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The map label for this gene is hsdM [C]

Identifier: 113477872

GI number: 113477872

Start: 6903599

End: 6905632

Strand: Reverse

Name: hsdM [C]

Synonym: Tery_4473

Alternate gene names: 113477872

Gene position: 6905632-6903599 (Counterclockwise)

Preceding gene: 113477873

Following gene: 113477871

Centisome position: 89.1

GC content: 35.74

Gene sequence:

>2034_bases
ATGGATCAAAATATACATAACGGAATTGTTAGCTTTATTTGGGGAATTGCTGATGATGTTTTACGGGATATTTATGTTAG
GGGAAAATACCGAGATGTGATTCTACCAATGACTGTTATTCGGCGGTTAGATTGTTTGCTTGAACCTACAAAAGCAGCAG
TTTTAAAAGAGAATAATTTTTATGAAAATATGGAAATTTCTGATAAATCTGGATTAACAGAATTTACTAAATATCCTTTT
TATAATACTTCTGGATTTACTCTTAAAAAATTACTGGATGAACCTAGGTCTATCAAGGAAAATTTGATAGATTATCTGAA
TGGTTTTAGTGACAATGTACAGGAAATTATTAATAAGTTTAAGTTCCGCAACCAGTTAGAAACTTTGGTAGAACATAAGC
GCCTTTATGCTTTAATTCAAAAGTTTACTGACTCAGATATTAATCTCAGTCCCGAACCGAGAAAAGATAAAAAAGGTAAG
GTTATTCAACCTGGTTTATCTAATTTGGGTATGGGTTATGTTTTTGAGGAATTAATTAGAAAATTTAATGAGGAAAATAA
CGAAGAGGCAGGAGAACATTTTACTCCCCGCGATATTATTAAGTTGATGGTTAATTTGATTTTTATGCCTGTGAAAGACC
AGATTAAAAATACTACTTATTTAGTTTATGACTGTGCTTGTGGTTCTGGGGGAATGTTGACAGAAGCAGAAAATTTTTTG
CTGGAGTTAGCAACAGGAATGGGGAAAAAAGTAGTCATTCATTTATTTGGGCAAGAGGTTAATCCTGAGACTTATGCTAT
CTGTCAGGCGGATATGTTAATTAAGGTAAAAGAAACCGATAATATTAAGTATGCTTCGACTCTTGCTAGTGATGGTTTTC
CGGATTTTACTTTTGATTTTATGTTGGCTAATCCTCCTTATGGAAAATCTTGGAAGGTCGATCAGGATAAAATTTTAGTG
GGGAGAAAAAAGGAGGTTAAAGATAATAGGTTTTTGGTTAAACATCAGGGGGAAGAATTACAACTTATTCCCCGCAGTAG
TGACGGGCAATTATTATTTTTGGTCAATAAACTTTCTAAAATGAAAGACTCGACAAAGTTGGGAAGTCGGATAGCAATTG
TTCATAATGGTTCGGCTTTATTTACGGGAGATGCTGGTAGTGGGGAGAGTAATATTCGCCGTTGGATTATTGAAAATGAT
TGGTTGGAATGTATTGTTGGTTTGCCGTTAAATATGTTTTATAACACTGGTATTGCTACTTATATTTGGATTATTTCTAA
TAAAAAATCTGTGGAGCGTCGGGGTAAGGTGCAGTTGATAGATGGGAGGGAATGGTATGGGAAATTAAGGAAAAGTTTGG
GGAGTAAAAGTTGTGAGTTACGGGGGGAAGATATTGACAGGATAACTGAGGAGTTTTTGGATTTTTCGGAGTCGGATAAT
AGTCGAATTTTTGATAATGAGGATTTTGGTTTTCATAAGATTGTTGTGGAGAGACCTTTGCGTTTTAGTTTTCAAGTTAC
GGCGGCAAGGGTTCAGGAATTTGGTGAAAAAATGGGGGATGATTTGTTGGGAGTGGTGGATATTTTGCGGGGGTTATTTG
GTGAGGAGGTGCAGTGGGATTTTAATTTGGTGAAGAGAGATTTTGAGAAGGCGTTGAAGGTGGAGGGGTGGAATTTGAAA
AAGCGAGATTTGGATTTGATTTATCAAATTTTTACTGAGAAGGATGAGCGAGGAGAGGCTGTTATTTTGAAGCAGACAAA
AAAGGGAGTTGTTTATCAAGCAGATGCGGAATTGAGGGATACTGAAAATGTGCCTTTGAAGGAGAATATTCAGGAGTATT
TTGAGAGGGAAGTTTTGCCTCATGTTTCTGATGCTTGGATAGATTTTGATAAAGTGGTGAGGGGTTATGAGATTTCGTTT
ACTAAGTATTTTTATAAATTTCAGAAGTTGCGGAGTTTGGAGGATATTGTGGAGGAACTTTTGGAGTTGGAAAAAGAGAC
AGAGGGAATATTGAGAGAGATTGTTTTTGAGTAG

Upstream 100 bases:

>100_bases
TGAATAATGATATTGTCGCCCTGCATTGTTTTAGTTTCTGTCGAACTAATGATAAAATTAAAAAATTTACTTTAGTTACT
TTTCACTAAAAATAACACAA

Downstream 100 bases:

>100_bases
TAGGAATTGTAGGGAGGTTGTATGCAATTTCCCTACAGATTTATAATTTTAGGAGGGGAGAATAGGTAGATTATCTATTG
GGGAAAATTTGAGTTTTTTA

Product: N-6 DNA methylase

Products: NA

Alternate protein names: M.MjaXP [H]

Number of amino acids: Translated: 677; Mature: 677

Protein sequence:

>677_residues
MDQNIHNGIVSFIWGIADDVLRDIYVRGKYRDVILPMTVIRRLDCLLEPTKAAVLKENNFYENMEISDKSGLTEFTKYPF
YNTSGFTLKKLLDEPRSIKENLIDYLNGFSDNVQEIINKFKFRNQLETLVEHKRLYALIQKFTDSDINLSPEPRKDKKGK
VIQPGLSNLGMGYVFEELIRKFNEENNEEAGEHFTPRDIIKLMVNLIFMPVKDQIKNTTYLVYDCACGSGGMLTEAENFL
LELATGMGKKVVIHLFGQEVNPETYAICQADMLIKVKETDNIKYASTLASDGFPDFTFDFMLANPPYGKSWKVDQDKILV
GRKKEVKDNRFLVKHQGEELQLIPRSSDGQLLFLVNKLSKMKDSTKLGSRIAIVHNGSALFTGDAGSGESNIRRWIIEND
WLECIVGLPLNMFYNTGIATYIWIISNKKSVERRGKVQLIDGREWYGKLRKSLGSKSCELRGEDIDRITEEFLDFSESDN
SRIFDNEDFGFHKIVVERPLRFSFQVTAARVQEFGEKMGDDLLGVVDILRGLFGEEVQWDFNLVKRDFEKALKVEGWNLK
KRDLDLIYQIFTEKDERGEAVILKQTKKGVVYQADAELRDTENVPLKENIQEYFEREVLPHVSDAWIDFDKVVRGYEISF
TKYFYKFQKLRSLEDIVEELLELEKETEGILREIVFE

Sequences:

>Translated_677_residues
MDQNIHNGIVSFIWGIADDVLRDIYVRGKYRDVILPMTVIRRLDCLLEPTKAAVLKENNFYENMEISDKSGLTEFTKYPF
YNTSGFTLKKLLDEPRSIKENLIDYLNGFSDNVQEIINKFKFRNQLETLVEHKRLYALIQKFTDSDINLSPEPRKDKKGK
VIQPGLSNLGMGYVFEELIRKFNEENNEEAGEHFTPRDIIKLMVNLIFMPVKDQIKNTTYLVYDCACGSGGMLTEAENFL
LELATGMGKKVVIHLFGQEVNPETYAICQADMLIKVKETDNIKYASTLASDGFPDFTFDFMLANPPYGKSWKVDQDKILV
GRKKEVKDNRFLVKHQGEELQLIPRSSDGQLLFLVNKLSKMKDSTKLGSRIAIVHNGSALFTGDAGSGESNIRRWIIEND
WLECIVGLPLNMFYNTGIATYIWIISNKKSVERRGKVQLIDGREWYGKLRKSLGSKSCELRGEDIDRITEEFLDFSESDN
SRIFDNEDFGFHKIVVERPLRFSFQVTAARVQEFGEKMGDDLLGVVDILRGLFGEEVQWDFNLVKRDFEKALKVEGWNLK
KRDLDLIYQIFTEKDERGEAVILKQTKKGVVYQADAELRDTENVPLKENIQEYFEREVLPHVSDAWIDFDKVVRGYEISF
TKYFYKFQKLRSLEDIVEELLELEKETEGILREIVFE
>Mature_677_residues
MDQNIHNGIVSFIWGIADDVLRDIYVRGKYRDVILPMTVIRRLDCLLEPTKAAVLKENNFYENMEISDKSGLTEFTKYPF
YNTSGFTLKKLLDEPRSIKENLIDYLNGFSDNVQEIINKFKFRNQLETLVEHKRLYALIQKFTDSDINLSPEPRKDKKGK
VIQPGLSNLGMGYVFEELIRKFNEENNEEAGEHFTPRDIIKLMVNLIFMPVKDQIKNTTYLVYDCACGSGGMLTEAENFL
LELATGMGKKVVIHLFGQEVNPETYAICQADMLIKVKETDNIKYASTLASDGFPDFTFDFMLANPPYGKSWKVDQDKILV
GRKKEVKDNRFLVKHQGEELQLIPRSSDGQLLFLVNKLSKMKDSTKLGSRIAIVHNGSALFTGDAGSGESNIRRWIIEND
WLECIVGLPLNMFYNTGIATYIWIISNKKSVERRGKVQLIDGREWYGKLRKSLGSKSCELRGEDIDRITEEFLDFSESDN
SRIFDNEDFGFHKIVVERPLRFSFQVTAARVQEFGEKMGDDLLGVVDILRGLFGEEVQWDFNLVKRDFEKALKVEGWNLK
KRDLDLIYQIFTEKDERGEAVILKQTKKGVVYQADAELRDTENVPLKENIQEYFEREVLPHVSDAWIDFDKVVRGYEISF
TKYFYKFQKLRSLEDIVEELLELEKETEGILREIVFE

Specific function: Methylation of specific adenine residues; required for both restriction and modification activities [H]

COG id: COG0286

COG function: function code V; Type I restriction-modification system methyltransferase subunit

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the N(4)/N(6)-methyltransferase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022749
- InterPro:   IPR003356
- InterPro:   IPR002052
- InterPro:   IPR002296 [H]

Pfam domain/function: PF12161 HsdM_N; PF02384 N6_Mtase [H]

EC number: =2.1.1.72 [H]

Molecular weight: Translated: 78393; Mature: 78393

Theoretical pI: Translated: 5.02; Mature: 5.02

Prosite motif: PS00092 N6_MTASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDQNIHNGIVSFIWGIADDVLRDIYVRGKYRDVILPMTVIRRLDCLLEPTKAAVLKENNF
CCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHEHHHHHHHHHHHHHHCCCHHHHEECCCC
YENMEISDKSGLTEFTKYPFYNTSGFTLKKLLDEPRSIKENLIDYLNGFSDNVQEIINKF
CCCCCCCCCCCCHHHHHCCCCCCCCCHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHH
KFRNQLETLVEHKRLYALIQKFTDSDINLSPEPRKDKKGKVIQPGLSNLGMGYVFEELIR
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEECCCHHHCCHHHHHHHHHH
KFNEENNEEAGEHFTPRDIIKLMVNLIFMPVKDQIKNTTYLVYDCACGSGGMLTEAENFL
HHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHCCCEEEEEEECCCCCCCCHHHHHHH
LELATGMGKKVVIHLFGQEVNPETYAICQADMLIKVKETDNIKYASTLASDGFPDFTFDF
HHHHHCCCCEEEEEEECCCCCCCEEEEEEECEEEEEECCCCEEHHHHHHCCCCCCCEEEE
MLANPPYGKSWKVDQDKILVGRKKEVKDNRFLVKHQGEELQLIPRSSDGQLLFLVNKLSK
EEECCCCCCCCCCCCCCEEECCCCCCCCCEEEEEECCCEEEEEECCCCCCEEEEEHHHHH
MKDSTKLGSRIAIVHNGSALFTGDAGSGESNIRRWIIENDWLECIVGLPLNMFYNTGIAT
HHHHHHCCCEEEEEECCCEEEECCCCCCCCHHEEEEECCCHHHHHHCCCHHHHHCCCCEE
YIWIISNKKSVERRGKVQLIDGREWYGKLRKSLGSKSCELRGEDIDRITEEFLDFSESDN
EEEEECCCHHHHHCCCEEEECCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCC
SRIFDNEDFGFHKIVVERPLRFSFQVTAARVQEFGEKMGDDLLGVVDILRGLFGEEVQWD
CCCCCCCCCCCEEHEECCCCCEEEEHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCCHH
FNLVKRDFEKALKVEGWNLKKRDLDLIYQIFTEKDERGEAVILKQTKKGVVYQADAELRD
HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEEECCCCEEEECCCCCCC
TENVPLKENIQEYFEREVLPHVSDAWIDFDKVVRGYEISFTKYFYKFQKLRSLEDIVEEL
CCCCCHHHHHHHHHHHHHCCCCHHHHCCHHHHHCCCEEHHHHHHHHHHHHHHHHHHHHHH
LELEKETEGILREIVFE
HHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MDQNIHNGIVSFIWGIADDVLRDIYVRGKYRDVILPMTVIRRLDCLLEPTKAAVLKENNF
CCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHEHHHHHHHHHHHHHHCCCHHHHEECCCC
YENMEISDKSGLTEFTKYPFYNTSGFTLKKLLDEPRSIKENLIDYLNGFSDNVQEIINKF
CCCCCCCCCCCCHHHHHCCCCCCCCCHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHH
KFRNQLETLVEHKRLYALIQKFTDSDINLSPEPRKDKKGKVIQPGLSNLGMGYVFEELIR
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEECCCHHHCCHHHHHHHHHH
KFNEENNEEAGEHFTPRDIIKLMVNLIFMPVKDQIKNTTYLVYDCACGSGGMLTEAENFL
HHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHCCCEEEEEEECCCCCCCCHHHHHHH
LELATGMGKKVVIHLFGQEVNPETYAICQADMLIKVKETDNIKYASTLASDGFPDFTFDF
HHHHHCCCCEEEEEEECCCCCCCEEEEEEECEEEEEECCCCEEHHHHHHCCCCCCCEEEE
MLANPPYGKSWKVDQDKILVGRKKEVKDNRFLVKHQGEELQLIPRSSDGQLLFLVNKLSK
EEECCCCCCCCCCCCCCEEECCCCCCCCCEEEEEECCCEEEEEECCCCCCEEEEEHHHHH
MKDSTKLGSRIAIVHNGSALFTGDAGSGESNIRRWIIENDWLECIVGLPLNMFYNTGIAT
HHHHHHCCCEEEEEECCCEEEECCCCCCCCHHEEEEECCCHHHHHHCCCHHHHHCCCCEE
YIWIISNKKSVERRGKVQLIDGREWYGKLRKSLGSKSCELRGEDIDRITEEFLDFSESDN
EEEEECCCHHHHHCCCEEEECCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCC
SRIFDNEDFGFHKIVVERPLRFSFQVTAARVQEFGEKMGDDLLGVVDILRGLFGEEVQWD
CCCCCCCCCCCEEHEECCCCCEEEEHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCCHH
FNLVKRDFEKALKVEGWNLKKRDLDLIYQIFTEKDERGEAVILKQTKKGVVYQADAELRD
HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEEECCCCEEEECCCCCCC
TENVPLKENIQEYFEREVLPHVSDAWIDFDKVVRGYEISFTKYFYKFQKLRSLEDIVEEL
CCCCCHHHHHHHHHHHHHCCCCHHHHCCHHHHHCCCEEHHHHHHHHHHHHHHHHHHHHHH
LELEKETEGILREIVFE
HHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]