Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113476690

Identifier: 113476690

GI number: 113476690

Start: 4804738

End: 4806717

Strand: Reverse

Name: 113476690

Synonym: Tery_3148

Alternate gene names: NA

Gene position: 4806717-4804738 (Counterclockwise)

Preceding gene: 113476691

Following gene: 113476689

Centisome position: 62.02

GC content: 35.76

Gene sequence:

>1980_bases
ATGAGCAATCCATTTTCTAATATTTATTCCACTCAAATAGAGCCTAAAAAGGGCGATATTAAACTTCAGAAAAGTCTGCT
TAAGCTAGGTTGTGAAGGTGATTTTGATGCTATTAAAACCATGTTTCAACAATTTATTCCTGAAGATGAGGAGATTTATG
ATGCGAGATATTTAGGTATTCAAGGTTTTTTTTGTTTGGGAAATCGTCAATTTGCTTGTGTGACTGAGCGTCGGATAGCA
CATATTAGTGTAGGTTATTTTGGGGAACTGAATTATGAAGATGGTTATTTAGAGCACATAAATAGTGGTTTTGTTTACAA
ACCGAGTAAATTAGCTTTGTATATTCATATAGGAGCTGTAATAGCAGCAATAACTTACACTCTTAGTTCGATTGCAGGGA
TAATTTTTGCTCTGGTTTTGGCATTAATCATCCTGCCATTTTCCGGAAAAATATACTATCTAATTTTTAAGTGCGGGCTT
GTATTACCCATTAGAGAAGGAAATTTTGTTCTCGCTCCTTATGGAGACAATGTGTATTGGTACACAAATCGCTTGCTTTA
CATTTTTACCGATCATAAATTACTAACAAGGGCAAATGCTCTTTACCGTCAATTTATTATCAGCAGAGAAGAACGACTTA
ATACAGTTGAAAAATATCCTTTACCAGACTTGGTATCCAGAAGTGAAATCCCTGAATTAACTCCGTTACCCTTATCGTCA
TTACCATCAGTTGATGCTCCTGAAAACAGGCCTCTCCAGAAAAGGTTCTCAAGCCTTTATGCTACCGTTCGTAAATTGGT
GTTTTTGGAGAGGTCTAATATTAAACCTAAAATAATCACAGGTTTAATAGTTACAATGGGAATAGGAGGATTTTTTGCTG
TCACTAATATTCTGATTCCTCAGTTAAAAGAAAAAAAAGCTAAAATTTTACTTGAAGAAGCTAATAGCCTAGAAGAAATA
GGGAATTATGAAAGTGCGCTAGAAAAATACCTTGAAGTTTTTGAACTTCTACCTGAATCAGCGGATGCTCCGATACGAGC
TTGTTTGATACTCAATCTTGTAAAAAACTCTGAGCCAGAAACAACTATTTCTGTCTGTAAAGCAGCTATTAGTTTTAATC
GCTATAATCACTTTCTATGGAAAGAAAAGGGAGATGCTTTATGGAAATTGGATCAAAAAGAAGAAGCATTAGAATCCTAT
CAAAAAGTTGTAGAAATTCAATCAGATGATTCAGAAGTTTGGTACAAGATAGGTTTGATTTGGGAAAACAAAGGAGAGAT
AAATGAAGCTTTAAATGCTTTTAACAAAGCTATAAAGGGTAATGGAGAATTTGGAGAATTCAGTATAGCGGATGTTTGGC
AGAAAAAATGCTATCTTTTAGCTGAACAGGGAGAAGACACTCAAGAAACTTATTATGCCTGCAATCAAAGAGTCGAGCTG
GTTGATTATGATTATCGAGCTTGGAAGGAGCGAGGGAATGCTTTGTCGAAGTTAAAGGGTAAACGTCAAGCATTAAATTC
CTACTGGAGAGCTGTTCAATTTAAATCAGACGATTCAGAAGTCTGGTATAAAATAGGAGTGATTTACCAGGACAGAGGAT
GGCGAGATAAGGCTTTAGATGCTTTTGAGAAGGCGATAGAAGGTAATGGGGAATTTGGAGAATATAGTATAACCCATGTT
TGGGACAAAAAATGTTCTATTTACCTTGACTTAGAAAAATTTCCAGACGCTTTTGCAGCTTGCAAAAAAATAAATAAAAA
ACTGACAAATGCAACTGTTACAGGCACTTCTTGGGAGACCAAGAATGTTCGCTCTGGAAGCTCTACTGAGACAGAGGTTC
TTTTTGAATTAACTATTGGGAGTCCTGTTAGAGTCCTCGACGAGAGGTATAACTCAGATAATTATCTTTGGTACAAAATT
TATAGTCCACAGTATCAGAGACAGGGATGGATTGCAAGTCAGTTGATTAAACGCGACTAA

Upstream 100 bases:

>100_bases
ATCGCATTAAGTTAAGAGGTGTTGTTTAATAATAGACATCTTTAGTAAAGTAACTTTAAATTATTGTCAATCAAGTAAAA
ATAAACTGGTTGGGTAAAAA

Downstream 100 bases:

>100_bases
CGATCTAGAGATCGATATTTTTAAAGACCAGTAAAGAGTAAAATCAAATCAATTACCGCAAAATAACCAACTATGTTTGA
CCTAGAACTAACCTGGGATA

Product: hypothetical protein

Products: NA

Alternate protein names: Tetratricopeptide Repeat Domain Protein; Tetratricopeptide Repeat Family; O-Linked N-Acetylglucosamine Transferase; Tetratricopeptide Repeat Domain-Containing Protein; Tetratricopeptide TPR_2 Repeat Protein; O-Linked GlcNAc Transferase; TPR Domain-Containing Protein; Serine/Threonine Protein Kinase With TPR Repeats; Peptidase S1 And S6 Chymotrypsin/Hap; Serine/Threonine Kinase; Protein Prenyltransferase Subunit Alpha; Tetratricopeptide Domain-Containing Protein; Serine/Threonine Protein Kinase; TPR Repeat-Containing Serine/Threonin Protein Kinase; Protein Kinase

Number of amino acids: Translated: 659; Mature: 658

Protein sequence:

>659_residues
MSNPFSNIYSTQIEPKKGDIKLQKSLLKLGCEGDFDAIKTMFQQFIPEDEEIYDARYLGIQGFFCLGNRQFACVTERRIA
HISVGYFGELNYEDGYLEHINSGFVYKPSKLALYIHIGAVIAAITYTLSSIAGIIFALVLALIILPFSGKIYYLIFKCGL
VLPIREGNFVLAPYGDNVYWYTNRLLYIFTDHKLLTRANALYRQFIISREERLNTVEKYPLPDLVSRSEIPELTPLPLSS
LPSVDAPENRPLQKRFSSLYATVRKLVFLERSNIKPKIITGLIVTMGIGGFFAVTNILIPQLKEKKAKILLEEANSLEEI
GNYESALEKYLEVFELLPESADAPIRACLILNLVKNSEPETTISVCKAAISFNRYNHFLWKEKGDALWKLDQKEEALESY
QKVVEIQSDDSEVWYKIGLIWENKGEINEALNAFNKAIKGNGEFGEFSIADVWQKKCYLLAEQGEDTQETYYACNQRVEL
VDYDYRAWKERGNALSKLKGKRQALNSYWRAVQFKSDDSEVWYKIGVIYQDRGWRDKALDAFEKAIEGNGEFGEYSITHV
WDKKCSIYLDLEKFPDAFAACKKINKKLTNATVTGTSWETKNVRSGSSTETEVLFELTIGSPVRVLDERYNSDNYLWYKI
YSPQYQRQGWIASQLIKRD

Sequences:

>Translated_659_residues
MSNPFSNIYSTQIEPKKGDIKLQKSLLKLGCEGDFDAIKTMFQQFIPEDEEIYDARYLGIQGFFCLGNRQFACVTERRIA
HISVGYFGELNYEDGYLEHINSGFVYKPSKLALYIHIGAVIAAITYTLSSIAGIIFALVLALIILPFSGKIYYLIFKCGL
VLPIREGNFVLAPYGDNVYWYTNRLLYIFTDHKLLTRANALYRQFIISREERLNTVEKYPLPDLVSRSEIPELTPLPLSS
LPSVDAPENRPLQKRFSSLYATVRKLVFLERSNIKPKIITGLIVTMGIGGFFAVTNILIPQLKEKKAKILLEEANSLEEI
GNYESALEKYLEVFELLPESADAPIRACLILNLVKNSEPETTISVCKAAISFNRYNHFLWKEKGDALWKLDQKEEALESY
QKVVEIQSDDSEVWYKIGLIWENKGEINEALNAFNKAIKGNGEFGEFSIADVWQKKCYLLAEQGEDTQETYYACNQRVEL
VDYDYRAWKERGNALSKLKGKRQALNSYWRAVQFKSDDSEVWYKIGVIYQDRGWRDKALDAFEKAIEGNGEFGEYSITHV
WDKKCSIYLDLEKFPDAFAACKKINKKLTNATVTGTSWETKNVRSGSSTETEVLFELTIGSPVRVLDERYNSDNYLWYKI
YSPQYQRQGWIASQLIKRD
>Mature_658_residues
SNPFSNIYSTQIEPKKGDIKLQKSLLKLGCEGDFDAIKTMFQQFIPEDEEIYDARYLGIQGFFCLGNRQFACVTERRIAH
ISVGYFGELNYEDGYLEHINSGFVYKPSKLALYIHIGAVIAAITYTLSSIAGIIFALVLALIILPFSGKIYYLIFKCGLV
LPIREGNFVLAPYGDNVYWYTNRLLYIFTDHKLLTRANALYRQFIISREERLNTVEKYPLPDLVSRSEIPELTPLPLSSL
PSVDAPENRPLQKRFSSLYATVRKLVFLERSNIKPKIITGLIVTMGIGGFFAVTNILIPQLKEKKAKILLEEANSLEEIG
NYESALEKYLEVFELLPESADAPIRACLILNLVKNSEPETTISVCKAAISFNRYNHFLWKEKGDALWKLDQKEEALESYQ
KVVEIQSDDSEVWYKIGLIWENKGEINEALNAFNKAIKGNGEFGEFSIADVWQKKCYLLAEQGEDTQETYYACNQRVELV
DYDYRAWKERGNALSKLKGKRQALNSYWRAVQFKSDDSEVWYKIGVIYQDRGWRDKALDAFEKAIEGNGEFGEYSITHVW
DKKCSIYLDLEKFPDAFAACKKINKKLTNATVTGTSWETKNVRSGSSTETEVLFELTIGSPVRVLDERYNSDNYLWYKIY
SPQYQRQGWIASQLIKRD

Specific function: Unknown

COG id: COG0457

COG function: function code R; FOG: TPR repeat

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Drosophila melanogaster, GI24656717, Length=202, Percent_Identity=26.7326732673267, Blast_Score=66, Evalue=8e-11,
Organism=Drosophila melanogaster, GI18110006, Length=202, Percent_Identity=26.7326732673267, Blast_Score=66, Evalue=8e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 75661; Mature: 75530

Theoretical pI: Translated: 6.10; Mature: 6.10

Prosite motif: PS50005 TPR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
0.3 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNPFSNIYSTQIEPKKGDIKLQKSLLKLGCEGDFDAIKTMFQQFIPEDEEIYDARYLGI
CCCCCCCHHHCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCHHHHHEEECC
QGFFCLGNRQFACVTERRIAHISVGYFGELNYEDGYLEHINSGFVYKPSKLALYIHIGAV
EEEEEECCCEEEEEECCCEEEEEEEEEEEECCCCCHHHHCCCCCEECCCCEEEEEEHHHH
IAAITYTLSSIAGIIFALVLALIILPFSGKIYYLIFKCGLVLPIREGNFVLAPYGDNVYW
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCEEEEEECCCEEEEECCCCEEE
YTNRLLYIFTDHKLLTRANALYRQFIISREERLNTVEKYPLPDLVSRSEIPELTPLPLSS
EECEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCCCCC
LPSVDAPENRPLQKRFSSLYATVRKLVFLERSNIKPKIITGLIVTMGIGGFFAVTNILIP
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHHHH
QLKEKKAKILLEEANSLEEIGNYESALEKYLEVFELLPESADAPIRACLILNLVKNSEPE
HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCH
TTISVCKAAISFNRYNHFLWKEKGDALWKLDQKEEALESYQKVVEIQSDDSEVWYKIGLI
HHHHHHHHHHHHHHHHHEEEECCCCCEEECCCHHHHHHHHHHHHEECCCCCEEEEEEEEE
WENKGEINEALNAFNKAIKGNGEFGEFSIADVWQKKCYLLAEQGEDTQETYYACNQRVEL
ECCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHEEEECCCCCHHHHHHHHCCCEEE
VDYDYRAWKERGNALSKLKGKRQALNSYWRAVQFKSDDSEVWYKIGVIYQDRGWRDKALD
EECHHHHHHHHCCHHHHHHHHHHHHHHHHHEEEECCCCCCEEEEEEEEEECCCCCHHHHH
AFEKAIEGNGEFGEYSITHVWDKKCSIYLDLEKFPDAFAACKKINKKLTNATVTGTSWET
HHHHHHCCCCCCCCEEEEEEECCCEEEEEEHHHCCHHHHHHHHHHHHHCCCEEECCCCCC
KNVRSGSSTETEVLFELTIGSPVRVLDERYNSDNYLWYKIYSPQYQRQGWIASQLIKRD
CCCCCCCCCCEEEEEEEECCCHHHHHHHHCCCCCEEEEEEECCCHHHCCHHHHHHHHCC
>Mature Secondary Structure 
SNPFSNIYSTQIEPKKGDIKLQKSLLKLGCEGDFDAIKTMFQQFIPEDEEIYDARYLGI
CCCCCCHHHCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCHHHHHEEECC
QGFFCLGNRQFACVTERRIAHISVGYFGELNYEDGYLEHINSGFVYKPSKLALYIHIGAV
EEEEEECCCEEEEEECCCEEEEEEEEEEEECCCCCHHHHCCCCCEECCCCEEEEEEHHHH
IAAITYTLSSIAGIIFALVLALIILPFSGKIYYLIFKCGLVLPIREGNFVLAPYGDNVYW
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCEEEEEECCCEEEEECCCCEEE
YTNRLLYIFTDHKLLTRANALYRQFIISREERLNTVEKYPLPDLVSRSEIPELTPLPLSS
EECEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCCCCC
LPSVDAPENRPLQKRFSSLYATVRKLVFLERSNIKPKIITGLIVTMGIGGFFAVTNILIP
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHHHH
QLKEKKAKILLEEANSLEEIGNYESALEKYLEVFELLPESADAPIRACLILNLVKNSEPE
HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCH
TTISVCKAAISFNRYNHFLWKEKGDALWKLDQKEEALESYQKVVEIQSDDSEVWYKIGLI
HHHHHHHHHHHHHHHHHEEEECCCCCEEECCCHHHHHHHHHHHHEECCCCCEEEEEEEEE
WENKGEINEALNAFNKAIKGNGEFGEFSIADVWQKKCYLLAEQGEDTQETYYACNQRVEL
ECCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHEEEECCCCCHHHHHHHHCCCEEE
VDYDYRAWKERGNALSKLKGKRQALNSYWRAVQFKSDDSEVWYKIGVIYQDRGWRDKALD
EECHHHHHHHHCCHHHHHHHHHHHHHHHHHEEEECCCCCCEEEEEEEEEECCCCCHHHHH
AFEKAIEGNGEFGEYSITHVWDKKCSIYLDLEKFPDAFAACKKINKKLTNATVTGTSWET
HHHHHHCCCCCCCCEEEEEEECCCEEEEEEHHHCCHHHHHHHHHHHHHCCCEEECCCCCC
KNVRSGSSTETEVLFELTIGSPVRVLDERYNSDNYLWYKIYSPQYQRQGWIASQLIKRD
CCCCCCCCCCEEEEEEEECCCHHHHHHHHCCCCCEEEEEEECCCHHHCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA