Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113478291

Identifier: 113478291

GI number: 113478291

Start: 7572184

End: 7573545

Strand: Reverse

Name: 113478291

Synonym: Tery_4965

Alternate gene names: NA

Gene position: 7573545-7572184 (Counterclockwise)

Preceding gene: 113478296

Following gene: 113478289

Centisome position: 97.72

GC content: 37.15

Gene sequence:

>1362_bases
ATGACCTTAAAAATACTTTGCGTGAGTAATGGTCACGGAGAAGATGTGATCGGGTCTCAAATTTTGCAAGAACTCAAAAA
ATATCCTCTTCCTCCTGATCTTGTTGCTTTACCGATAGTGGGAGAAGGACAAGCTTATACAATAGCTGACTTCTCAATTA
TTGGCCCCCGACAAAGAATGCCTTCTGGTGGATTTATTTATATGGATGGAAAGCAGTTATGGCGAGATGTTAAAAGTGGT
TTGTTAAGTATTGTTTTGGCTCAGTTGAAAGCATTAAGATCTTGGATAAGTGATCAAACTAATGATGGTCATCAAGTAGT
TATTTTGGCAGTTGGGGATATTGTGCCTTTATTATTTGCTTGGTTAAGTGGAGCACCTTATACTTTTTTAGGAACTGCTA
AATCTGAATATCTGATTCGAGATCAAAATGAGCAACTTCTCCCTAGGTCTTGGGTGGAAAGTTTCCTGCTTTCCTCAGGG
TCAGTCTATTTTCCTTGGGAACGTTGGTTAATGAGTAGAAAGAAATGTGGGGCAGTCCTTGCTAGAGATGATTTAACAGC
AAAAATGTTAAAGAAAAAGTCTATTCGAGCTTATTGTGTGGGAAACCCGATGATGGATGGTGTCAAGTTAAAAAGCTCTA
TGGAGTTAATGTCTGGTAATAAAGCCCGGATGCTAGAGATGCATGATCAATTAACAATTACTTTGTTACCAGGGTCTCGT
TCTCCAGAAGCTTATGCCAATTGGCAAATTATTCTTCAGGCAGTGACAGGGTTGCTCGAAAGCTTTCCACAAAAAAAGTT
TTTGTTTCTGGCAGCGATCGCTCCTAATTTAGATTTGGAAGCTTTTACTAAACAGCTTTTGTTTGATAATTGGCAAACTG
AACAAGAAATTCTAACTCAGAACCAAAACAGTATTTTACAAATGCCAACTGATAAACCTGAACTAACTTTTTGTTTTAGA
GAAAAAAGTATTCATTTTCCCATAAAATTTATTTCTCAGAATAAAAATGCAAGTCTGATTTTAAATCAACAGGCTTTTCA
AGAATTTATACATCAGGGAGATTTAGCTATTGCTATGGCAGGTACGGCTACAGAACAATTTGTCGGTTTAGGGAAACCAG
CGATCGCTATTCCTGGCAAGGGTCCACAGTTTACATCCACTTTTGCAGAAAATCAAAGTCGCCTTTTAGGAATTTCTCAA
ATTCTGGTTAAAGATCCTAGAGAAGTTTGTGGTGTAGTTAAGTCTTTGTTAGATAACTTAGAGCAACGGCGCTTAATTGC
TAAAAATGGTGTTAAAAGAATGGGAGGCTCAGGTGCGGCTAAAAGAATTGCTAATTTTTTAATTAATTTAAATTGGGTTT
AG

Upstream 100 bases:

>100_bases
AATATATACATAAAAAAAATTTCTAATACTATTAGAGGAAGTAGTGTTAACTCATTTCCTCCAGAGGAGACTAACTGATA
ACTGATAACTGATAACTGAT

Downstream 100 bases:

>100_bases
GAAATTCATCTATGATGGAACATACTTCTAATAACAAAAACTTTTATAGGGAGGTTCTTAGGAACTTGCCTACAGTTTTC
TACCTAAATGAAAACTGCTA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 453; Mature: 452

Protein sequence:

>453_residues
MTLKILCVSNGHGEDVIGSQILQELKKYPLPPDLVALPIVGEGQAYTIADFSIIGPRQRMPSGGFIYMDGKQLWRDVKSG
LLSIVLAQLKALRSWISDQTNDGHQVVILAVGDIVPLLFAWLSGAPYTFLGTAKSEYLIRDQNEQLLPRSWVESFLLSSG
SVYFPWERWLMSRKKCGAVLARDDLTAKMLKKKSIRAYCVGNPMMDGVKLKSSMELMSGNKARMLEMHDQLTITLLPGSR
SPEAYANWQIILQAVTGLLESFPQKKFLFLAAIAPNLDLEAFTKQLLFDNWQTEQEILTQNQNSILQMPTDKPELTFCFR
EKSIHFPIKFISQNKNASLILNQQAFQEFIHQGDLAIAMAGTATEQFVGLGKPAIAIPGKGPQFTSTFAENQSRLLGISQ
ILVKDPREVCGVVKSLLDNLEQRRLIAKNGVKRMGGSGAAKRIANFLINLNWV

Sequences:

>Translated_453_residues
MTLKILCVSNGHGEDVIGSQILQELKKYPLPPDLVALPIVGEGQAYTIADFSIIGPRQRMPSGGFIYMDGKQLWRDVKSG
LLSIVLAQLKALRSWISDQTNDGHQVVILAVGDIVPLLFAWLSGAPYTFLGTAKSEYLIRDQNEQLLPRSWVESFLLSSG
SVYFPWERWLMSRKKCGAVLARDDLTAKMLKKKSIRAYCVGNPMMDGVKLKSSMELMSGNKARMLEMHDQLTITLLPGSR
SPEAYANWQIILQAVTGLLESFPQKKFLFLAAIAPNLDLEAFTKQLLFDNWQTEQEILTQNQNSILQMPTDKPELTFCFR
EKSIHFPIKFISQNKNASLILNQQAFQEFIHQGDLAIAMAGTATEQFVGLGKPAIAIPGKGPQFTSTFAENQSRLLGISQ
ILVKDPREVCGVVKSLLDNLEQRRLIAKNGVKRMGGSGAAKRIANFLINLNWV
>Mature_452_residues
TLKILCVSNGHGEDVIGSQILQELKKYPLPPDLVALPIVGEGQAYTIADFSIIGPRQRMPSGGFIYMDGKQLWRDVKSGL
LSIVLAQLKALRSWISDQTNDGHQVVILAVGDIVPLLFAWLSGAPYTFLGTAKSEYLIRDQNEQLLPRSWVESFLLSSGS
VYFPWERWLMSRKKCGAVLARDDLTAKMLKKKSIRAYCVGNPMMDGVKLKSSMELMSGNKARMLEMHDQLTITLLPGSRS
PEAYANWQIILQAVTGLLESFPQKKFLFLAAIAPNLDLEAFTKQLLFDNWQTEQEILTQNQNSILQMPTDKPELTFCFRE
KSIHFPIKFISQNKNASLILNQQAFQEFIHQGDLAIAMAGTATEQFVGLGKPAIAIPGKGPQFTSTFAENQSRLLGISQI
LVKDPREVCGVVKSLLDNLEQRRLIAKNGVKRMGGSGAAKRIANFLINLNWV

Specific function: Unknown

COG id: COG4370

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 50472; Mature: 50340

Theoretical pI: Translated: 9.57; Mature: 9.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLKILCVSNGHGEDVIGSQILQELKKYPLPPDLVALPIVGEGQAYTIADFSIIGPRQRM
CEEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEECCCCEEEEEEEEEECCHHCC
PSGGFIYMDGKQLWRDVKSGLLSIVLAQLKALRSWISDQTNDGHQVVILAVGDIVPLLFA
CCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEHHHHHHHHHH
WLSGAPYTFLGTAKSEYLIRDQNEQLLPRSWVESFLLSSGSVYFPWERWLMSRKKCGAVL
HHCCCCEEEEECCCCCEEEECCCCCCCCHHHHHHHHHCCCCEEECHHHHHHHHHHHCCEE
ARDDLTAKMLKKKSIRAYCVGNPMMDGVKLKSSMELMSGNKARMLEMHDQLTITLLPGSR
ECCHHHHHHHHHCCCEEEECCCCCCCCEEHHHHHHHHCCCCCEEEEECCCEEEEEECCCC
SPEAYANWQIILQAVTGLLESFPQKKFLFLAAIAPNLDLEAFTKQLLFDNWQTEQEILTQ
CCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHCCCCCHHHHHHC
NQNSILQMPTDKPELTFCFREKSIHFPIKFISQNKNASLILNQQAFQEFIHQGDLAIAMA
CCCCEEECCCCCCCEEEEEECCCCCCCEEEEECCCCCEEEECHHHHHHHHHCCCEEEEEE
GTATEQFVGLGKPAIAIPGKGPQFTSTFAENQSRLLGISQILVKDPREVCGVVKSLLDNL
CCCHHHHHCCCCCEEEECCCCCCCHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
EQRRLIAKNGVKRMGGSGAAKRIANFLINLNWV
HHHHHHHHCCHHHCCCCHHHHHHHHHHHEECCC
>Mature Secondary Structure 
TLKILCVSNGHGEDVIGSQILQELKKYPLPPDLVALPIVGEGQAYTIADFSIIGPRQRM
EEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEECCCCEEEEEEEEEECCHHCC
PSGGFIYMDGKQLWRDVKSGLLSIVLAQLKALRSWISDQTNDGHQVVILAVGDIVPLLFA
CCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEHHHHHHHHHH
WLSGAPYTFLGTAKSEYLIRDQNEQLLPRSWVESFLLSSGSVYFPWERWLMSRKKCGAVL
HHCCCCEEEEECCCCCEEEECCCCCCCCHHHHHHHHHCCCCEEECHHHHHHHHHHHCCEE
ARDDLTAKMLKKKSIRAYCVGNPMMDGVKLKSSMELMSGNKARMLEMHDQLTITLLPGSR
ECCHHHHHHHHHCCCEEEECCCCCCCCEEHHHHHHHHCCCCCEEEEECCCEEEEEECCCC
SPEAYANWQIILQAVTGLLESFPQKKFLFLAAIAPNLDLEAFTKQLLFDNWQTEQEILTQ
CCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHCCCCCHHHHHHC
NQNSILQMPTDKPELTFCFREKSIHFPIKFISQNKNASLILNQQAFQEFIHQGDLAIAMA
CCCCEEECCCCCCCEEEEEECCCCCCCEEEEECCCCCEEEECHHHHHHHHHCCCEEEEEE
GTATEQFVGLGKPAIAIPGKGPQFTSTFAENQSRLLGISQILVKDPREVCGVVKSLLDNL
CCCHHHHHCCCCCEEEECCCCCCCHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
EQRRLIAKNGVKRMGGSGAAKRIANFLINLNWV
HHHHHHHHCCHHHCCCCHHHHHHHHHHHEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA