Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113477771

Identifier: 113477771

GI number: 113477771

Start: 6731613

End: 6732389

Strand: Reverse

Name: 113477771

Synonym: Tery_4367

Alternate gene names: NA

Gene position: 6732389-6731613 (Counterclockwise)

Preceding gene: 113477776

Following gene: 113477768

Centisome position: 86.87

GC content: 38.22

Gene sequence:

>777_bases
ATGAAGGATAAAGCTCAAGTGTCAAAAAAAAATACTCTAACTAAGACAGTACAAACGACAGTTGCTGCATTAGCTAGTAC
AGTTCTGTTAGGAGTAGGTAACGCTCAAGCAAATACAAAAAATATATTTATCGACGAGTTTCTCGATTTTCAGATGGTTG
AGAGTACTGGTCCACTAACTAACAGCCAAGTAGGACCAACAGGTAATATTCTGGGTGGTTACCGGGATATATTTGTTGAG
GTAGTAAACAACAATAGTAATAATCCATATCTCAGCAGTAATCTCTCAGTAGTTAACGGAGAAGGATCTTTTAACAACGA
TGCTGGCATCACTGGGACTGGAATGATACGTTGGGATGGAGTTAATAATTCTCAAACACTAAATCCTCAGGGTTTGGGAG
GAATAAATATAACTCAGGGTAATCTAGATAGTATTTCGATGGATATCATGTTAGCCGAGGCTGCTGGTTTAGATATGACC
TTTACTATCTATGATATGAACAGCAACAGTTCAAGTATTTCACGGATCCTTAACAGCAGTACGTTGACTTCAAAAGCAGA
AACTTTCCTCTTTCAAGATTTTGTTGGTACTGCAGATTTCACTAATGTTGGGGCAATTCAACTAGACATTAGTAGTCCAG
AGTCAATGGATGCTATTGTTGGTCCAGTCAGGATTAGTAAGTCTACTCCGGTACCTGAGCCAACTTCAATTTTAGGTTTA
TTGGCTATAGGCGCTGTTGGTACTGGTTCGATGTTAAAACAGAAAAAGAATAACTAA

Upstream 100 bases:

>100_bases
GGACTTATGCAGGCTAGCTTAGTAAAATAACCATTTATCCTAGAAATCGGCTTTCTTTGCCTCAGTCCGGGGAAATACAA
CTCTAAGGATCATAATAATT

Downstream 100 bases:

>100_bases
AGTTATATGGTCATTTCAAATAAGAGTATAACACTTTTTGTTCTGAAGCTATTTCACAAAAAATCAAGCCTCGTCTTGAC
TTCAATTGAAATGACTATAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 258; Mature: 258

Protein sequence:

>258_residues
MKDKAQVSKKNTLTKTVQTTVAALASTVLLGVGNAQANTKNIFIDEFLDFQMVESTGPLTNSQVGPTGNILGGYRDIFVE
VVNNNSNNPYLSSNLSVVNGEGSFNNDAGITGTGMIRWDGVNNSQTLNPQGLGGINITQGNLDSISMDIMLAEAAGLDMT
FTIYDMNSNSSSISRILNSSTLTSKAETFLFQDFVGTADFTNVGAIQLDISSPESMDAIVGPVRISKSTPVPEPTSILGL
LAIGAVGTGSMLKQKKNN

Sequences:

>Translated_258_residues
MKDKAQVSKKNTLTKTVQTTVAALASTVLLGVGNAQANTKNIFIDEFLDFQMVESTGPLTNSQVGPTGNILGGYRDIFVE
VVNNNSNNPYLSSNLSVVNGEGSFNNDAGITGTGMIRWDGVNNSQTLNPQGLGGINITQGNLDSISMDIMLAEAAGLDMT
FTIYDMNSNSSSISRILNSSTLTSKAETFLFQDFVGTADFTNVGAIQLDISSPESMDAIVGPVRISKSTPVPEPTSILGL
LAIGAVGTGSMLKQKKNN
>Mature_258_residues
MKDKAQVSKKNTLTKTVQTTVAALASTVLLGVGNAQANTKNIFIDEFLDFQMVESTGPLTNSQVGPTGNILGGYRDIFVE
VVNNNSNNPYLSSNLSVVNGEGSFNNDAGITGTGMIRWDGVNNSQTLNPQGLGGINITQGNLDSISMDIMLAEAAGLDMT
FTIYDMNSNSSSISRILNSSTLTSKAETFLFQDFVGTADFTNVGAIQLDISSPESMDAIVGPVRISKSTPVPEPTSILGL
LAIGAVGTGSMLKQKKNN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27140; Mature: 27140

Theoretical pI: Translated: 4.32; Mature: 4.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKDKAQVSKKNTLTKTVQTTVAALASTVLLGVGNAQANTKNIFIDEFLDFQMVESTGPLT
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCEEEHHHHCCEEEECCCCCCC
NSQVGPTGNILGGYRDIFVEVVNNNSNNPYLSSNLSVVNGEGSFNNDAGITGTGMIRWDG
CCCCCCCCCCCCCHHHEEEEEEECCCCCCEEECCCEEEECCCCCCCCCCCEECEEEEECC
VNNSQTLNPQGLGGINITQGNLDSISMDIMLAEAAGLDMTFTIYDMNSNSSSISRILNSS
CCCCCCCCCCCCCCEEEECCCCCCEEEEEEEEECCCCEEEEEEEEECCCHHHHHHHHCCH
TLTSKAETFLFQDFVGTADFTNVGAIQLDISSPESMDAIVGPVRISKSTPVPEPTSILGL
HCHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCHHHCCCEEECCCCCCCCHHHHHHH
LAIGAVGTGSMLKQKKNN
HHHCCCCCCHHHHHCCCC
>Mature Secondary Structure
MKDKAQVSKKNTLTKTVQTTVAALASTVLLGVGNAQANTKNIFIDEFLDFQMVESTGPLT
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCEEEHHHHCCEEEECCCCCCC
NSQVGPTGNILGGYRDIFVEVVNNNSNNPYLSSNLSVVNGEGSFNNDAGITGTGMIRWDG
CCCCCCCCCCCCCHHHEEEEEEECCCCCCEEECCCEEEECCCCCCCCCCCEECEEEEECC
VNNSQTLNPQGLGGINITQGNLDSISMDIMLAEAAGLDMTFTIYDMNSNSSSISRILNSS
CCCCCCCCCCCCCCEEEECCCCCCEEEEEEEEECCCCEEEEEEEEECCCHHHHHHHHCCH
TLTSKAETFLFQDFVGTADFTNVGAIQLDISSPESMDAIVGPVRISKSTPVPEPTSILGL
HCHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCHHHCCCEEECCCCCCCCHHHHHHH
LAIGAVGTGSMLKQKKNN
HHHCCCCCCHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA