| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is 113477825
Identifier: 113477825
GI number: 113477825
Start: 6820627
End: 6821148
Strand: Reverse
Name: 113477825
Synonym: Tery_4425
Alternate gene names: NA
Gene position: 6821148-6820627 (Counterclockwise)
Preceding gene: 113477826
Following gene: 113477824
Centisome position: 88.01
GC content: 39.46
Gene sequence:
>522_bases ATGTCCCTCGATGAACTAAAGCTGCGTGTTGCTAAACGAGCAGATGTATCTATTCTATTTGACTTAATTAAGGCCCTAGC TGAGTATGAAAATTTATCTCATGCTGTTACAGGTAATGTTGCTTCCTTGGAAGCTCATTTATTTGGCGAACCTGATAGCG ATAGATCCAATTATCGTCCCATGGCTGAAGCCATTATTGCTGAATTGACAGGCAAACCTGTCGGTTTTTCTTTATTCTTT TATAACTATTCAACTTTTTTAACCCAACCCGGTATTTATATTGAAGATTTATTTGTGTTACCTGATTATAGAGGGCGGGG TATAGGAAAGCGACTGATCAGTTATTTGGCCCAGTTGGCAGTATCCCAAAATTGTGGACGTTTAGAATGGAGCGTTTTAG ATTGGAATAAACCTGCGATCGGATTTTATAAACATATGGGTGCGTCAATTTTAGACGAGTGGCGTATCTGTCGTGTTACT GACAATGCTCTCGGGAAGTTAGCATCTCAACAGGAATTATAG
Upstream 100 bases:
>100_bases ATCATATCGCTGTCAGCTAAAGTCCCAACGATTTGTCGTCAAGAACTCCAATTTTATCAATATCCTAACACTTTTTTATA GTGCTATAGTAGTTAAATTT
Downstream 100 bases:
>100_bases CTGAAGTTAAAAGTTAAATCATTTCTGTGCTTCAGGCAAAAGAAGATCGAGAATGTCCGAAGGGTAGTAGAAATTGCTAT ATCAGATTTAAGATCAAAAT
Product: GCN5-like N-acetyltransferase
Products: NA
Alternate protein names: Acetyltransferase; N-Acetyltransferase; Acetyltransferase GNAT Family; GNAT Family Acetyltransferase; Diamine N-Acetyltransferase; GCN5-Like N-Acetyltransferase; Acetyltransferase Family Protein; Diamine Acetyltransferase; Acetyltransferase Protein; Histone Acetyltransferase HPA2-Like Acetyltransferase; Acetyltransferase GNAT Family Protein; Histone Acetyltransferase HPA; Gcn5-Related N-Acetyltransferase; ACETYLTRANSFERASE GCN5-Related N-Acetyltransferase; Gnat Acetyltransferase; Sortase-Like Acyltransferase; Spermidine/Spermine N1-Acetyl Transferase; N-Acetyltransferase Protein; GNAT-Family Acetyltransferase; LOW QUALITY PROTEIN Acetyltransferase; Argininosuccinate Synthase
Number of amino acids: Translated: 173; Mature: 172
Protein sequence:
>173_residues MSLDELKLRVAKRADVSILFDLIKALAEYENLSHAVTGNVASLEAHLFGEPDSDRSNYRPMAEAIIAELTGKPVGFSLFF YNYSTFLTQPGIYIEDLFVLPDYRGRGIGKRLISYLAQLAVSQNCGRLEWSVLDWNKPAIGFYKHMGASILDEWRICRVT DNALGKLASQQEL
Sequences:
>Translated_173_residues MSLDELKLRVAKRADVSILFDLIKALAEYENLSHAVTGNVASLEAHLFGEPDSDRSNYRPMAEAIIAELTGKPVGFSLFF YNYSTFLTQPGIYIEDLFVLPDYRGRGIGKRLISYLAQLAVSQNCGRLEWSVLDWNKPAIGFYKHMGASILDEWRICRVT DNALGKLASQQEL >Mature_172_residues SLDELKLRVAKRADVSILFDLIKALAEYENLSHAVTGNVASLEAHLFGEPDSDRSNYRPMAEAIIAELTGKPVGFSLFFY NYSTFLTQPGIYIEDLFVLPDYRGRGIGKRLISYLAQLAVSQNCGRLEWSVLDWNKPAIGFYKHMGASILDEWRICRVTD NALGKLASQQEL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI19424126, Length=176, Percent_Identity=33.5227272727273, Blast_Score=102, Evalue=2e-22, Organism=Homo sapiens, GI4506789, Length=175, Percent_Identity=32.5714285714286, Blast_Score=97, Evalue=7e-21, Organism=Caenorhabditis elegans, GI17559148, Length=155, Percent_Identity=32.258064516129, Blast_Score=81, Evalue=3e-16, Organism=Drosophila melanogaster, GI24647013, Length=181, Percent_Identity=29.8342541436464, Blast_Score=82, Evalue=3e-16, Organism=Drosophila melanogaster, GI24647015, Length=103, Percent_Identity=39.8058252427184, Blast_Score=75, Evalue=2e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19450; Mature: 19319
Theoretical pI: Translated: 5.71; Mature: 5.71
Prosite motif: PS00014 ER_TARGET
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLDELKLRVAKRADVSILFDLIKALAEYENLSHAVTGNVASLEAHLFGEPDSDRSNYRP CCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCHHHCCCHHEEEEEECCCCCCCCCCCCH MAEAIIAELTGKPVGFSLFFYNYSTFLTQPGIYIEDLFVLPDYRGRGIGKRLISYLAQLA HHHHHHHHHCCCCCEEEEEEECHHHHHCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHH VSQNCGRLEWSVLDWNKPAIGFYKHMGASILDEWRICRVTDNALGKLASQQEL HHCCCCCEEEEEECCCCCCHHHHHHHCHHHHHCCCEEEECHHHHHHHHHCCCC >Mature Secondary Structure SLDELKLRVAKRADVSILFDLIKALAEYENLSHAVTGNVASLEAHLFGEPDSDRSNYRP CHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCHHHCCCHHEEEEEECCCCCCCCCCCCH MAEAIIAELTGKPVGFSLFFYNYSTFLTQPGIYIEDLFVLPDYRGRGIGKRLISYLAQLA HHHHHHHHHCCCCCEEEEEEECHHHHHCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHH VSQNCGRLEWSVLDWNKPAIGFYKHMGASILDEWRICRVTDNALGKLASQQEL HHCCCCCEEEEEECCCCCCHHHHHHHCHHHHHCCCEEEECHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA