Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113477768

Identifier: 113477768

GI number: 113477768

Start: 6726973

End: 6727329

Strand: Reverse

Name: 113477768

Synonym: Tery_4364

Alternate gene names: NA

Gene position: 6727329-6726973 (Counterclockwise)

Preceding gene: 113477771

Following gene: 113477767

Centisome position: 86.8

GC content: 36.41

Gene sequence:

>357_bases
ATGAATGATGAAAGTTCGATTGGTTTAGCAGAGTTAATTCAACAAGTAAAAGAGGAATTGCTAACTCAAGCACCAGATGG
GGAAACAGATATTCCTATTTTTGCAGTTGATTCTGTGGAATTAGAGTTACAAGTTACAGTCAAAAAATCAGGAAAAGCTG
GAATTAAAATATATGTTCTAGAAATGGGAGGAGGTAGCAGTCGGGATGATGTCCAGAAGGTTAAGGTGAAATTATCTCCA
CTTTTGAATAGGGAACAGCTTTTAAAAATGTATCAAAAGAAGTATCCGGAAAATTGGCCAGAATTTTTGGAAAAAGTGAG
TGATGCTGGGATGAAAGGCCCGGAACCAAATTTCTAA

Upstream 100 bases:

>100_bases
TAAGAAGTAAATATTTATCAAATTCTTTGACATTTAATTTTGTGTTGAATTATAATATTTATTTTGGTTTAAAACAAAAA
AAAGGATAAGGTTAAAAAGT

Downstream 100 bases:

>100_bases
ATAATAATACCAATTTTATTAACTTAGGCTACACCACTTATCTCCATTTCTGAAATAATTTCGCGAAATTACTGAGGGGG
TAAAAGTTTTGATCTATTAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 118; Mature: 118

Protein sequence:

>118_residues
MNDESSIGLAELIQQVKEELLTQAPDGETDIPIFAVDSVELELQVTVKKSGKAGIKIYVLEMGGGSSRDDVQKVKVKLSP
LLNREQLLKMYQKKYPENWPEFLEKVSDAGMKGPEPNF

Sequences:

>Translated_118_residues
MNDESSIGLAELIQQVKEELLTQAPDGETDIPIFAVDSVELELQVTVKKSGKAGIKIYVLEMGGGSSRDDVQKVKVKLSP
LLNREQLLKMYQKKYPENWPEFLEKVSDAGMKGPEPNF
>Mature_118_residues
MNDESSIGLAELIQQVKEELLTQAPDGETDIPIFAVDSVELELQVTVKKSGKAGIKIYVLEMGGGSSRDDVQKVKVKLSP
LLNREQLLKMYQKKYPENWPEFLEKVSDAGMKGPEPNF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13166; Mature: 13166

Theoretical pI: Translated: 4.52; Mature: 4.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNDESSIGLAELIQQVKEELLTQAPDGETDIPIFAVDSVELELQVTVKKSGKAGIKIYVL
CCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCEEEECCEEEEEEEEEECCCCCCEEEEEE
EMGGGSSRDDVQKVKVKLSPLLNREQLLKMYQKKYPENWPEFLEKVSDAGMKGPEPNF
EECCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MNDESSIGLAELIQQVKEELLTQAPDGETDIPIFAVDSVELELQVTVKKSGKAGIKIYVL
CCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCEEEECCEEEEEEEEEECCCCCCEEEEEE
EMGGGSSRDDVQKVKVKLSPLLNREQLLKMYQKKYPENWPEFLEKVSDAGMKGPEPNF
EECCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA