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The map label for this gene is yfbK [C]

Identifier: 113476689

GI number: 113476689

Start: 4803403

End: 4804665

Strand: Reverse

Name: yfbK [C]

Synonym: Tery_3147

Alternate gene names: 113476689

Gene position: 4804665-4803403 (Counterclockwise)

Preceding gene: 113476690

Following gene: 113476688

Centisome position: 61.99

GC content: 44.97

Gene sequence:

>1263_bases
ATGTTTGACCTAGAACTAACCTGGGATAGACCAGCAAAACTTAACTCCCAACAGGCAAATTACCGAGACGGCAGTCACGT
CCTACGAGTCCGCATTCAGCCTAAAACAGATGCCAATTTGCCCAGTTTACCAATACGGATGGCGATCGCTCTTGATACCA
GTCAATCAATGAAAGGGGAAAAACTGCAACGCGCTAAAGAAGCTTGTCTTGCCGTCGTTTCTCATTTACGGGACCCAGAC
TACTTATCTCTAGCAGGTTACTCTACCAGAGTCACACCTTTGCTGGAATCTCTAGCAGGTGGGGGTGCTGCTGCGGGATT
CGCCGAAGGGGCGATCGCTGATTTACAAGCAAGGGGTGTTACTCGCATCGACTTAGCATTAGATTGGATTGAAGAAAGTC
TCCTTCCAGAAAAAAGCCCACCACTCGTGGGGGTTTTAATTACCGATGGTCATGCTACAAATGCTGGAGGAACGCCTTTA
GATGATATGAAACCCTTTATTGTCAAAGCCAGGAACATGAAAAGTTGTGGCATTATCCTGTGTGCTGTAGGACTAGGTGA
TGCTGCTAACTTCAACACATCCTTTTTGACAGACTTAAGCGATCAAGGTGGAGGAGCATTTATCTATGCTGATACTCCAG
ACAAGCTATTGAGCGATCTACAAAACAGATTAAAAGCGGATCAGGAAATTGCCATTGTAGATGCCAAACTTCACTTAACA
CTATTAGCTTCCGGAGTTAAAGCGACAAGCTACTGTCGCTTCCGTCCAGAATATTTACCCCTAGAAGAAACCCGCCCCAA
TGAATTAAGCCTGGGAACACTCCGTAGGGATTACCCTACAGATATTTTAATTAGTTTGGATCTTCCCTCCATCAGTTTTG
GCGAACCCCTAGGAAGTCGCGACATAATTTCAGTAGAACTAACAGCTAGGGGATTAGAAACCCCCATAAAAAAAACAGCC
GCTATTACCTACACCACTGCCTACAGCGAAGCACAAAAAGTTAATACAGAAGTAAATCGTGATCGGCAATGTTGGGAAAT
CAACCTTTACAGCAAAGAGATGATAGACATTGGTAATAGTAATCCTAAGCGCACTGGAGAGTTGCTAACAGAAATTCAAG
TTACAGCAGCCAAAGCCGGGGAACTAGATCTTGCCAGCCAAGCCGCCCAACAACTAGACGATTTGCAAAAGACAGGAAAT
TTGAATCCAGACAAAGCCACGGGAATATTGAGGGATTCGCGCAATCTTGGAAAGACAGACTAA

Upstream 100 bases:

>100_bases
TGCAAGTCAGTTGATTAAACGCGACTAACGATCTAGAGATCGATATTTTTAAAGACCAGTAAAGAGTAAAATCAAATCAA
TTACCGCAAAATAACCAACT

Downstream 100 bases:

>100_bases
TCCCCAGTTTTCCAGTTTAAATATTATCTTCAAAACCAACATGAGTAACAGCTTCGGCATCGACACCCCTCCAGGTTTAA
ATCGGTTTACTCCCGATACC

Product: von Willebrand factor, type A

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 420; Mature: 420

Protein sequence:

>420_residues
MFDLELTWDRPAKLNSQQANYRDGSHVLRVRIQPKTDANLPSLPIRMAIALDTSQSMKGEKLQRAKEACLAVVSHLRDPD
YLSLAGYSTRVTPLLESLAGGGAAAGFAEGAIADLQARGVTRIDLALDWIEESLLPEKSPPLVGVLITDGHATNAGGTPL
DDMKPFIVKARNMKSCGIILCAVGLGDAANFNTSFLTDLSDQGGGAFIYADTPDKLLSDLQNRLKADQEIAIVDAKLHLT
LLASGVKATSYCRFRPEYLPLEETRPNELSLGTLRRDYPTDILISLDLPSISFGEPLGSRDIISVELTARGLETPIKKTA
AITYTTAYSEAQKVNTEVNRDRQCWEINLYSKEMIDIGNSNPKRTGELLTEIQVTAAKAGELDLASQAAQQLDDLQKTGN
LNPDKATGILRDSRNLGKTD

Sequences:

>Translated_420_residues
MFDLELTWDRPAKLNSQQANYRDGSHVLRVRIQPKTDANLPSLPIRMAIALDTSQSMKGEKLQRAKEACLAVVSHLRDPD
YLSLAGYSTRVTPLLESLAGGGAAAGFAEGAIADLQARGVTRIDLALDWIEESLLPEKSPPLVGVLITDGHATNAGGTPL
DDMKPFIVKARNMKSCGIILCAVGLGDAANFNTSFLTDLSDQGGGAFIYADTPDKLLSDLQNRLKADQEIAIVDAKLHLT
LLASGVKATSYCRFRPEYLPLEETRPNELSLGTLRRDYPTDILISLDLPSISFGEPLGSRDIISVELTARGLETPIKKTA
AITYTTAYSEAQKVNTEVNRDRQCWEINLYSKEMIDIGNSNPKRTGELLTEIQVTAAKAGELDLASQAAQQLDDLQKTGN
LNPDKATGILRDSRNLGKTD
>Mature_420_residues
MFDLELTWDRPAKLNSQQANYRDGSHVLRVRIQPKTDANLPSLPIRMAIALDTSQSMKGEKLQRAKEACLAVVSHLRDPD
YLSLAGYSTRVTPLLESLAGGGAAAGFAEGAIADLQARGVTRIDLALDWIEESLLPEKSPPLVGVLITDGHATNAGGTPL
DDMKPFIVKARNMKSCGIILCAVGLGDAANFNTSFLTDLSDQGGGAFIYADTPDKLLSDLQNRLKADQEIAIVDAKLHLT
LLASGVKATSYCRFRPEYLPLEETRPNELSLGTLRRDYPTDILISLDLPSISFGEPLGSRDIISVELTARGLETPIKKTA
AITYTTAYSEAQKVNTEVNRDRQCWEINLYSKEMIDIGNSNPKRTGELLTEIQVTAAKAGELDLASQAAQQLDDLQKTGN
LNPDKATGILRDSRNLGKTD

Specific function: Unknown

COG id: COG2304

COG function: function code R; Uncharacterized protein containing a von Willebrand factor type A (vWA) domain

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 45594; Mature: 45594

Theoretical pI: Translated: 4.91; Mature: 4.91

Prosite motif: PS50234 VWFA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFDLELTWDRPAKLNSQQANYRDGSHVLRVRIQPKTDANLPSLPIRMAIALDTSQSMKGE
CCEEEEECCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCEEEEEEECCCCCCCHH
KLQRAKEACLAVVSHLRDPDYLSLAGYSTRVTPLLESLAGGGAAAGFAEGAIADLQARGV
HHHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHCCC
TRIDLALDWIEESLLPEKSPPLVGVLITDGHATNAGGTPLDDMKPFIVKARNMKSCGIIL
EEEHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCHHCCCCHHEEECCCCCCCEEE
CAVGLGDAANFNTSFLTDLSDQGGGAFIYADTPDKLLSDLQNRLKADQEIAIVDAKLHLT
EEECCCCCCCCCCHHEECCCCCCCCEEEEECCHHHHHHHHHHHHCCCCEEEEEEEEEEEE
LLASGVKATSYCRFRPEYLPLEETRPNELSLGTLRRDYPTDILISLDLPSISFGEPLGSR
EEECCCCCCEEEEECCCCCCCCCCCCCCCEECCCCCCCCCEEEEEECCCCCCCCCCCCCC
DIISVELTARGLETPIKKTAAITYTTAYSEAQKVNTEVNRDRQCWEINLYSKEMIDIGNS
CEEEEEEECCCCCCCCHHHEEEEEEEHHHHHHHHHHHHCCCCCEEEEEECHHHHHCCCCC
NPKRTGELLTEIQVTAAKAGELDLASQAAQQLDDLQKTGNLNPDKATGILRDSRNLGKTD
CCHHHHHHHHHHEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHEECCCCCCCCCC
>Mature Secondary Structure
MFDLELTWDRPAKLNSQQANYRDGSHVLRVRIQPKTDANLPSLPIRMAIALDTSQSMKGE
CCEEEEECCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCEEEEEEECCCCCCCHH
KLQRAKEACLAVVSHLRDPDYLSLAGYSTRVTPLLESLAGGGAAAGFAEGAIADLQARGV
HHHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHCCC
TRIDLALDWIEESLLPEKSPPLVGVLITDGHATNAGGTPLDDMKPFIVKARNMKSCGIIL
EEEHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCHHCCCCHHEEECCCCCCCEEE
CAVGLGDAANFNTSFLTDLSDQGGGAFIYADTPDKLLSDLQNRLKADQEIAIVDAKLHLT
EEECCCCCCCCCCHHEECCCCCCCCEEEEECCHHHHHHHHHHHHCCCCEEEEEEEEEEEE
LLASGVKATSYCRFRPEYLPLEETRPNELSLGTLRRDYPTDILISLDLPSISFGEPLGSR
EEECCCCCCEEEEECCCCCCCCCCCCCCCEECCCCCCCCCEEEEEECCCCCCCCCCCCCC
DIISVELTARGLETPIKKTAAITYTTAYSEAQKVNTEVNRDRQCWEINLYSKEMIDIGNS
CEEEEEEECCCCCCCCHHHEEEEEEEHHHHHHHHHHHHCCCCCEEEEEECHHHHHCCCCC
NPKRTGELLTEIQVTAAKAGELDLASQAAQQLDDLQKTGNLNPDKATGILRDSRNLGKTD
CCHHHHHHHHHHEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA