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The map label for this gene is rhdA [H]

Identifier: 113477924

GI number: 113477924

Start: 6991777

End: 6992673

Strand: Reverse

Name: rhdA [H]

Synonym: Tery_4532

Alternate gene names: 113477924

Gene position: 6992673-6991777 (Counterclockwise)

Preceding gene: 113477925

Following gene: 113477923

Centisome position: 90.23

GC content: 46.82

Gene sequence:

>897_bases
ATGTTGAACAAAAAAGTAACCTACAAGACCACGAAAACCACAATGAGTAATAGTATTTTAATTAACCCTGCAGAACTTGC
TGATCTTATAAAGACAGTCCCCTGTGTCATTATCGATACCCGGAGATCCGAAGCCTATGAAGAAAGTCATATTCCGGATG
CGGTAAATTTGCATAATATTTTCACCTATCTGGCGACTTCTACCCCTGAAGGCATAGCAGAATTGAAGGGTAAGTTTGAA
ACTGAATTCGGTGCAGCTGGCCTGTCGGGCAAAGAAACTGCAATCATCTATGAACAATCCATGAACACTGGTTTCGGCCA
GTCTTGCCGTGGCTATTTTCTACTGCAATATCTCGGCTATCCACAAATCAAGGTGCTACACGGCGGCTATGAAGCTTGGA
CTTTAGCTGGAATGCCAACGTCATCGCAAGCTGTCACTCCGGAACCGAAGATATTTCCATCCTCAGAGGCTGGCGCAAGC
CTGATGATGGACACTGCTGATATGCTGGCTGCAGTCAAAGATAAGAGCGTAGTCAAGCTTGACGTTCGTGACATCGACGA
ATGGATTGGAGAAAGCTCTTCACCCTATGGTAAGGATTTCTGCCCACGCAAAGGCCGTATTCCAGAAGCTAAGTGGATCG
AGTGGTATCGGATGATGAAGCCAACCCCAACAGGGTTAATGCTCAAGAACAAGGAAGAAGTCCTTGCAGAATGCGCCACA
GTAGGCATCACACCAGAAACGCCGGTTGCACTTTATTGCTTCAAGGGTGCGCGGGCCTCCAACACCTATCTTGCTCTTAA
AGAGGCAGGTGTGAAGGACGTGAAAATATATTTTGGATCCTGGAATGAATGGTCCCGTGATCCTGCCCTCCCAATTGAAG
AAGGCCTGCCATACTAA

Upstream 100 bases:

>100_bases
TTATTGGTATATGAGGTCTACTGAATTTTATTGCGCTAATGTAATACTTTTTATCTGATGGATTACATTGAATTAACCAG
ACCTCTGTAACAAGAGGAAA

Downstream 100 bases:

>100_bases
CAGATTGCTGAAAAAGTAGATGACAATAGCTCAAGCCTCTGACTTGGAGGGGGCAGATGTTTTATTACCGATGGTGGAAG
CAGAAGCGCTATTAGGGGAT

Product: rhodanese-like protein

Products: NA

Alternate protein names: Rhodanese-like protein [H]

Number of amino acids: Translated: 298; Mature: 298

Protein sequence:

>298_residues
MLNKKVTYKTTKTTMSNSILINPAELADLIKTVPCVIIDTRRSEAYEESHIPDAVNLHNIFTYLATSTPEGIAELKGKFE
TEFGAAGLSGKETAIIYEQSMNTGFGQSCRGYFLLQYLGYPQIKVLHGGYEAWTLAGMPTSSQAVTPEPKIFPSSEAGAS
LMMDTADMLAAVKDKSVVKLDVRDIDEWIGESSSPYGKDFCPRKGRIPEAKWIEWYRMMKPTPTGLMLKNKEEVLAECAT
VGITPETPVALYCFKGARASNTYLALKEAGVKDVKIYFGSWNEWSRDPALPIEEGLPY

Sequences:

>Translated_298_residues
MLNKKVTYKTTKTTMSNSILINPAELADLIKTVPCVIIDTRRSEAYEESHIPDAVNLHNIFTYLATSTPEGIAELKGKFE
TEFGAAGLSGKETAIIYEQSMNTGFGQSCRGYFLLQYLGYPQIKVLHGGYEAWTLAGMPTSSQAVTPEPKIFPSSEAGAS
LMMDTADMLAAVKDKSVVKLDVRDIDEWIGESSSPYGKDFCPRKGRIPEAKWIEWYRMMKPTPTGLMLKNKEEVLAECAT
VGITPETPVALYCFKGARASNTYLALKEAGVKDVKIYFGSWNEWSRDPALPIEEGLPY
>Mature_298_residues
MLNKKVTYKTTKTTMSNSILINPAELADLIKTVPCVIIDTRRSEAYEESHIPDAVNLHNIFTYLATSTPEGIAELKGKFE
TEFGAAGLSGKETAIIYEQSMNTGFGQSCRGYFLLQYLGYPQIKVLHGGYEAWTLAGMPTSSQAVTPEPKIFPSSEAGAS
LMMDTADMLAAVKDKSVVKLDVRDIDEWIGESSSPYGKDFCPRKGRIPEAKWIEWYRMMKPTPTGLMLKNKEEVLAECAT
VGITPETPVALYCFKGARASNTYLALKEAGVKDVKIYFGSWNEWSRDPALPIEEGLPY

Specific function: Unknown

COG id: COG2897

COG function: function code P; Rhodanese-related sulfurtransferase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 rhodanese domains [H]

Homologues:

Organism=Homo sapiens, GI17402865, Length=244, Percent_Identity=27.0491803278689, Blast_Score=74, Evalue=1e-13,
Organism=Escherichia coli, GI87081967, Length=262, Percent_Identity=27.0992366412214, Blast_Score=86, Evalue=4e-18,
Organism=Escherichia coli, GI87082121, Length=293, Percent_Identity=23.5494880546075, Blast_Score=70, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI71997283, Length=249, Percent_Identity=26.5060240963855, Blast_Score=74, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI17561888, Length=266, Percent_Identity=24.0601503759398, Blast_Score=72, Evalue=3e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001763
- InterPro:   IPR001307 [H]

Pfam domain/function: PF00581 Rhodanese [H]

EC number: =2.8.1.1 [H]

Molecular weight: Translated: 32982; Mature: 32982

Theoretical pI: Translated: 5.25; Mature: 5.25

Prosite motif: PS50206 RHODANESE_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLNKKVTYKTTKTTMSNSILINPAELADLIKTVPCVIIDTRRSEAYEESHIPDAVNLHNI
CCCCEEEEEEEEEECCCEEEECHHHHHHHHHHCCEEEEECCCCHHHHHHCCCCCHHHHHH
FTYLATSTPEGIAELKGKFETEFGAAGLSGKETAIIYEQSMNTGFGQSCRGYFLLQYLGY
HHHHHCCCCHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCHHHHHHEECCCC
PQIKVLHGGYEAWTLAGMPTSSQAVTPEPKIFPSSEAGASLMMDTADMLAAVKDKSVVKL
CEEEEEECCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHCCCCEEEE
DVRDIDEWIGESSSPYGKDFCPRKGRIPEAKWIEWYRMMKPTPTGLMLKNKEEVLAECAT
EHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCEEEECHHHHHHHHHH
VGITPETPVALYCFKGARASNTYLALKEAGVKDVKIYFGSWNEWSRDPALPIEEGLPY
CCCCCCCCEEEEEECCCCCCCCEEEEECCCCEEEEEEECCCCCCCCCCCCCHHCCCCC
>Mature Secondary Structure
MLNKKVTYKTTKTTMSNSILINPAELADLIKTVPCVIIDTRRSEAYEESHIPDAVNLHNI
CCCCEEEEEEEEEECCCEEEECHHHHHHHHHHCCEEEEECCCCHHHHHHCCCCCHHHHHH
FTYLATSTPEGIAELKGKFETEFGAAGLSGKETAIIYEQSMNTGFGQSCRGYFLLQYLGY
HHHHHCCCCHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCHHHHHHEECCCC
PQIKVLHGGYEAWTLAGMPTSSQAVTPEPKIFPSSEAGASLMMDTADMLAAVKDKSVVKL
CEEEEEECCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHCCCCEEEE
DVRDIDEWIGESSSPYGKDFCPRKGRIPEAKWIEWYRMMKPTPTGLMLKNKEEVLAECAT
EHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCEEEECHHHHHHHHHH
VGITPETPVALYCFKGARASNTYLALKEAGVKDVKIYFGSWNEWSRDPALPIEEGLPY
CCCCCCCCEEEEEECCCCCCCCEEEEECCCCEEEEEEECCCCCCCCCCCCCHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8617271; 10788330 [H]