Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113476821

Identifier: 113476821

GI number: 113476821

Start: 5066444

End: 5066794

Strand: Reverse

Name: 113476821

Synonym: Tery_3303

Alternate gene names: NA

Gene position: 5066794-5066444 (Counterclockwise)

Preceding gene: 113476825

Following gene: 113476820

Centisome position: 65.38

GC content: 42.17

Gene sequence:

>351_bases
ATGAAATTAAAAAGATTAGGCCATATAGCTATCTGTGTCCAGGACGTTGACCAATCAGTAGAGTTCTATAAAAATCTAGG
CATGGAAATAACCTGGAAAGATTCTGACTGGGCATATCTCAAAGCAGGAGATGATGGACTGGCGCTTTTGAGTCCTACAT
ATGAGCAAGCAGGGCCACATTTTGGGTTTGTGTTTAGCGATCGCTCAGAAATGGAAATGGCATACAAGCAGCTCCAAGCC
AAGGAAGTTGAAGTATCTCCAATCCATGAACACCGAGATGGCACAGCTTCTTTCTATGGAAGAGATTTAGATGGTAACTG
GTTTGAATACCTCTATGAACCAGTGAACTAG

Upstream 100 bases:

>100_bases
ATGATTTATATACAGAGAATAAAATAAGATTACTACATACGACCTAGTGTATTTATACACAATACAATTAGGAATAGATA
AATTTTAATAACTCTTTACC

Downstream 100 bases:

>100_bases
GAACTTTAGTTGATAATTAAAATAAAATTTTACGCCTTAATACTATAGAGGACTTGAAGAATTAACTCTGCTTGAAAGGG
GTTTTACTTCAATTCTATTT

Product: glyoxalase/bleomycin resistance protein/dioxygenase

Products: NA

Alternate protein names: Glyoxalase Family Protein; Lactoylglutathione Lyase; Lactoylglutathione Lyase/Catechol 2 3-Dioxygenase ; Glyoxalase/Bleomycin Resistance Protein/Dioxygenase

Number of amino acids: Translated: 116; Mature: 116

Protein sequence:

>116_residues
MKLKRLGHIAICVQDVDQSVEFYKNLGMEITWKDSDWAYLKAGDDGLALLSPTYEQAGPHFGFVFSDRSEMEMAYKQLQA
KEVEVSPIHEHRDGTASFYGRDLDGNWFEYLYEPVN

Sequences:

>Translated_116_residues
MKLKRLGHIAICVQDVDQSVEFYKNLGMEITWKDSDWAYLKAGDDGLALLSPTYEQAGPHFGFVFSDRSEMEMAYKQLQA
KEVEVSPIHEHRDGTASFYGRDLDGNWFEYLYEPVN
>Mature_116_residues
MKLKRLGHIAICVQDVDQSVEFYKNLGMEITWKDSDWAYLKAGDDGLALLSPTYEQAGPHFGFVFSDRSEMEMAYKQLQA
KEVEVSPIHEHRDGTASFYGRDLDGNWFEYLYEPVN

Specific function: Unknown

COG id: COG0346

COG function: function code E; Lactoylglutathione lyase and related lyases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13387; Mature: 13387

Theoretical pI: Translated: 4.49; Mature: 4.49

Prosite motif: PS00934 GLYOXALASE_I_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLKRLGHIAICVQDVDQSVEFYKNLGMEITWKDSDWAYLKAGDDGLALLSPTYEQAGPH
CCCCCCCEEEEEEEHHHHHHHHHHHCCCEEEEECCCEEEEEECCCCEEEECCCHHHCCCE
FGFVFSDRSEMEMAYKQLQAKEVEVSPIHEHRDGTASFYGRDLDGNWFEYLYEPVN
EEEEECCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCEECCCCCCCCHHHHEECCCC
>Mature Secondary Structure
MKLKRLGHIAICVQDVDQSVEFYKNLGMEITWKDSDWAYLKAGDDGLALLSPTYEQAGPH
CCCCCCCEEEEEEEHHHHHHHHHHHCCCEEEEECCCEEEEEECCCCEEEECCCHHHCCCE
FGFVFSDRSEMEMAYKQLQAKEVEVSPIHEHRDGTASFYGRDLDGNWFEYLYEPVN
EEEEECCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCEECCCCCCCCHHHHEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA