| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is 113477768
Identifier: 113477768
GI number: 113477768
Start: 6726973
End: 6727329
Strand: Reverse
Name: 113477768
Synonym: Tery_4364
Alternate gene names: NA
Gene position: 6727329-6726973 (Counterclockwise)
Preceding gene: 113477771
Following gene: 113477767
Centisome position: 86.8
GC content: 36.41
Gene sequence:
>357_bases ATGAATGATGAAAGTTCGATTGGTTTAGCAGAGTTAATTCAACAAGTAAAAGAGGAATTGCTAACTCAAGCACCAGATGG GGAAACAGATATTCCTATTTTTGCAGTTGATTCTGTGGAATTAGAGTTACAAGTTACAGTCAAAAAATCAGGAAAAGCTG GAATTAAAATATATGTTCTAGAAATGGGAGGAGGTAGCAGTCGGGATGATGTCCAGAAGGTTAAGGTGAAATTATCTCCA CTTTTGAATAGGGAACAGCTTTTAAAAATGTATCAAAAGAAGTATCCGGAAAATTGGCCAGAATTTTTGGAAAAAGTGAG TGATGCTGGGATGAAAGGCCCGGAACCAAATTTCTAA
Upstream 100 bases:
>100_bases TAAGAAGTAAATATTTATCAAATTCTTTGACATTTAATTTTGTGTTGAATTATAATATTTATTTTGGTTTAAAACAAAAA AAAGGATAAGGTTAAAAAGT
Downstream 100 bases:
>100_bases ATAATAATACCAATTTTATTAACTTAGGCTACACCACTTATCTCCATTTCTGAAATAATTTCGCGAAATTACTGAGGGGG TAAAAGTTTTGATCTATTAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 118; Mature: 118
Protein sequence:
>118_residues MNDESSIGLAELIQQVKEELLTQAPDGETDIPIFAVDSVELELQVTVKKSGKAGIKIYVLEMGGGSSRDDVQKVKVKLSP LLNREQLLKMYQKKYPENWPEFLEKVSDAGMKGPEPNF
Sequences:
>Translated_118_residues MNDESSIGLAELIQQVKEELLTQAPDGETDIPIFAVDSVELELQVTVKKSGKAGIKIYVLEMGGGSSRDDVQKVKVKLSP LLNREQLLKMYQKKYPENWPEFLEKVSDAGMKGPEPNF >Mature_118_residues MNDESSIGLAELIQQVKEELLTQAPDGETDIPIFAVDSVELELQVTVKKSGKAGIKIYVLEMGGGSSRDDVQKVKVKLSP LLNREQLLKMYQKKYPENWPEFLEKVSDAGMKGPEPNF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13166; Mature: 13166
Theoretical pI: Translated: 4.52; Mature: 4.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNDESSIGLAELIQQVKEELLTQAPDGETDIPIFAVDSVELELQVTVKKSGKAGIKIYVL CCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCEEEECCEEEEEEEEEECCCCCCEEEEEE EMGGGSSRDDVQKVKVKLSPLLNREQLLKMYQKKYPENWPEFLEKVSDAGMKGPEPNF EECCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure MNDESSIGLAELIQQVKEELLTQAPDGETDIPIFAVDSVELELQVTVKKSGKAGIKIYVL CCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCEEEECCEEEEEEEEEECCCCCCEEEEEE EMGGGSSRDDVQKVKVKLSPLLNREQLLKMYQKKYPENWPEFLEKVSDAGMKGPEPNF EECCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA