Click here to switch to the map view.

The map label for this gene is 113476825

Identifier: 113476825

GI number: 113476825

Start: 5073506

End: 5075638

Strand: Reverse

Name: 113476825

Synonym: Tery_3307

Alternate gene names: NA

Gene position: 5075638-5073506 (Counterclockwise)

Preceding gene: 113476830

Following gene: 113476821

Centisome position: 65.49

GC content: 33.71

Gene sequence:

>2133_bases
ATGAGCACCAAAATTAATTCACTAAAGGAAAATTTCAGTTTTGAATTATTAGATTATGAGATAGAACATCAAGGGCAAGC
AGTTATCGATATTGCTGTTGATATGGATTATAAAGAAGGTATTGGCCAAGAAAATCCCTTTGAATATCCTGATTTTATCC
CTATTGCTGAGTTTATTGATAATTTTCTGGTTACTTATCCCAATGAAACTGATTTCTGGGAAATTCTCAATAAAAATCTG
ATCAGGACTTTGTTAACCCAGCCAATTCCCACTCCTTACGGTGTAGAATATAATCTTGATGAAATCTTAGATTCTTTAAC
AGTCGATATTCAAGTACAATCAGGTTCATCTGATTTTTCTATTCCCCGTGCTAGTCAAGTAGTAGGTATACCTGAAACAG
AGGTAGAAGTTAATTTAGGGGAAAATTTCAGTTTTGAATTATTAGATTACGAGATAGAACATCAAGGGCAAGCAGTTATC
GACATTGCTGTTGATATGGATTATAAAGAAGGTATTGGCCAAGAAAATCCCTTTGAATATCCTGATTTTGTCCCTATTGC
TGAGTTTATTGATAATTTTCTGGTCACCTATCCTAATGAAACTGATTTCTGGGAAATTCTCAATAAAAATCTGATCAGGA
CTTTGTTAACCCAGCCAATTCCCACTCCTTACGGTGTAGAATATAATCTTGATGAAATCTTAGATTCTTTAACAGTCGAT
ATTCAAGTACAATCAGGTTCATCTGATTTTTCTATTCCCCGTGCTAGTCAAGTAGTAGGTATACCTGAAACAGAGGTAGA
AGTTAATTTAGGGGAAAATTTCAGTTTTGAATTATTAGATTATGAGATAGAACATCAAGGGCAAGCAGTTATCGACATTG
CTGTTGATATGGATTATAAAGAAGGTATTGGCCAAGAAAATCCCTTTGAATATCCTGATTTTGTCCCTATTGCTGAGTTT
ATTGATAATTTTCTGGTCACCTATCCTAATGAAACTGATTTCTGGGAAATTCTCAATAAAAATCTGATCAGGACTTTGTT
AACCCAGCCAATTCCCACTCCTTACGGTGTAGAATATAATCTTGATGAAATCTTAGATTCTTTAACAGTCGATATTCAAG
TACAATCAGGTTCATCTGATTTTTCTATTCCCCGTGCTAGTCAAGTAGTAGGTATACCTGAAACAGAGGTAGAAGTTAAT
TTAGGGGAAAATTTCAGTTTTGAATTATTAGATTATGAGATAGAACATCAAGGGCAAGCAGTTATCGACATTGCTGTTGA
TATGGATTATAAAGAAGGTATTGGCCAAGAAAATCCCTTTGAATATCCTGATTTTATCCCTATTGCTCAGTTTATTGATA
ATTTTCTGGTCACCTATCCTAATGAAACTGATTTCTGGGAAATTCTCAATAAAAATCTGATCAGGACTTTGTTAACCCAG
CCAATTCCCACTCCTTACGGTGTAGAATATAATCTTGATGAAATCTTAGATTCTTTAACAGTCGATATTCAAGTACAATC
AGGTTCATCTGATTTTTCTATTCCCCGTGCTAGTCAAGTAGTTCAAACTGTAGATCAGATTGAAGATACTGAATTACTTC
AAGTTGTTTTCGGTACTGCTGGTGATGATATATTCGATAGTGCGTTTCCTGAAGATACTCAATTTGAAGGAGCAAAACAA
ATATTATTTACTGGTAATGGTAATGATAAGGTTGACGTTTCTCAAATAGGAATAAATAATTGGATTGATACTGGTAGTGG
TAATGATATAGTTTTTACGGGTACTAGTAATCGTATTATTTTAGGTAATGATAATGATATTATCTTTGCGGGTACTGGGC
AAGGTGGAAATTATATCAGTTTAGGGGAAGGAAAGGATCAACTTTGGGTTAGTACTAATAATAATGATTTACCTGAAAAT
CTTAACCAAATTAATGATTTTAATCCAGAAGATGATGTCATTGGCTTTGCTAATACTATTTTGAGTTTAGACAATAAAGG
AGAGCTTTGGGACTACCAACAATTAGGAAATGATATAATTATTTCCGCTTTTGGACAGGAAATTGCTCAGTTATTCAATA
CCACTATTACTGAAAGCAATTTTGTCTTTTTTGGGCATCAGCAAAACTTATAG

Upstream 100 bases:

>100_bases
TTCTGGAGTTCAGCCGAAACATCTGATTTAATATCAGAATTCAGCTATTAGCTGTCAGCTCCCAGAAATCTATTAATTGA
AGAAACCTAATCTCAAAAAA

Downstream 100 bases:

>100_bases
TTTTAGTTAAGATAATAATCATTTGACATTCTCCCCGGTCTAAAAGCCCAAGAATAGTCATATGGGTACCCAGTCCTAAG
CCCTCCTGGGAGGGGAATGG

Product: hypothetical protein

Products: NA

Alternate protein names: Glycerophosphoryl Diester Phosphodiesterase; Type I Phosphodiesterase/Nucleotide Pyrophosphatase; Phytase; Type 3 Multicopper Oxidase

Number of amino acids: Translated: 710; Mature: 709

Protein sequence:

>710_residues
MSTKINSLKENFSFELLDYEIEHQGQAVIDIAVDMDYKEGIGQENPFEYPDFIPIAEFIDNFLVTYPNETDFWEILNKNL
IRTLLTQPIPTPYGVEYNLDEILDSLTVDIQVQSGSSDFSIPRASQVVGIPETEVEVNLGENFSFELLDYEIEHQGQAVI
DIAVDMDYKEGIGQENPFEYPDFVPIAEFIDNFLVTYPNETDFWEILNKNLIRTLLTQPIPTPYGVEYNLDEILDSLTVD
IQVQSGSSDFSIPRASQVVGIPETEVEVNLGENFSFELLDYEIEHQGQAVIDIAVDMDYKEGIGQENPFEYPDFVPIAEF
IDNFLVTYPNETDFWEILNKNLIRTLLTQPIPTPYGVEYNLDEILDSLTVDIQVQSGSSDFSIPRASQVVGIPETEVEVN
LGENFSFELLDYEIEHQGQAVIDIAVDMDYKEGIGQENPFEYPDFIPIAQFIDNFLVTYPNETDFWEILNKNLIRTLLTQ
PIPTPYGVEYNLDEILDSLTVDIQVQSGSSDFSIPRASQVVQTVDQIEDTELLQVVFGTAGDDIFDSAFPEDTQFEGAKQ
ILFTGNGNDKVDVSQIGINNWIDTGSGNDIVFTGTSNRIILGNDNDIIFAGTGQGGNYISLGEGKDQLWVSTNNNDLPEN
LNQINDFNPEDDVIGFANTILSLDNKGELWDYQQLGNDIIISAFGQEIAQLFNTTITESNFVFFGHQQNL

Sequences:

>Translated_710_residues
MSTKINSLKENFSFELLDYEIEHQGQAVIDIAVDMDYKEGIGQENPFEYPDFIPIAEFIDNFLVTYPNETDFWEILNKNL
IRTLLTQPIPTPYGVEYNLDEILDSLTVDIQVQSGSSDFSIPRASQVVGIPETEVEVNLGENFSFELLDYEIEHQGQAVI
DIAVDMDYKEGIGQENPFEYPDFVPIAEFIDNFLVTYPNETDFWEILNKNLIRTLLTQPIPTPYGVEYNLDEILDSLTVD
IQVQSGSSDFSIPRASQVVGIPETEVEVNLGENFSFELLDYEIEHQGQAVIDIAVDMDYKEGIGQENPFEYPDFVPIAEF
IDNFLVTYPNETDFWEILNKNLIRTLLTQPIPTPYGVEYNLDEILDSLTVDIQVQSGSSDFSIPRASQVVGIPETEVEVN
LGENFSFELLDYEIEHQGQAVIDIAVDMDYKEGIGQENPFEYPDFIPIAQFIDNFLVTYPNETDFWEILNKNLIRTLLTQ
PIPTPYGVEYNLDEILDSLTVDIQVQSGSSDFSIPRASQVVQTVDQIEDTELLQVVFGTAGDDIFDSAFPEDTQFEGAKQ
ILFTGNGNDKVDVSQIGINNWIDTGSGNDIVFTGTSNRIILGNDNDIIFAGTGQGGNYISLGEGKDQLWVSTNNNDLPEN
LNQINDFNPEDDVIGFANTILSLDNKGELWDYQQLGNDIIISAFGQEIAQLFNTTITESNFVFFGHQQNL
>Mature_709_residues
STKINSLKENFSFELLDYEIEHQGQAVIDIAVDMDYKEGIGQENPFEYPDFIPIAEFIDNFLVTYPNETDFWEILNKNLI
RTLLTQPIPTPYGVEYNLDEILDSLTVDIQVQSGSSDFSIPRASQVVGIPETEVEVNLGENFSFELLDYEIEHQGQAVID
IAVDMDYKEGIGQENPFEYPDFVPIAEFIDNFLVTYPNETDFWEILNKNLIRTLLTQPIPTPYGVEYNLDEILDSLTVDI
QVQSGSSDFSIPRASQVVGIPETEVEVNLGENFSFELLDYEIEHQGQAVIDIAVDMDYKEGIGQENPFEYPDFVPIAEFI
DNFLVTYPNETDFWEILNKNLIRTLLTQPIPTPYGVEYNLDEILDSLTVDIQVQSGSSDFSIPRASQVVGIPETEVEVNL
GENFSFELLDYEIEHQGQAVIDIAVDMDYKEGIGQENPFEYPDFIPIAQFIDNFLVTYPNETDFWEILNKNLIRTLLTQP
IPTPYGVEYNLDEILDSLTVDIQVQSGSSDFSIPRASQVVQTVDQIEDTELLQVVFGTAGDDIFDSAFPEDTQFEGAKQI
LFTGNGNDKVDVSQIGINNWIDTGSGNDIVFTGTSNRIILGNDNDIIFAGTGQGGNYISLGEGKDQLWVSTNNNDLPENL
NQINDFNPEDDVIGFANTILSLDNKGELWDYQQLGNDIIISAFGQEIAQLFNTTITESNFVFFGHQQNL

Specific function: Unknown

COG id: COG2931

COG function: function code Q; RTX toxins and related Ca2+-binding proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 80007; Mature: 79876

Theoretical pI: Translated: 3.45; Mature: 3.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
0.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
0.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTKINSLKENFSFELLDYEIEHQGQAVIDIAVDMDYKEGIGQENPFEYPDFIPIAEFID
CCCCHHHHHHCCCEEEEEEEECCCCCEEEEEEEECCHHHCCCCCCCCCCCCCCHHHHHHC
NFLVTYPNETDFWEILNKNLIRTLLTQPIPTPYGVEYNLDEILDSLTVDIQVQSGSSDFS
CCEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHCCEEEEEEEECCCCCCC
IPRASQVVGIPETEVEVNLGENFSFELLDYEIEHQGQAVIDIAVDMDYKEGIGQENPFEY
CCCCCEEECCCCCEEEEECCCCCEEEEEEEEECCCCCEEEEEEEECCHHHCCCCCCCCCC
PDFVPIAEFIDNFLVTYPNETDFWEILNKNLIRTLLTQPIPTPYGVEYNLDEILDSLTVD
CCCCHHHHHHCCCEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHCCEEEE
IQVQSGSSDFSIPRASQVVGIPETEVEVNLGENFSFELLDYEIEHQGQAVIDIAVDMDYK
EEEECCCCCCCCCCCCEEECCCCCEEEEECCCCCEEEEEEEEECCCCCEEEEEEEECCHH
EGIGQENPFEYPDFVPIAEFIDNFLVTYPNETDFWEILNKNLIRTLLTQPIPTPYGVEYN
HCCCCCCCCCCCCCCHHHHHHCCCEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCC
LDEILDSLTVDIQVQSGSSDFSIPRASQVVGIPETEVEVNLGENFSFELLDYEIEHQGQA
HHHHHCCEEEEEEEECCCCCCCCCCCCEEECCCCCEEEEECCCCCEEEEEEEEECCCCCE
VIDIAVDMDYKEGIGQENPFEYPDFIPIAQFIDNFLVTYPNETDFWEILNKNLIRTLLTQ
EEEEEEECCHHHCCCCCCCCCCCCCCHHHHHHHHHEEECCCCCHHHHHHHHHHHHHHHHC
PIPTPYGVEYNLDEILDSLTVDIQVQSGSSDFSIPRASQVVQTVDQIEDTELLQVVFGTA
CCCCCCCCCCCHHHHHCCEEEEEEEECCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHCCC
GDDIFDSAFPEDTQFEGAKQILFTGNGNDKVDVSQIGINNWIDTGSGNDIVFTGTSNRII
CCHHHHCCCCCCCCCCCCEEEEEECCCCCEEEEEEECCCCCCCCCCCCEEEEECCCCEEE
LGNDNDIIFAGTGQGGNYISLGEGKDQLWVSTNNNDLPENLNQINDFNPEDDVIGFANTI
EECCCCEEEEECCCCCCEEEECCCCCEEEEECCCCCCHHHHHHHCCCCCCCCHHHHHHHH
LSLDNKGELWDYQQLGNDIIISAFGQEIAQLFNTTITESNFVFFGHQQNL
EECCCCCCCCCHHHCCCEEEEEHHHHHHHHHHHHHCCCCCEEEEECCCCC
>Mature Secondary Structure 
STKINSLKENFSFELLDYEIEHQGQAVIDIAVDMDYKEGIGQENPFEYPDFIPIAEFID
CCCHHHHHHCCCEEEEEEEECCCCCEEEEEEEECCHHHCCCCCCCCCCCCCCHHHHHHC
NFLVTYPNETDFWEILNKNLIRTLLTQPIPTPYGVEYNLDEILDSLTVDIQVQSGSSDFS
CCEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHCCEEEEEEEECCCCCCC
IPRASQVVGIPETEVEVNLGENFSFELLDYEIEHQGQAVIDIAVDMDYKEGIGQENPFEY
CCCCCEEECCCCCEEEEECCCCCEEEEEEEEECCCCCEEEEEEEECCHHHCCCCCCCCCC
PDFVPIAEFIDNFLVTYPNETDFWEILNKNLIRTLLTQPIPTPYGVEYNLDEILDSLTVD
CCCCHHHHHHCCCEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHCCEEEE
IQVQSGSSDFSIPRASQVVGIPETEVEVNLGENFSFELLDYEIEHQGQAVIDIAVDMDYK
EEEECCCCCCCCCCCCEEECCCCCEEEEECCCCCEEEEEEEEECCCCCEEEEEEEECCHH
EGIGQENPFEYPDFVPIAEFIDNFLVTYPNETDFWEILNKNLIRTLLTQPIPTPYGVEYN
HCCCCCCCCCCCCCCHHHHHHCCCEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCC
LDEILDSLTVDIQVQSGSSDFSIPRASQVVGIPETEVEVNLGENFSFELLDYEIEHQGQA
HHHHHCCEEEEEEEECCCCCCCCCCCCEEECCCCCEEEEECCCCCEEEEEEEEECCCCCE
VIDIAVDMDYKEGIGQENPFEYPDFIPIAQFIDNFLVTYPNETDFWEILNKNLIRTLLTQ
EEEEEEECCHHHCCCCCCCCCCCCCCHHHHHHHHHEEECCCCCHHHHHHHHHHHHHHHHC
PIPTPYGVEYNLDEILDSLTVDIQVQSGSSDFSIPRASQVVQTVDQIEDTELLQVVFGTA
CCCCCCCCCCCHHHHHCCEEEEEEEECCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHCCC
GDDIFDSAFPEDTQFEGAKQILFTGNGNDKVDVSQIGINNWIDTGSGNDIVFTGTSNRII
CCHHHHCCCCCCCCCCCCEEEEEECCCCCEEEEEEECCCCCCCCCCCCEEEEECCCCEEE
LGNDNDIIFAGTGQGGNYISLGEGKDQLWVSTNNNDLPENLNQINDFNPEDDVIGFANTI
EECCCCEEEEECCCCCCEEEECCCCCEEEEECCCCCCHHHHHHHCCCCCCCCHHHHHHHH
LSLDNKGELWDYQQLGNDIIISAFGQEIAQLFNTTITESNFVFFGHQQNL
EECCCCCCCCCHHHCCCEEEEEHHHHHHHHHHHHHCCCCCEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA