Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113478133

Identifier: 113478133

GI number: 113478133

Start: 7320747

End: 7322795

Strand: Reverse

Name: 113478133

Synonym: Tery_4767

Alternate gene names: NA

Gene position: 7322795-7320747 (Counterclockwise)

Preceding gene: 113478134

Following gene: 113478132

Centisome position: 94.49

GC content: 31.14

Gene sequence:

>2049_bases
ATGAACTACTATGAATTAGGAGAAAAATTTCTAGAACAACAACAGTGGGAGAAAGCTGTTACTAGCTACCGCCAAGCTAT
AAAATTAAACCCTACTTTTTCTTGGCATTACTACAAATTAGGGCAAGCTTTAACTCAACTACAAAAATGGGATGAAGCTA
TTACTAATTACCAAAAAGCTATAGAACTAAATTCTGATTTTCCTTGGTCTTATCATCACTTAGGAAATGCTTTACTAAAA
CAGGAAAAATGGGAAGAAGCAGTTAATGCTTACCACAATTTTATTAAACTTAATTCTGATAATTATTGGGCTTACCATAA
ATTAGGAGAAGCCTTATTTAAAATAGGAGAATTTGACGCCGCAATTATTTCCTATCAAAAAGCCATTAAAATTAATCCAG
AAATTAAAGGAACTCATCAAAAATTAGCAGATATTTTATTTCATATTGGTCAGCTAGAAGCAGCAGAAATCGCATATCGT
AAGGCCATAAAACTCAATCCAGAAGTAGTTTGGTATCGCCAATGTTTAGGAGATGTTTTACTTAGACAAAAAAGATTAGA
CGAAGCGATCGCTACTTATTTAGAAGTTGCTAAAGTTAGCCATAATCTAACTTGGATGCACCTACAGTTAGGAGATGCTT
TTGCTCAACTTTGTCAATCAAATTTAGACGAAACTATCAATTACTATTGCCAAGCCATTAAAAATCCCAATCAATATCCG
ATTTATCAAAAATCACTATATTTAATCAAAACAAATCCAGAAATATATCTAGAATTAGGAAATTATCTAGCACAAAAAAA
TCAAATTTATGGAGCCATAATTATTTATTACTTGTTGCTAGAAATATTACCCATTCAAATAAATATTCATCAGCAACTTG
ACCAGATATTCCGGCAAAAAAATCAACTAGAACAACAGCTAAATTCATTTTATTCTGCCGTTAAAACTGACGGAAATAGT
CAATCTTACTATCACCTAGGATTAGCATTAACTAAACAACAAAAATGGTTAGAAGCTACCATAATCTACCATCGTGCTAT
AGAAATTAATCCTGATTTTGCTTGGTGGTCTGATATTCGTCTGTGGGAAACTTTTAGAAAGCAAGATAAACTCCAAAAAA
TAGTTGATTTGTTTCAAGAATTTATTAGTTTTCCAAATAACTCACTCTGTCGTTATCTCAATTTAGCTGAAGCTCTAACT
CAAGTAAATAGAAATACTGAAGCACTAGAAATTTATCAAAATGCTTCTCAACAACAAATTCAACAAAACTATCCTAACTT
TTTTCTAAAATCCCAAAAGTCCCCTCAAATATTAGGACCTAATTTTCTAGTAATTGGAGTTAAGAAAGGAGGAACTACAT
CTATTTATCATTATCTAATTCAACATCCACAAATTTTACCTGGAATCAAAAAAGAAATTGATTTTTGGTCTTTCTATTTC
CATCGAGGTTTAGATTGGTATCGGGCACATTTTCCATCAATTCCAGAGTCAGAAAAATACTTAACTGGAGAAGCAAGTCC
TAGTTATTTTGATGCTCCAGATGTTCCCGCTAGACTATTTCATTTTTTCCCCAGAATTAAACTAATTGTTTTATTAAGAA
ATCCAGTGGATAGAACTATATCTAATTACTATCATGAAGTACGTTCACAAGCAGAGAGCATGTCTATTGAAGAGGTAATT
AATTCTAGGCTGGAAAAACTGAACAAAATTTCATCTAGTTTTATCACAGAAAAAGATTATTGGAATTATCAGGGAGATTA
TATAGCTTCTAGTATTTATTTAGATTGGCTGAAGAAATGGTTGAATATTTTTCCCAGAGAACAATTATTAATTTTGCCTA
GTGAAAAATTTTATAGTCAGCCAAAAACCATAATGAAGCAAGTTTTCAATTTTCTAGATTTGCCAGATTATCAAATACAA
GATTATCCAAAATTTAATGCTGCTTCTTATGCGTCTATTAGTAAATCACTTCGACAAAAATTAAACGATTATTTTCAGTC
TCATAATCAGCGTTTAGAGGAATATCTGGGTATAAAATTTGGTTGGTAA

Upstream 100 bases:

>100_bases
CGAATTATTGAGAAATTTTACTCAGAAGGAATATTATAAGAGAAAATAAATCTAAAAGATCTGAAATGCTTCTATATAAA
ATTTAATTGGGAAACTAGAG

Downstream 100 bases:

>100_bases
AAGAAGGTATTAGATTCAGATACCAATTTCCCCAGTAAAATTATAGAATTTATTGAATATTTGTACTTGTTTTAATTTTC
TTTTTTTGAGGTTATTTTCC

Product: sulfotransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 682; Mature: 682

Protein sequence:

>682_residues
MNYYELGEKFLEQQQWEKAVTSYRQAIKLNPTFSWHYYKLGQALTQLQKWDEAITNYQKAIELNSDFPWSYHHLGNALLK
QEKWEEAVNAYHNFIKLNSDNYWAYHKLGEALFKIGEFDAAIISYQKAIKINPEIKGTHQKLADILFHIGQLEAAEIAYR
KAIKLNPEVVWYRQCLGDVLLRQKRLDEAIATYLEVAKVSHNLTWMHLQLGDAFAQLCQSNLDETINYYCQAIKNPNQYP
IYQKSLYLIKTNPEIYLELGNYLAQKNQIYGAIIIYYLLLEILPIQINIHQQLDQIFRQKNQLEQQLNSFYSAVKTDGNS
QSYYHLGLALTKQQKWLEATIIYHRAIEINPDFAWWSDIRLWETFRKQDKLQKIVDLFQEFISFPNNSLCRYLNLAEALT
QVNRNTEALEIYQNASQQQIQQNYPNFFLKSQKSPQILGPNFLVIGVKKGGTTSIYHYLIQHPQILPGIKKEIDFWSFYF
HRGLDWYRAHFPSIPESEKYLTGEASPSYFDAPDVPARLFHFFPRIKLIVLLRNPVDRTISNYYHEVRSQAESMSIEEVI
NSRLEKLNKISSSFITEKDYWNYQGDYIASSIYLDWLKKWLNIFPREQLLILPSEKFYSQPKTIMKQVFNFLDLPDYQIQ
DYPKFNAASYASISKSLRQKLNDYFQSHNQRLEEYLGIKFGW

Sequences:

>Translated_682_residues
MNYYELGEKFLEQQQWEKAVTSYRQAIKLNPTFSWHYYKLGQALTQLQKWDEAITNYQKAIELNSDFPWSYHHLGNALLK
QEKWEEAVNAYHNFIKLNSDNYWAYHKLGEALFKIGEFDAAIISYQKAIKINPEIKGTHQKLADILFHIGQLEAAEIAYR
KAIKLNPEVVWYRQCLGDVLLRQKRLDEAIATYLEVAKVSHNLTWMHLQLGDAFAQLCQSNLDETINYYCQAIKNPNQYP
IYQKSLYLIKTNPEIYLELGNYLAQKNQIYGAIIIYYLLLEILPIQINIHQQLDQIFRQKNQLEQQLNSFYSAVKTDGNS
QSYYHLGLALTKQQKWLEATIIYHRAIEINPDFAWWSDIRLWETFRKQDKLQKIVDLFQEFISFPNNSLCRYLNLAEALT
QVNRNTEALEIYQNASQQQIQQNYPNFFLKSQKSPQILGPNFLVIGVKKGGTTSIYHYLIQHPQILPGIKKEIDFWSFYF
HRGLDWYRAHFPSIPESEKYLTGEASPSYFDAPDVPARLFHFFPRIKLIVLLRNPVDRTISNYYHEVRSQAESMSIEEVI
NSRLEKLNKISSSFITEKDYWNYQGDYIASSIYLDWLKKWLNIFPREQLLILPSEKFYSQPKTIMKQVFNFLDLPDYQIQ
DYPKFNAASYASISKSLRQKLNDYFQSHNQRLEEYLGIKFGW
>Mature_682_residues
MNYYELGEKFLEQQQWEKAVTSYRQAIKLNPTFSWHYYKLGQALTQLQKWDEAITNYQKAIELNSDFPWSYHHLGNALLK
QEKWEEAVNAYHNFIKLNSDNYWAYHKLGEALFKIGEFDAAIISYQKAIKINPEIKGTHQKLADILFHIGQLEAAEIAYR
KAIKLNPEVVWYRQCLGDVLLRQKRLDEAIATYLEVAKVSHNLTWMHLQLGDAFAQLCQSNLDETINYYCQAIKNPNQYP
IYQKSLYLIKTNPEIYLELGNYLAQKNQIYGAIIIYYLLLEILPIQINIHQQLDQIFRQKNQLEQQLNSFYSAVKTDGNS
QSYYHLGLALTKQQKWLEATIIYHRAIEINPDFAWWSDIRLWETFRKQDKLQKIVDLFQEFISFPNNSLCRYLNLAEALT
QVNRNTEALEIYQNASQQQIQQNYPNFFLKSQKSPQILGPNFLVIGVKKGGTTSIYHYLIQHPQILPGIKKEIDFWSFYF
HRGLDWYRAHFPSIPESEKYLTGEASPSYFDAPDVPARLFHFFPRIKLIVLLRNPVDRTISNYYHEVRSQAESMSIEEVI
NSRLEKLNKISSSFITEKDYWNYQGDYIASSIYLDWLKKWLNIFPREQLLILPSEKFYSQPKTIMKQVFNFLDLPDYQIQ
DYPKFNAASYASISKSLRQKLNDYFQSHNQRLEEYLGIKFGW

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 9 TPR repeats [H]

Homologues:

Organism=Homo sapiens, GI32307150, Length=351, Percent_Identity=27.6353276353276, Blast_Score=119, Evalue=1e-26,
Organism=Homo sapiens, GI32307148, Length=351, Percent_Identity=27.6353276353276, Blast_Score=119, Evalue=1e-26,
Organism=Homo sapiens, GI5174463, Length=267, Percent_Identity=27.7153558052434, Blast_Score=105, Evalue=2e-22,
Organism=Homo sapiens, GI12007650, Length=266, Percent_Identity=27.8195488721804, Blast_Score=103, Evalue=7e-22,
Organism=Homo sapiens, GI4758766, Length=270, Percent_Identity=28.1481481481481, Blast_Score=100, Evalue=3e-21,
Organism=Homo sapiens, GI116089312, Length=267, Percent_Identity=26.5917602996255, Blast_Score=100, Evalue=4e-21,
Organism=Homo sapiens, GI4505353, Length=266, Percent_Identity=27.0676691729323, Blast_Score=100, Evalue=5e-21,
Organism=Homo sapiens, GI5174465, Length=268, Percent_Identity=26.4925373134328, Blast_Score=99, Evalue=2e-20,
Organism=Homo sapiens, GI104876423, Length=195, Percent_Identity=33.3333333333333, Blast_Score=98, Evalue=3e-20,
Organism=Homo sapiens, GI5174467, Length=268, Percent_Identity=26.4925373134328, Blast_Score=97, Evalue=4e-20,
Organism=Homo sapiens, GI45267824, Length=268, Percent_Identity=27.2388059701493, Blast_Score=97, Evalue=6e-20,
Organism=Homo sapiens, GI4826764, Length=271, Percent_Identity=26.1992619926199, Blast_Score=97, Evalue=8e-20,
Organism=Homo sapiens, GI4505351, Length=270, Percent_Identity=25.5555555555556, Blast_Score=87, Evalue=6e-17,
Organism=Homo sapiens, GI301336134, Length=358, Percent_Identity=23.463687150838, Blast_Score=77, Evalue=6e-14,
Organism=Homo sapiens, GI83415184, Length=358, Percent_Identity=23.7430167597765, Blast_Score=77, Evalue=6e-14,
Organism=Caenorhabditis elegans, GI115532690, Length=365, Percent_Identity=26.5753424657534, Blast_Score=117, Evalue=2e-26,
Organism=Caenorhabditis elegans, GI115532692, Length=351, Percent_Identity=27.0655270655271, Blast_Score=117, Evalue=3e-26,
Organism=Caenorhabditis elegans, GI71986098, Length=268, Percent_Identity=25.3731343283582, Blast_Score=98, Evalue=2e-20,
Organism=Caenorhabditis elegans, GI17533853, Length=210, Percent_Identity=28.0952380952381, Blast_Score=92, Evalue=1e-18,
Organism=Caenorhabditis elegans, GI71991175, Length=204, Percent_Identity=29.9019607843137, Blast_Score=92, Evalue=1e-18,
Organism=Saccharomyces cerevisiae, GI6319387, Length=175, Percent_Identity=25.1428571428571, Blast_Score=65, Evalue=3e-11,
Organism=Drosophila melanogaster, GI17647755, Length=351, Percent_Identity=27.3504273504274, Blast_Score=118, Evalue=2e-26,
Organism=Drosophila melanogaster, GI24585827, Length=351, Percent_Identity=27.3504273504274, Blast_Score=118, Evalue=2e-26,
Organism=Drosophila melanogaster, GI24585829, Length=351, Percent_Identity=27.3504273504274, Blast_Score=118, Evalue=2e-26,
Organism=Drosophila melanogaster, GI24643211, Length=267, Percent_Identity=27.3408239700375, Blast_Score=115, Evalue=1e-25,
Organism=Drosophila melanogaster, GI281365711, Length=212, Percent_Identity=29.2452830188679, Blast_Score=83, Evalue=7e-16,
Organism=Drosophila melanogaster, GI17736971, Length=212, Percent_Identity=29.2452830188679, Blast_Score=83, Evalue=7e-16,
Organism=Drosophila melanogaster, GI28573557, Length=116, Percent_Identity=37.9310344827586, Blast_Score=72, Evalue=2e-12,
Organism=Drosophila melanogaster, GI24647123, Length=195, Percent_Identity=26.1538461538462, Blast_Score=66, Evalue=6e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001440
- InterPro:   IPR013026
- InterPro:   IPR011990
- InterPro:   IPR013105
- InterPro:   IPR019734 [H]

Pfam domain/function: PF00515 TPR_1; PF07719 TPR_2 [H]

EC number: NA

Molecular weight: Translated: 80757; Mature: 80757

Theoretical pI: Translated: 8.20; Mature: 8.20

Prosite motif: PS50005 TPR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNYYELGEKFLEQQQWEKAVTSYRQAIKLNPTFSWHYYKLGQALTQLQKWDEAITNYQKA
CCHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
IELNSDFPWSYHHLGNALLKQEKWEEAVNAYHNFIKLNSDNYWAYHKLGEALFKIGEFDA
HCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHHHHHHCHHH
AIISYQKAIKINPEIKGTHQKLADILFHIGQLEAAEIAYRKAIKLNPEVVWYRQCLGDVL
HHHHHHHHEEECCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHH
LRQKRLDEAIATYLEVAKVSHNLTWMHLQLGDAFAQLCQSNLDETINYYCQAIKNPNQYP
HHHHHHHHHHHHHHHHHHHHCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
IYQKSLYLIKTNPEIYLELGNYLAQKNQIYGAIIIYYLLLEILPIQINIHQQLDQIFRQK
CEECEEEEEECCCCEEEHHHHHHHHHCCHHHHHHHHHHHHHHHHHEEEHHHHHHHHHHHH
NQLEQQLNSFYSAVKTDGNSQSYYHLGLALTKQQKWLEATIIYHRAIEINPDFAWWSDIR
HHHHHHHHHHHHHHHCCCCCCCEEEEEEEEHHHHHHHHHHHHEEEEEEECCCCCCHHHHH
LWETFRKQDKLQKIVDLFQEFISFPNNSLCRYLNLAEALTQVNRNTEALEIYQNASQQQI
HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHCCHHHHH
QQNYPNFFLKSQKSPQILGPNFLVIGVKKGGTTSIYHYLIQHPQILPGIKKEIDFWSFYF
HHCCCCCEECCCCCCCEECCCEEEEEECCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHH
HRGLDWYRAHFPSIPESEKYLTGEASPSYFDAPDVPARLFHFFPRIKLIVLLRNPVDRTI
HHCCHHHHHHCCCCCCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHEEHHHCCCHHHHH
SNYYHEVRSQAESMSIEEVINSRLEKLNKISSSFITEKDYWNYQGDYIASSIYLDWLKKW
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHH
LNIFPREQLLILPSEKFYSQPKTIMKQVFNFLDLPDYQIQDYPKFNAASYASISKSLRQK
HHHCCCCCEEEECCHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHH
LNDYFQSHNQRLEEYLGIKFGW
HHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MNYYELGEKFLEQQQWEKAVTSYRQAIKLNPTFSWHYYKLGQALTQLQKWDEAITNYQKA
CCHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
IELNSDFPWSYHHLGNALLKQEKWEEAVNAYHNFIKLNSDNYWAYHKLGEALFKIGEFDA
HCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHHHHHHCHHH
AIISYQKAIKINPEIKGTHQKLADILFHIGQLEAAEIAYRKAIKLNPEVVWYRQCLGDVL
HHHHHHHHEEECCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHH
LRQKRLDEAIATYLEVAKVSHNLTWMHLQLGDAFAQLCQSNLDETINYYCQAIKNPNQYP
HHHHHHHHHHHHHHHHHHHHCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
IYQKSLYLIKTNPEIYLELGNYLAQKNQIYGAIIIYYLLLEILPIQINIHQQLDQIFRQK
CEECEEEEEECCCCEEEHHHHHHHHHCCHHHHHHHHHHHHHHHHHEEEHHHHHHHHHHHH
NQLEQQLNSFYSAVKTDGNSQSYYHLGLALTKQQKWLEATIIYHRAIEINPDFAWWSDIR
HHHHHHHHHHHHHHHCCCCCCCEEEEEEEEHHHHHHHHHHHHEEEEEEECCCCCCHHHHH
LWETFRKQDKLQKIVDLFQEFISFPNNSLCRYLNLAEALTQVNRNTEALEIYQNASQQQI
HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHCCHHHHH
QQNYPNFFLKSQKSPQILGPNFLVIGVKKGGTTSIYHYLIQHPQILPGIKKEIDFWSFYF
HHCCCCCEECCCCCCCEECCCEEEEEECCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHH
HRGLDWYRAHFPSIPESEKYLTGEASPSYFDAPDVPARLFHFFPRIKLIVLLRNPVDRTI
HHCCHHHHHHCCCCCCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHEEHHHCCCHHHHH
SNYYHEVRSQAESMSIEEVINSRLEKLNKISSSFITEKDYWNYQGDYIASSIYLDWLKKW
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHH
LNIFPREQLLILPSEKFYSQPKTIMKQVFNFLDLPDYQIQDYPKFNAASYASISKSLRQK
HHHCCCCCEEEECCHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHH
LNDYFQSHNQRLEEYLGIKFGW
HHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 2105307 [H]