| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is 113476688
Identifier: 113476688
GI number: 113476688
Start: 4802958
End: 4803362
Strand: Reverse
Name: 113476688
Synonym: Tery_3146
Alternate gene names: NA
Gene position: 4803362-4802958 (Counterclockwise)
Preceding gene: 113476689
Following gene: 113476687
Centisome position: 61.98
GC content: 45.19
Gene sequence:
>405_bases ATGAGTAACAGCTTCGGCATCGACACCCCTCCAGGTTTAAATCGGTTTACTCCCGATACCGCACAACTGCAGGTACTCAA TGGACCTGGAGCCCACAGGATATTTCCCCTCAACCAGATGCGAATAGTTATTGGTCGCAACGACCCACCCAATATCAAAG TAGACATCAATTTAACTGATTGCGAAATCGGTAGTCCGCCAGCTATATCCCGCCGTCATGCAGAGATTGAGTGGGTAGGA TGCAACCTGCAAATTGTAGATTTAGGCAGTAGTAACGGCACTTTTGTAGATGGAGAAAAGCTCTCTCCCGTTATCCCCAA CCAGCCCTCATCTCCTGTCAGTTTAAAACCAGGAAGTCAGGTCAAACTAGGTAATTTAAAATTTGAGGTGATAATTAATG AATAA
Upstream 100 bases:
>100_bases AATCCAGACAAAGCCACGGGAATATTGAGGGATTCGCGCAATCTTGGAAAGACAGACTAATCCCCAGTTTTCCAGTTTAA ATATTATCTTCAAAACCAAC
Downstream 100 bases:
>100_bases ACCATTAGTGGTAGGGTCCCTAACTCGTGAAGTCAAAACCCATCGGGGCAACAAGCGGGAAATCAATCAAGATAATTATT TGCTGGAACTCTGGGAAGAC
Product: FHA domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 134; Mature: 133
Protein sequence:
>134_residues MSNSFGIDTPPGLNRFTPDTAQLQVLNGPGAHRIFPLNQMRIVIGRNDPPNIKVDINLTDCEIGSPPAISRRHAEIEWVG CNLQIVDLGSSNGTFVDGEKLSPVIPNQPSSPVSLKPGSQVKLGNLKFEVIINE
Sequences:
>Translated_134_residues MSNSFGIDTPPGLNRFTPDTAQLQVLNGPGAHRIFPLNQMRIVIGRNDPPNIKVDINLTDCEIGSPPAISRRHAEIEWVG CNLQIVDLGSSNGTFVDGEKLSPVIPNQPSSPVSLKPGSQVKLGNLKFEVIINE >Mature_133_residues SNSFGIDTPPGLNRFTPDTAQLQVLNGPGAHRIFPLNQMRIVIGRNDPPNIKVDINLTDCEIGSPPAISRRHAEIEWVGC NLQIVDLGSSNGTFVDGEKLSPVIPNQPSSPVSLKPGSQVKLGNLKFEVIINE
Specific function: Unknown
COG id: COG1716
COG function: function code T; FOG: FHA domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14479; Mature: 14347
Theoretical pI: Translated: 5.69; Mature: 5.69
Prosite motif: PS50006 FHA_DOMAIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNSFGIDTPPGLNRFTPDTAQLQVLNGPGAHRIFPLNQMRIVIGRNDPPNIKVDINLTD CCCCCCCCCCCCCCCCCCCCEEEEEECCCCCEEEEECCCEEEEEECCCCCCEEEEEEEEE CEIGSPPAISRRHAEIEWVGCNLQIVDLGSSNGTFVDGEKLSPVIPNQPSSPVSLKPGSQ CCCCCCCCCCCCCCEEEEECCCEEEEECCCCCCCEEECCCCCCCCCCCCCCCEEECCCCE VKLGNLKFEVIINE EEECCEEEEEEEEC >Mature Secondary Structure SNSFGIDTPPGLNRFTPDTAQLQVLNGPGAHRIFPLNQMRIVIGRNDPPNIKVDINLTD CCCCCCCCCCCCCCCCCCCEEEEEECCCCCEEEEECCCEEEEEECCCCCCEEEEEEEEE CEIGSPPAISRRHAEIEWVGCNLQIVDLGSSNGTFVDGEKLSPVIPNQPSSPVSLKPGSQ CCCCCCCCCCCCCCEEEEECCCEEEEECCCCCCCEEECCCCCCCCCCCCCCCEEECCCCE VKLGNLKFEVIINE EEECCEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA