Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113476691

Identifier: 113476691

GI number: 113476691

Start: 4806789

End: 4807400

Strand: Reverse

Name: 113476691

Synonym: Tery_3149

Alternate gene names: NA

Gene position: 4807400-4806789 (Counterclockwise)

Preceding gene: 113476692

Following gene: 113476690

Centisome position: 62.03

GC content: 35.29

Gene sequence:

>612_bases
TTGACGATAACTCTTTCTAAAGGTAGTAAGTTTTTATTCACAAAATACTGTAATGGAGAAATAATTATGACAAAAAATCC
AGATAAAGGTTCAAAACAGGAGATTAGAATTTCTTCTAGTTTGCTTAAAAGAGCATCGAAAGACAATCAAGACGCAATTC
GTACCATGTTTCAACAGTTCATTCCAGAAGCAGAAGAAATTTGTTTGGTTCGGTATTTGGGATTGCAAGGACTATGGGGT
TTTGGAAATCGAGAGTTTGTGTGTCTAACAGATCGTCGTGTCGCCGATATTACCGTAGGCCGATTTGGTCAAGTTACTTA
TCAAGATGGTTATTTAGAACATATCAACAGCACTTTTATTTATCAACCTTCTAAGTTATGGTTGTACTTAATAGTTGCAG
TAGTAGGAATTACCGTAATAGGTTTGTTGTTATTACCTTTTGTCGTTCAAACATATTACAGATTCAACAAATGTGGAATA
GTTATAGCAGTTAGAGGGGGACTGCCTGTGTATATTTTTACAAATCGTGGTTTGTTAACACGGGCAAATGAACTTCTTCG
CGATCTTACGATCGCTAGAGAAAATCGCATTAAGTTAAGAGGTGTTGTTTAA

Upstream 100 bases:

>100_bases
AACCATCCAAAACCTACAGAATCAAGTCCCCAAAATCAAGAAATTCATCCTGATCGATGGGGAAGAGCCAAGGGATTTTG
GGGATGGTTTAGTTCTTTAT

Downstream 100 bases:

>100_bases
TAATAGACATCTTTAGTAAAGTAACTTTAAATTATTGTCAATCAAGTAAAAATAAACTGGTTGGGTAAAAAATGAGCAAT
CCATTTTCTAATATTTATTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 203; Mature: 202

Protein sequence:

>203_residues
MTITLSKGSKFLFTKYCNGEIIMTKNPDKGSKQEIRISSSLLKRASKDNQDAIRTMFQQFIPEAEEICLVRYLGLQGLWG
FGNREFVCLTDRRVADITVGRFGQVTYQDGYLEHINSTFIYQPSKLWLYLIVAVVGITVIGLLLLPFVVQTYYRFNKCGI
VIAVRGGLPVYIFTNRGLLTRANELLRDLTIARENRIKLRGVV

Sequences:

>Translated_203_residues
MTITLSKGSKFLFTKYCNGEIIMTKNPDKGSKQEIRISSSLLKRASKDNQDAIRTMFQQFIPEAEEICLVRYLGLQGLWG
FGNREFVCLTDRRVADITVGRFGQVTYQDGYLEHINSTFIYQPSKLWLYLIVAVVGITVIGLLLLPFVVQTYYRFNKCGI
VIAVRGGLPVYIFTNRGLLTRANELLRDLTIARENRIKLRGVV
>Mature_202_residues
TITLSKGSKFLFTKYCNGEIIMTKNPDKGSKQEIRISSSLLKRASKDNQDAIRTMFQQFIPEAEEICLVRYLGLQGLWGF
GNREFVCLTDRRVADITVGRFGQVTYQDGYLEHINSTFIYQPSKLWLYLIVAVVGITVIGLLLLPFVVQTYYRFNKCGIV
IAVRGGLPVYIFTNRGLLTRANELLRDLTIARENRIKLRGVV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23154; Mature: 23022

Theoretical pI: Translated: 10.07; Mature: 10.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTITLSKGSKFLFTKYCNGEIIMTKNPDKGSKQEIRISSSLLKRASKDNQDAIRTMFQQF
CEEEECCCCEEEEEEECCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
IPEAEEICLVRYLGLQGLWGFGNREFVCLTDRRVADITVGRFGQVTYQDGYLEHINSTFI
CCCHHHHHHHHHHCCCCCCCCCCCEEEEEECCEEEEEECCCCCEEEECCCHHHHCCCEEE
YQPSKLWLYLIVAVVGITVIGLLLLPFVVQTYYRFNKCGIVIAVRGGLPVYIFTNRGLLT
ECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCEEEEEECCCHHH
RANELLRDLTIARENRIKLRGVV
HHHHHHHHHHHHHCCCEEEEECC
>Mature Secondary Structure 
TITLSKGSKFLFTKYCNGEIIMTKNPDKGSKQEIRISSSLLKRASKDNQDAIRTMFQQF
EEEECCCCEEEEEEECCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
IPEAEEICLVRYLGLQGLWGFGNREFVCLTDRRVADITVGRFGQVTYQDGYLEHINSTFI
CCCHHHHHHHHHHCCCCCCCCCCCEEEEEECCEEEEEECCCCCEEEECCCHHHHCCCEEE
YQPSKLWLYLIVAVVGITVIGLLLLPFVVQTYYRFNKCGIVIAVRGGLPVYIFTNRGLLT
ECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCEEEEEECCCHHH
RANELLRDLTIARENRIKLRGVV
HHHHHHHHHHHHHCCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA