| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is 113477824
Identifier: 113477824
GI number: 113477824
Start: 6819987
End: 6820193
Strand: Reverse
Name: 113477824
Synonym: Tery_4424
Alternate gene names: NA
Gene position: 6820193-6819987 (Counterclockwise)
Preceding gene: 113477825
Following gene: 113477823
Centisome position: 88.0
GC content: 34.78
Gene sequence:
>207_bases ATGACTATTTGGGTAAATGAACAGATAGATCCATCTGGTATTGTCTACTCTTGTATTGCCTGTTGTGAGAAATTGCAAGC CCAAGAATGCCATGAATCTTTTAAAAAAAATTTAACTGATACTCAAAAAGAACAAGGATGGAAAGCTACATTGCGAATTG TTGAGTCTTGGGATGATGTGCCTGTTAGTGCTTTAAAATTGAATTGA
Upstream 100 bases:
>100_bases TTATAGCTTTAAGCCTTTGGGGTTTGAACTATCAGCTCAAGTTAAAACTATTAGGTTGTAGAGGATTTCAATTGAAAAAT ATATACTGAGGTTATTAACT
Downstream 100 bases:
>100_bases ACTTTCAAATTTTGATTAGTACTTTTTTTCTATGAGTCAAAATATGAGCTATATGAACTACTTATAATTTCTTGGGTTTG GCAAGGTTGTCTAAATTGGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 68; Mature: 67
Protein sequence:
>68_residues MTIWVNEQIDPSGIVYSCIACCEKLQAQECHESFKKNLTDTQKEQGWKATLRIVESWDDVPVSALKLN
Sequences:
>Translated_68_residues MTIWVNEQIDPSGIVYSCIACCEKLQAQECHESFKKNLTDTQKEQGWKATLRIVESWDDVPVSALKLN >Mature_67_residues TIWVNEQIDPSGIVYSCIACCEKLQAQECHESFKKNLTDTQKEQGWKATLRIVESWDDVPVSALKLN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7771; Mature: 7640
Theoretical pI: Translated: 4.65; Mature: 4.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.9 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 7.4 %Cys+Met (Translated Protein) 6.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 6.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTIWVNEQIDPSGIVYSCIACCEKLQAQECHESFKKNLTDTQKEQGWKATLRIVESWDDV CEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCHHHHHHHHHCCCCC PVSALKLN CCEEEECC >Mature Secondary Structure TIWVNEQIDPSGIVYSCIACCEKLQAQECHESFKKNLTDTQKEQGWKATLRIVESWDDV EEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCHHHHHHHHHCCCCC PVSALKLN CCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA