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The map label for this gene is 113477871

Identifier: 113477871

GI number: 113477871

Start: 6902230

End: 6903477

Strand: Reverse

Name: 113477871

Synonym: Tery_4472

Alternate gene names: NA

Gene position: 6903477-6902230 (Counterclockwise)

Preceding gene: 113477872

Following gene: 113477870

Centisome position: 89.08

GC content: 32.13

Gene sequence:

>1248_bases
ATGGTTAATTTTAATTGGCAAAAATATCCGGTTTATAAAAGTTCTGGTGTTGAATGGTTAGGAGAAATACCGGAACATTG
GGAGATGAAAAGACTAAAGTTTATATCTCATCTTGTTTATGGTGACTCTCTAGGTTCAGAAAATAGAGAAGACGGTAATA
TTAATGTATATGGTTCTAATGGAATGATAGGTCTGCATTCAAAAGCGAATACTCTTTCACCAGTAATTATTGTTGGTAGA
AAAGGTTCTTTTGGTAAAATTCAATATTCTTTGTTTCCTTGTTTTTGTATTGATACAGCTTATTTGATTGACCAAAGAAA
AACCAAACAAAATCTCAAATGGTTATGCTATGCTCTACAAATATTAGAGCTTGATAAAATTTCCCAAGATACAGGTGTAC
CAGGGTTATCTCGCGAAAAAGCTTATCAAAAATTAGTTCCAGTTTCTCCCCTTTCAGAACAACAAGCGATCGCTAATTTC
CTAGACGAAAAACTCGCCCAAATAGATGAATATATTGCCAAAAAACAACGGATAATAGAACTACTAAAAGAACAGAAAAC
TGTTATTATTAATCAGGCAGTTACTAAAGGTATTAACCCAGATGTTTCGATGAAATATTCTGGTATTGAATGGTTAGGAG
AAGTACCGGAACATTGGGAGGTTTTACCAGCATTTGCAGTTTTCAAAGAGCAATGTGTAATCAACAGAGACTTAGTTGAA
AAAAATCTTTTGTCTCTTAGCTACGGTAAAATAATAAGAAAAAGTTTTACTAACAATTTTGGTTTACTTCCAGAGTCTTT
TGAAACTTACCAAATAGTCACACCTGGTAATATAATACTAAGACTAACAGACTTGCAAAACGATAAAAGAAGTTTGAGAG
TAGGGTTGGTTAAAGAAAAAGGAATAATAACATCTGCTTACCTTTGTTTAAACCCTCAAAACGTAATTCCAGAATATGTG
TATACCCTACTTCACATCTATGATATTTTGAAAATTTTTTATTCTATGGGAAGCGGTGTAAGACAGAATATGAAATTTAA
AGACCTCAAAAGACTTCCTATTACTTTTCCTCCAGTTTCTGAACAAAAAGAAATAGTGTCATTCATTGAAAAAAAATTAG
AAAAAATTGAGCGATCGCTCACCGTAATAGAAAAGGAAATAAAATTAATCCAAGAATATCGAACAACTCTAATTTCTGAA
ACAGTAACAGGCAAAATAGACGTTAGAAAATATCATCCTCCCCAATAA

Upstream 100 bases:

>100_bases
ATGCAATTTCCCTACAGATTTATAATTTTAGGAGGGGAGAATAGGTAGATTATCTATTGGGGAAAATTTGAGTTTTTTAA
CTAGGAGATTTTGAGAAAAT

Downstream 100 bases:

>100_bases
ATTCACTCATGGCAACCATAACGGACCGAAGCTATAATGTAGTAGGCTGGGTTGCCCTCAAGTTAACCCAACAAAAAGCC
AATTTTCTATATCTATATCT

Product: restriction modification system DNA specificity subunit

Products: NA

Alternate protein names: Restriction System DNA Specificity Domain Protein; Type I Restriction- System Specificity Subunit; Type I Restriction- System S Subunit; Type I Restriction- System Specificity Determinant; Restriction Endonuclease S Subunit; Type I Restriction S Subunit; Type I Restriction- System; Type I Site-Specific Restriction- System S Subunit; Type I Restriction DNA Specificity Domain Protein; Restriction System DNA Specificity Domain; Type I Restriction-; Type I Restriction Specificity Protein; Type I Site-Specific Deoxyribonuclease; Restriction Endonuclease S Subunits; Type I Restriction- Subunit S; Type I Restriction EcoEI Specificity Protein; Type I Restriction- System Specifity Subunit; Restriction Endonuclease S Subunits-Like; Type I Restriction System DNA Specificity Domain Protein; HsdS Protein; Type I Restriction DNA Specificity Protein; Type I DNA Specificity S Subunit; Type I Restriction- Methylase S Subunit; Type I Restriction Specificity Subunit; Type I Restriction-Mod; Type I Restriction- System Specificity Determinant Protein; Restriction System Type I; Type I Restriction System Specificity Protein HsdS; Type I Restriction Protein S; Type I Restriction- System Subunit S; Type I Restriction- System Specificity Subunit S; Restriction Endonuclease S Subunits-Like Protein; N-6 DNA Methylase; Type 1 Restriction- System Endonuclease Subunit

Number of amino acids: Translated: 415; Mature: 415

Protein sequence:

>415_residues
MVNFNWQKYPVYKSSGVEWLGEIPEHWEMKRLKFISHLVYGDSLGSENREDGNINVYGSNGMIGLHSKANTLSPVIIVGR
KGSFGKIQYSLFPCFCIDTAYLIDQRKTKQNLKWLCYALQILELDKISQDTGVPGLSREKAYQKLVPVSPLSEQQAIANF
LDEKLAQIDEYIAKKQRIIELLKEQKTVIINQAVTKGINPDVSMKYSGIEWLGEVPEHWEVLPAFAVFKEQCVINRDLVE
KNLLSLSYGKIIRKSFTNNFGLLPESFETYQIVTPGNIILRLTDLQNDKRSLRVGLVKEKGIITSAYLCLNPQNVIPEYV
YTLLHIYDILKIFYSMGSGVRQNMKFKDLKRLPITFPPVSEQKEIVSFIEKKLEKIERSLTVIEKEIKLIQEYRTTLISE
TVTGKIDVRKYHPPQ

Sequences:

>Translated_415_residues
MVNFNWQKYPVYKSSGVEWLGEIPEHWEMKRLKFISHLVYGDSLGSENREDGNINVYGSNGMIGLHSKANTLSPVIIVGR
KGSFGKIQYSLFPCFCIDTAYLIDQRKTKQNLKWLCYALQILELDKISQDTGVPGLSREKAYQKLVPVSPLSEQQAIANF
LDEKLAQIDEYIAKKQRIIELLKEQKTVIINQAVTKGINPDVSMKYSGIEWLGEVPEHWEVLPAFAVFKEQCVINRDLVE
KNLLSLSYGKIIRKSFTNNFGLLPESFETYQIVTPGNIILRLTDLQNDKRSLRVGLVKEKGIITSAYLCLNPQNVIPEYV
YTLLHIYDILKIFYSMGSGVRQNMKFKDLKRLPITFPPVSEQKEIVSFIEKKLEKIERSLTVIEKEIKLIQEYRTTLISE
TVTGKIDVRKYHPPQ
>Mature_415_residues
MVNFNWQKYPVYKSSGVEWLGEIPEHWEMKRLKFISHLVYGDSLGSENREDGNINVYGSNGMIGLHSKANTLSPVIIVGR
KGSFGKIQYSLFPCFCIDTAYLIDQRKTKQNLKWLCYALQILELDKISQDTGVPGLSREKAYQKLVPVSPLSEQQAIANF
LDEKLAQIDEYIAKKQRIIELLKEQKTVIINQAVTKGINPDVSMKYSGIEWLGEVPEHWEVLPAFAVFKEQCVINRDLVE
KNLLSLSYGKIIRKSFTNNFGLLPESFETYQIVTPGNIILRLTDLQNDKRSLRVGLVKEKGIITSAYLCLNPQNVIPEYV
YTLLHIYDILKIFYSMGSGVRQNMKFKDLKRLPITFPPVSEQKEIVSFIEKKLEKIERSLTVIEKEIKLIQEYRTTLISE
TVTGKIDVRKYHPPQ

Specific function: Unknown

COG id: COG0732

COG function: function code V; Restriction endonuclease S subunits

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 47717; Mature: 47717

Theoretical pI: Translated: 9.19; Mature: 9.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVNFNWQKYPVYKSSGVEWLGEIPEHWEMKRLKFISHLVYGDSLGSENREDGNINVYGSN
CCCCCCCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECC
GMIGLHSKANTLSPVIIVGRKGSFGKIQYSLFPCFCIDTAYLIDQRKTKQNLKWLCYALQ
CEEEECCCCCCCCCEEEEECCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ILELDKISQDTGVPGLSREKAYQKLVPVSPLSEQQAIANFLDEKLAQIDEYIAKKQRIIE
HHHHHHCCCCCCCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLKEQKTVIINQAVTKGINPDVSMKYSGIEWLGEVPEHWEVLPAFAVFKEQCVINRDLVE
HHHHHHHEEEHHHHHCCCCCCCEEEECCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
KNLLSLSYGKIIRKSFTNNFGLLPESFETYQIVTPGNIILRLTDLQNDKRSLRVGLVKEK
HHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCEEEEEECCCCCCHHHEEEEEECC
GIITSAYLCLNPQNVIPEYVYTLLHIYDILKIFYSMGSGVRQNMKFKDLKRLPITFPPVS
CCEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCHHHHHCCCCCCCCCC
EQKEIVSFIEKKLEKIERSLTVIEKEIKLIQEYRTTLISETVTGKIDVRKYHPPQ
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCC
>Mature Secondary Structure
MVNFNWQKYPVYKSSGVEWLGEIPEHWEMKRLKFISHLVYGDSLGSENREDGNINVYGSN
CCCCCCCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECC
GMIGLHSKANTLSPVIIVGRKGSFGKIQYSLFPCFCIDTAYLIDQRKTKQNLKWLCYALQ
CEEEECCCCCCCCCEEEEECCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ILELDKISQDTGVPGLSREKAYQKLVPVSPLSEQQAIANFLDEKLAQIDEYIAKKQRIIE
HHHHHHCCCCCCCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLKEQKTVIINQAVTKGINPDVSMKYSGIEWLGEVPEHWEVLPAFAVFKEQCVINRDLVE
HHHHHHHEEEHHHHHCCCCCCCEEEECCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
KNLLSLSYGKIIRKSFTNNFGLLPESFETYQIVTPGNIILRLTDLQNDKRSLRVGLVKEK
HHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCEEEEEECCCCCCHHHEEEEEECC
GIITSAYLCLNPQNVIPEYVYTLLHIYDILKIFYSMGSGVRQNMKFKDLKRLPITFPPVS
CCEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCHHHHHCCCCCCCCCC
EQKEIVSFIEKKLEKIERSLTVIEKEIKLIQEYRTTLISETVTGKIDVRKYHPPQ
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA