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The map label for this gene is sodA2 [H]

Identifier: 113477925

GI number: 113477925

Start: 6994503

End: 6995267

Strand: Reverse

Name: sodA2 [H]

Synonym: Tery_4533

Alternate gene names: 113477925

Gene position: 6995267-6994503 (Counterclockwise)

Preceding gene: 113477926

Following gene: 113477924

Centisome position: 90.26

GC content: 36.34

Gene sequence:

>765_bases
ATGAATATTAATCGTCGTCATTTCTTGCTTTTACTAAGTACAACTTTAGGGTTTATGACTGTAAGTAGTTGTAAGATATC
ACTAGATAATTCTTCTGGATCTGTAATAGAATCTACTTTACCGAATGATACTAAGTTTTCAGAAAATTTAGGGGTATTTC
AACTAACACCTTTACCTTATGGATATGATGCATTGGAACCTTATATTGATAAGGAAACTATGGGGTTTCACTATGGTAAA
CATTATGCTGGTTATATTAAAAAGTTAAATGGGGCGATCGCTCAATACCCTAAACTTAAGGAGTTTACTGCTGAGGAGCT
ATTGCTTGGTTTGAATAGTTTGCCTCAGGATATTCGTACTGCTGTCAGAAATAATGGTGGTGGTTATGTTAATCATAAAA
TGTTTTGGGAAATTATGGCTCCTAATGGTGGGGGTAAACCTGAAGGAAAAATAGCTGTTGCTATTGATGAGAGTTTTGGT
AATTTTGATGGTTTTAAGGAAAGGTTTAATGCTGCTGGTGCTGCTCGTTTTGGTAGTGGTTGGGTATGGTTGGTTTTGGG
TAATGATGGAAAGTTGAAGGTTATTAGCACTCTTAACCAAGATAGCCCTTTTTTGACTGGGAACTATCCCATTATGGGTA
ATGATGTTTGGGAACATGCTTATTATTTGAGGTATCAAAATCGTCGCCGTGATTATTTGAATGCTTGGTGGAATATTGTT
AATTGGCCGGAGGTTAATCGTAGGTATGAGTTGGCTCTTCGTTAA

Upstream 100 bases:

>100_bases
TGTAAGTGGTTGATAGTATTATAACATTTTTTATATCTAAATTCTCTAAAAATTTATCCGGAATTAATTAAGGTAAATTG
TTGTTTTTGGGTAATTAATA

Downstream 100 bases:

>100_bases
CTTTTAATTGTTAACTTTTAAGGGACTTGCAAAAAAAATTACTAGGATAACTGCAACAAACCCCAAGTTTCTTTTTGGTT
TCAGCTTTCTGGCTATTTAA

Product: superoxide dismutase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 254; Mature: 254

Protein sequence:

>254_residues
MNINRRHFLLLLSTTLGFMTVSSCKISLDNSSGSVIESTLPNDTKFSENLGVFQLTPLPYGYDALEPYIDKETMGFHYGK
HYAGYIKKLNGAIAQYPKLKEFTAEELLLGLNSLPQDIRTAVRNNGGGYVNHKMFWEIMAPNGGGKPEGKIAVAIDESFG
NFDGFKERFNAAGAARFGSGWVWLVLGNDGKLKVISTLNQDSPFLTGNYPIMGNDVWEHAYYLRYQNRRRDYLNAWWNIV
NWPEVNRRYELALR

Sequences:

>Translated_254_residues
MNINRRHFLLLLSTTLGFMTVSSCKISLDNSSGSVIESTLPNDTKFSENLGVFQLTPLPYGYDALEPYIDKETMGFHYGK
HYAGYIKKLNGAIAQYPKLKEFTAEELLLGLNSLPQDIRTAVRNNGGGYVNHKMFWEIMAPNGGGKPEGKIAVAIDESFG
NFDGFKERFNAAGAARFGSGWVWLVLGNDGKLKVISTLNQDSPFLTGNYPIMGNDVWEHAYYLRYQNRRRDYLNAWWNIV
NWPEVNRRYELALR
>Mature_254_residues
MNINRRHFLLLLSTTLGFMTVSSCKISLDNSSGSVIESTLPNDTKFSENLGVFQLTPLPYGYDALEPYIDKETMGFHYGK
HYAGYIKKLNGAIAQYPKLKEFTAEELLLGLNSLPQDIRTAVRNNGGGYVNHKMFWEIMAPNGGGKPEGKIAVAIDESFG
NFDGFKERFNAAGAARFGSGWVWLVLGNDGKLKVISTLNQDSPFLTGNYPIMGNDVWEHAYYLRYQNRRRDYLNAWWNIV
NWPEVNRRYELALR

Specific function: Destroys radicals which are normally produced within the cells and which are toxic to biological systems [H]

COG id: COG0605

COG function: function code P; Superoxide dismutase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the iron/manganese superoxide dismutase family [H]

Homologues:

Organism=Homo sapiens, GI67782307, Length=198, Percent_Identity=44.4444444444444, Blast_Score=171, Evalue=8e-43,
Organism=Homo sapiens, GI67782305, Length=198, Percent_Identity=44.4444444444444, Blast_Score=171, Evalue=8e-43,
Organism=Homo sapiens, GI67782309, Length=198, Percent_Identity=36.3636363636364, Blast_Score=120, Evalue=2e-27,
Organism=Escherichia coli, GI1790342, Length=203, Percent_Identity=47.7832512315271, Blast_Score=208, Evalue=3e-55,
Organism=Escherichia coli, GI1787946, Length=198, Percent_Identity=44.4444444444444, Blast_Score=169, Evalue=1e-43,
Organism=Caenorhabditis elegans, GI17506561, Length=200, Percent_Identity=41, Blast_Score=149, Evalue=2e-36,
Organism=Caenorhabditis elegans, GI17569479, Length=196, Percent_Identity=38.265306122449, Blast_Score=138, Evalue=3e-33,
Organism=Saccharomyces cerevisiae, GI6321796, Length=238, Percent_Identity=38.2352941176471, Blast_Score=158, Evalue=7e-40,
Organism=Drosophila melanogaster, GI17136812, Length=206, Percent_Identity=37.8640776699029, Blast_Score=141, Evalue=4e-34,

Paralogues:

None

Copy number: 2980 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 20 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001189
- InterPro:   IPR019833
- InterPro:   IPR019832
- InterPro:   IPR019831 [H]

Pfam domain/function: PF02777 Sod_Fe_C; PF00081 Sod_Fe_N [H]

EC number: =1.15.1.1 [H]

Molecular weight: Translated: 28824; Mature: 28824

Theoretical pI: Translated: 8.78; Mature: 8.78

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS00088 SOD_MN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNINRRHFLLLLSTTLGFMTVSSCKISLDNSSGSVIESTLPNDTKFSENLGVFQLTPLPY
CCCCCEEEEEEEEHHHHHEEEEEEEEEEECCCCCEEECCCCCCCCCCCCCCEEEECCCCC
GYDALEPYIDKETMGFHYGKHYAGYIKKLNGAIAQYPKLKEFTAEELLLGLNSLPQDIRT
CHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCHHHCCCCHHHHHHHHHHHHHHCCCHHHHH
AVRNNGGGYVNHKMFWEIMAPNGGGKPEGKIAVAIDESFGNFDGFKERFNAAGAARFGSG
HHHCCCCCEECCEEEEEEECCCCCCCCCCEEEEEEECCCCCCHHHHHHHCCCCCCEECCC
WVWLVLGNDGKLKVISTLNQDSPFLTGNYPIMGNDVWEHAYYLRYQNRRRDYLNAWWNIV
EEEEEECCCCCEEEEEECCCCCCEEECCCCCCCCHHHHHHEEEEECHHHHHHHHHHHCCC
NWPEVNRRYELALR
CCCCCCCEEEEEEC
>Mature Secondary Structure
MNINRRHFLLLLSTTLGFMTVSSCKISLDNSSGSVIESTLPNDTKFSENLGVFQLTPLPY
CCCCCEEEEEEEEHHHHHEEEEEEEEEEECCCCCEEECCCCCCCCCCCCCCEEEECCCCC
GYDALEPYIDKETMGFHYGKHYAGYIKKLNGAIAQYPKLKEFTAEELLLGLNSLPQDIRT
CHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCHHHCCCCHHHHHHHHHHHHHHCCCHHHHH
AVRNNGGGYVNHKMFWEIMAPNGGGKPEGKIAVAIDESFGNFDGFKERFNAAGAARFGSG
HHHCCCCCEECCEEEEEEECCCCCCCCCCEEEEEEECCCCCCHHHHHHHCCCCCCEECCC
WVWLVLGNDGKLKVISTLNQDSPFLTGNYPIMGNDVWEHAYYLRYQNRRRDYLNAWWNIV
EEEEEECCCCCEEEEEECCCCCCEEECCCCCCCCHHHHHHEEEEECHHHHHHHHHHHCCC
NWPEVNRRYELALR
CCCCCCCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7860607 [H]