Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113478203

Identifier: 113478203

GI number: 113478203

Start: 7445429

End: 7445674

Strand: Reverse

Name: 113478203

Synonym: Tery_4854

Alternate gene names: NA

Gene position: 7445674-7445429 (Counterclockwise)

Preceding gene: 113478213

Following gene: 113478202

Centisome position: 96.07

GC content: 44.72

Gene sequence:

>246_bases
ATGCCGTGTGTTTTAATCATTGGCTTGAGCATCATTCCCATTCCAGAACTCAACTCCCATTCCCTGTTGATTATGGATAA
CGCTCCCTTTCATCAGAAGAAAGAAATCCGGGCGCTCGCAGCCCTTGATGGGCACAGTGTTTTTTTCTTAGCGCCCTACT
CACCGGACTTCAACAAGATTGAAGAAGATTTAGCCATTCTCAAAAAGCAACGGAATATATGCTCCACCAGAAACAACACT
GGATGA

Upstream 100 bases:

>100_bases
TATGGGGAGCAAGATGGCAAAACCCGCAAGGGTAACAGCTTGATTGTCGGCAAGAGAGGTTCAAAACTTTTAGCTCCAGT
ATTATTGACAGGGACGACCA

Downstream 100 bases:

>100_bases
CATTGTTAGACTGTACGGAACTTAATTGTAATGACTATAACTATAAATCAGATCATCTATTAGCCAAAAATGTTCAATTT
TTGGATGAAAATATATAGAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 81; Mature: 80

Protein sequence:

>81_residues
MPCVLIIGLSIIPIPELNSHSLLIMDNAPFHQKKEIRALAALDGHSVFFLAPYSPDFNKIEEDLAILKKQRNICSTRNNT
G

Sequences:

>Translated_81_residues
MPCVLIIGLSIIPIPELNSHSLLIMDNAPFHQKKEIRALAALDGHSVFFLAPYSPDFNKIEEDLAILKKQRNICSTRNNT
G
>Mature_80_residues
PCVLIIGLSIIPIPELNSHSLLIMDNAPFHQKKEIRALAALDGHSVFFLAPYSPDFNKIEEDLAILKKQRNICSTRNNTG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9044; Mature: 8912

Theoretical pI: Translated: 7.52; Mature: 7.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPCVLIIGLSIIPIPELNSHSLLIMDNAPFHQKKEIRALAALDGHSVFFLAPYSPDFNKI
CCEEEEECCEEECCCCCCCCEEEEEECCCCCCHHHHHEEEECCCCEEEEEECCCCCHHHH
EEDLAILKKQRNICSTRNNTG
HHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
PCVLIIGLSIIPIPELNSHSLLIMDNAPFHQKKEIRALAALDGHSVFFLAPYSPDFNKI
CEEEEECCEEECCCCCCCCEEEEEECCCCCCHHHHHEEEECCCCEEEEEECCCCCHHHH
EEDLAILKKQRNICSTRNNTG
HHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA