAGCTGCAAAAACACACGATTTCTAAAGGGATTACCTGTGAAGAGTGTCACG
GCGCAGGTGGTCACTTAGACGGTGGTATTGGTGGTGGCATGCCATCTAACTGTGAACGTTGTCACCAACGCTTTAACTTT
GTTGAAGAGTTAGCCGACACGCCACAGGGTAAAGAGAAGCTGGAATATGCCTTCAACGTGAAGATGAAGTCTTCTTGCCC
ATCCTGTGGTACTGAAGGTTCGCAAATGTTTGCCTCAGCGCACTATGACAAAGGCATGCGTTGTTCAACCTGTCACGATC
CGCACGAAGTCACCGACGGTGATTGGACTACGGGTATGACTAAGCCAAAAATCATCAAAGAGTGTACTGACTGTCACACG
GCCCAAGCCGAGATCGCCAAGAACACTAACACCCACAGCAACCAAACCTGTCAAAGCTGTCATATGCCAAACATGGGAAG
TTGTGAAAACTTCACGGCGATCCAATTCCCAGATATGGCGGGCTTCGACAACGTGCGTAAGTCACACATGTGGAAGATTG
ATGTCGACCCACTGCGTAAGACCCTCAACCCACCTGAAGGCAAGTCTCGCGATGCGACCACTAAGGGCTGGACTGTGGCG
AAAGACGAGAACGGCTACAACTACCTCGACCTGATGTGGACCTGTGCCCGTACATCTGCCTCAGACCATGATGTGGTGGA
TAACAAAGGTTGTCATAGCCAGTTCCAATCTGAGCTAGAAGTCGGCCTGCACTTCGAAGATCAGCTGGAAATCTACGGCG
AAGTTCAAAAGTGGCAAAAACCCGTTAAGGATACTTTTGCTCAAGTAGAACAAGCCCTTGCCCGTATCGACAAGCTGTTA
GAAGTCACCAAGCTGTCGGTAGAAGACAAGACTCAAGTGTTGATGTTGACCGACAAAGCCCAGGACGTTGTTCGCCTAAT
CAAGGCTGACGGCTCATGGGGTGTCCATGGTCCACGTTATTCACTGAAACGTCTCGACGCTGCCTTGACCTATGTTACTC
AAGCCCAAGCCATTATCGATGGCAACGGCCTGAGCGCACAGAAAATGTAG

Upstream 100 bases:

>100_bases
GCTGCTTCATCATGCCGCCACTGGTCAATTGTTTATGTCGTTCAGTGAACAGTTAGGTTCAGTGGAAAATATAAAACTAA
TGATAAATTAGGAGTGAATG

Downstream 100 bases:

>100_bases
TTCGACTCGAGTCTAACTTGTCCCCGACACGCGAGTGTCGGGGGCTATACGAGGCCAAATGATGAATAAAGCGATTCGAC
ACAGCCTATTAGGCGGCTTA

Product: cytochrome c

Products: NA

Alternate protein names: tRNA Synthetase Class II; Cytochrome C Family Protein

Number of amino acids: Translated: 709; Mature: 709

Protein sequence:

>709_residues
MKRWKSKVALSVLFCLGSAVSATTVAADAKSEGKVVPGVGNKQQSHYTQDILANPNLNENLMEKSRGVKTLQDYIVQEQE
LFDFLFENHPVFKYDAEGRLKGTYKVSDRGEEYLHGGDSVAYSKHSKEVNPTDGTAVRYSSYNDGQRPKALQYRLGAKSI
LDFPNKFVGPEKCGECHGPQYEKWRRSRHSKTIRFPGEHPEVDNDLKKTMYGTKDTSILPSGITADAIYATVGTPRTKYG
FIDAYLVRGTYHVKDGLLKDGTGTMVAGGNQFSRGWAEWLTPEMAAKINKAIPSFPVKMEDFGTSGSHQWGMSSYGAKYE
KEFLFQPASSYCEMCHSFKFDFQTKDEFFAALGNPKELQKHTISKGITCEECHGAGGHLDGGIGGGMPSNCERCHQRFNF
VEELADTPQGKEKLEYAFNVKMKSSCPSCGTEGSQMFASAHYDKGMRCSTCHDPHEVTDGDWTTGMTKPKIIKECTDCHT
AQAEIAKNTNTHSNQTCQSCHMPNMGSCENFTAIQFPDMAGFDNVRKSHMWKIDVDPLRKTLNPPEGKSRDATTKGWTVA
KDENGYNYLDLMWTCARTSASDHDVVDNKGCHSQFQSELEVGLHFEDQLEIYGEVQKWQKPVKDTFAQVEQALARIDKLL
EVTKLSVEDKTQVLMLTDKAQDVVRLIKADGSWGVHGPRYSLKRLDAALTYVTQAQAIIDGNGLSAQKM

Sequences:

>Translated_709_residues
MKRWKSKVALSVLFCLGSAVSATTVAADAKSEGKVVPGVGNKQQSHYTQDILANPNLNENLMEKSRGVKTLQDYIVQEQE
LFDFLFENHPVFKYDAEGRLKGTYKVSDRGEEYLHGGDSVAYSKHSKEVNPTDGTAVRYSSYNDGQRPKALQYRLGAKSI
LDFPNKFVGPEKCGECHGPQYEKWRRSRHSKTIRFPGEHPEVDNDLKKTMYGTKDTSILPSGITADAIYATVGTPRTKYG
FIDAYLVRGTYHVKDGLLKDGTGTMVAGGNQFSRGWAEWLTPEMAAKINKAIPSFPVKMEDFGTSGSHQWGMSSYGAKYE
KEFLFQPASSYCEMCHSFKFDFQTKDEFFAALGNPKELQKHTISKGITCEECHGAGGHLDGGIGGGMPSNCERCHQRFNF
VEELADTPQGKEKLEYAFNVKMKSSCPSCGTEGSQMFASAHYDKGMRCSTCHDPHEVTDGDWTTGMTKPKIIKECTDCHT
AQAEIAKNTNTHSNQTCQSCHMPNMGSCENFTAIQFPDMAGFDNVRKSHMWKIDVDPLRKTLNPPEGKSRDATTKGWTVA
KDENGYNYLDLMWTCARTSASDHDVVDNKGCHSQFQSELEVGLHFEDQLEIYGEVQKWQKPVKDTFAQVEQALARIDKLL
EVTKLSVEDKTQVLMLTDKAQDVVRLIKADGSWGVHGPRYSLKRLDAALTYVTQAQAIIDGNGLSAQKM
>Mature_709_residues
MKRWKSKVALSVLFCLGSAVSATTVAADAKSEGKVVPGVGNKQQSHYTQDILANPNLNENLMEKSRGVKTLQDYIVQEQE
LFDFLFENHPVFKYDAEGRLKGTYKVSDRGEEYLHGGDSVAYSKHSKEVNPTDGTAVRYSSYNDGQRPKALQYRLGAKSI
LDFPNKFVGPEKCGECHGPQYEKWRRSRHSKTIRFPGEHPEVDNDLKKTMYGTKDTSILPSGITADAIYATVGTPRTKYG
FIDAYLVRGTYHVKDGLLKDGTGTMVAGGNQFSRGWAEWLTPEMAAKINKAIPSFPVKMEDFGTSGSHQWGMSSYGAKYE
KEFLFQPASSYCEMCHSFKFDFQTKDEFFAALGNPKELQKHTISKGITCEECHGAGGHLDGGIGGGMPSNCERCHQRFNF
VEELADTPQGKEKLEYAFNVKMKSSCPSCGTEGSQMFASAHYDKGMRCSTCHDPHEVTDGDWTTGMTKPKIIKECTDCHT
AQAEIAKNTNTHSNQTCQSCHMPNMGSCENFTAIQFPDMAGFDNVRKSHMWKIDVDPLRKTLNPPEGKSRDATTKGWTVA
KDENGYNYLDLMWTCARTSASDHDVVDNKGCHSQFQSELEVGLHFEDQLEIYGEVQKWQKPVKDTFAQVEQALARIDKLL
EVTKLSVEDKTQVLMLTDKAQDVVRLIKADGSWGVHGPRYSLKRLDAALTYVTQAQAIIDGNGLSAQKM

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 79026; Mature: 79026

Theoretical pI: Translated: 7.04; Mature: 7.04

Prosite motif: PS51008 MULTIHEME_CYTC L=RR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRWKSKVALSVLFCLGSAVSATTVAADAKSEGKVVPGVGNKQQSHYTQDILANPNLNEN
CCHHHHHHHHHHHHHHCCHHHHHHEEECCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCHH
LMEKSRGVKTLQDYIVQEQELFDFLFENHPVFKYDAEGRLKGTYKVSDRGEEYLHGGDSV
HHHHHCCHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCEEEEEEECCCCHHHHCCCCCE
AYSKHSKEVNPTDGTAVRYSSYNDGQRPKALQYRLGAKSILDFPNKFVGPEKCGECHGPQ
EECCCCCCCCCCCCCEEEECCCCCCCCCCHHHHHCCHHHHHHCCHHCCCHHHHCCCCCCC
YEKWRRSRHSKTIRFPGEHPEVDNDLKKTMYGTKDTSILPSGITADAIYATVGTPRTKYG
HHHHHHHHCCCEEECCCCCCCCCHHHHHHHCCCCCCCCCCCCCCHHHEEEECCCCCCCCC
FIDAYLVRGTYHVKDGLLKDGTGTMVAGGNQFSRGWAEWLTPEMAAKINKAIPSFPVKME
CCEEEEECCEEECCCCCEECCCCCEEECCCHHHHHHHHHCCHHHHHHHHHHCCCCCCCHH
DFGTSGSHQWGMSSYGAKYEKEFLFQPASSYCEMCHSFKFDFQTKDEFFAALGNPKELQK
HCCCCCCCCCCCHHHCCHHHHHHHCCCHHHHHHHHHHCCCCCCCHHHHHHHCCCHHHHHH
HTISKGITCEECHGAGGHLDGGIGGGMPSNCERCHQRFNFVEELADTPQGKEKLEYAFNV
HHHHCCCCHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHEEE
KMKSSCPSCGTEGSQMFASAHYDKGMRCSTCHDPHEVTDGDWTTGMTKPKIIKECTDCHT
EECCCCCCCCCCHHHHHHHHHCCCCCEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
AQAEIAKNTNTHSNQTCQSCHMPNMGSCENFTAIQFPDMAGFDNVRKSHMWKIDVDPLRK
HHHHHHHCCCCCCCHHHHHCCCCCCCCCCCEEEEECCCCCCCHHHHHHCEEEEEHHHHHH
TLNPPEGKSRDATTKGWTVAKDENGYNYLDLMWTCARTSASDHDVVDNKGCHSQFQSELE
HCCCCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHH
VGLHFEDQLEIYGEVQKWQKPVKDTFAQVEQALARIDKLLEVTKLSVEDKTQVLMLTDKA
HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCH
QDVVRLIKADGSWGVHGPRYSLKRLDAALTYVTQAQAIIDGNGLSAQKM
HHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHEECCCCCCCCCC
>Mature Secondary Structure
MKRWKSKVALSVLFCLGSAVSATTVAADAKSEGKVVPGVGNKQQSHYTQDILANPNLNEN
CCHHHHHHHHHHHHHHCCHHHHHHEEECCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCHH
LMEKSRGVKTLQDYIVQEQELFDFLFENHPVFKYDAEGRLKGTYKVSDRGEEYLHGGDSV
HHHHHCCHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCEEEEEEECCCCHHHHCCCCCE
AYSKHSKEVNPTDGTAVRYSSYNDGQRPKALQYRLGAKSILDFPNKFVGPEKCGECHGPQ
EECCCCCCCCCCCCCEEEECCCCCCCCCCHHHHHCCHHHHHHCCHHCCCHHHHCCCCCCC
YEKWRRSRHSKTIRFPGEHPEVDNDLKKTMYGTKDTSILPSGITADAIYATVGTPRTKYG
HHHHHHHHCCCEEECCCCCCCCCHHHHHHHCCCCCCCCCCCCCCHHHEEEECCCCCCCCC
FIDAYLVRGTYHVKDGLLKDGTGTMVAGGNQFSRGWAEWLTPEMAAKINKAIPSFPVKME
CCEEEEECCEEECCCCCEECCCCCEEECCCHHHHHHHHHCCHHHHHHHHHHCCCCCCCHH
DFGTSGSHQWGMSSYGAKYEKEFLFQPASSYCEMCHSFKFDFQTKDEFFAALGNPKELQK
HCCCCCCCCCCCHHHCCHHHHHHHCCCHHHHHHHHHHCCCCCCCHHHHHHHCCCHHHHHH
HTISKGITCEECHGAGGHLDGGIGGGMPSNCERCHQRFNFVEELADTPQGKEKLEYAFNV
HHHHCCCCHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHEEE
KMKSSCPSCGTEGSQMFASAHYDKGMRCSTCHDPHEVTDGDWTTGMTKPKIIKECTDCHT
EECCCCCCCCCCHHHHHHHHHCCCCCEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
AQAEIAKNTNTHSNQTCQSCHMPNMGSCENFTAIQFPDMAGFDNVRKSHMWKIDVDPLRK
HHHHHHHCCCCCCCHHHHHCCCCCCCCCCCEEEEECCCCCCCHHHHHHCEEEEEHHHHHH
TLNPPEGKSRDATTKGWTVAKDENGYNYLDLMWTCARTSASDHDVVDNKGCHSQFQSELE
HCCCCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHH
VGLHFEDQLEIYGEVQKWQKPVKDTFAQVEQALARIDKLLEVTKLSVEDKTQVLMLTDKA
HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCH
QDVVRLIKADGSWGVHGPRYSLKRLDAALTYVTQAQAIIDGNGLSAQKM
HHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA