| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is stp [H]
Identifier: 113476687
GI number: 113476687
Start: 4802150
End: 4802965
Strand: Reverse
Name: stp [H]
Synonym: Tery_3145
Alternate gene names: 113476687
Gene position: 4802965-4802150 (Counterclockwise)
Preceding gene: 113476688
Following gene: 113476684
Centisome position: 61.97
GC content: 44.24
Gene sequence:
>816_bases ATGAATAAACCATTAGTGGTAGGGTCCCTAACTCGTGAAGTCAAAACCCATCGGGGCAACAAGCGGGAAATCAATCAAGA TAATTATTTGCTGGAACTCTGGGAAGACGAAACTGCCATATTAGCCGTAGTAGCTGATGGTATGGGAGGAAATAAAGGAG GAGAGGTAGCCTCAAAAATTGCTGTGGATACCTTTCGGGGATTGCTGGAACAACCCTTTCCCCCAGAAGCTTTTGGACGA TATGAATTACTGCTCAAAGGATTTTACGAAGCTGATCGCGCCATTCGAGAGCAAGCTTCTCAAGACTTCAAATTGATGAA TATGGGGACAACGATAATAGCAGCGATCGTCACCCCCACAGAATTAATCCATCTCTATGCCGGAGACTGTCGCTTATACC ACTTTAGTTGTAACTCTCCCCCCTACATCACCGCCGATCATTCAGTAGTAGGGGTACTCCTGGAGTTAGGAAAAATTACC CCTGAAGAAGTGTCGAGTCATCCGATGCGTTCCGTCGTTAACTCTTGTTTGGGAGGCAGGGGAAAAGCACAATTATCTAT TGACCCAAAATGGGATTCTCCCCCTTCACCAGTAAGAAAATTGCATTCTGGAGATTTATTGTTGTTGTGCAGCGACGGGT TACATGGAGAAGTAAGTCAGGAAGTATTAGAAAGTTTGGTCGAACAGTTTAGAGATTCGTCAGAAAAGCTAACAAAGGCT TGTGTAAAAGCAGCTTTAGAGAATGGGGGCAAGGATAATATTACCGTAATTGCGATTAGAGTGAAGAAGAACTCACGGGG TGAAAAGCAAGCTTAA
Upstream 100 bases:
>100_bases AAGCTCTCTCCCGTTATCCCCAACCAGCCCTCATCTCCTGTCAGTTTAAAACCAGGAAGTCAGGTCAAACTAGGTAATTT AAAATTTGAGGTGATAATTA
Downstream 100 bases:
>100_bases TGGTAGATTTAATAAAAATTTGAGGCAATAACTTGAGAGGATATCTGTAAATAAAACCTTAAGGGACAAGGCGATTTAAA ATCAGTGAAATCATAGCTAT
Product: protein serine/threonine phosphatase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 271; Mature: 271
Protein sequence:
>271_residues MNKPLVVGSLTREVKTHRGNKREINQDNYLLELWEDETAILAVVADGMGGNKGGEVASKIAVDTFRGLLEQPFPPEAFGR YELLLKGFYEADRAIREQASQDFKLMNMGTTIIAAIVTPTELIHLYAGDCRLYHFSCNSPPYITADHSVVGVLLELGKIT PEEVSSHPMRSVVNSCLGGRGKAQLSIDPKWDSPPSPVRKLHSGDLLLLCSDGLHGEVSQEVLESLVEQFRDSSEKLTKA CVKAALENGGKDNITVIAIRVKKNSRGEKQA
Sequences:
>Translated_271_residues MNKPLVVGSLTREVKTHRGNKREINQDNYLLELWEDETAILAVVADGMGGNKGGEVASKIAVDTFRGLLEQPFPPEAFGR YELLLKGFYEADRAIREQASQDFKLMNMGTTIIAAIVTPTELIHLYAGDCRLYHFSCNSPPYITADHSVVGVLLELGKIT PEEVSSHPMRSVVNSCLGGRGKAQLSIDPKWDSPPSPVRKLHSGDLLLLCSDGLHGEVSQEVLESLVEQFRDSSEKLTKA CVKAALENGGKDNITVIAIRVKKNSRGEKQA >Mature_271_residues MNKPLVVGSLTREVKTHRGNKREINQDNYLLELWEDETAILAVVADGMGGNKGGEVASKIAVDTFRGLLEQPFPPEAFGR YELLLKGFYEADRAIREQASQDFKLMNMGTTIIAAIVTPTELIHLYAGDCRLYHFSCNSPPYITADHSVVGVLLELGKIT PEEVSSHPMRSVVNSCLGGRGKAQLSIDPKWDSPPSPVRKLHSGDLLLLCSDGLHGEVSQEVLESLVEQFRDSSEKLTKA CVKAALENGGKDNITVIAIRVKKNSRGEKQA
Specific function: Protein phosphatase that dephosphorylates EF-Tu [H]
COG id: COG0631
COG function: function code T; Serine/threonine protein phosphatase
Gene ontology:
Cell location: Cytoplasm. Membrane; Peripheral membrane protein [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PP2C-like domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015655 - InterPro: IPR001932 - InterPro: IPR014045 [H]
Pfam domain/function: PF00481 PP2C [H]
EC number: =3.1.3.16 [H]
Molecular weight: Translated: 29698; Mature: 29698
Theoretical pI: Translated: 6.40; Mature: 6.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKPLVVGSLTREVKTHRGNKREINQDNYLLELWEDETAILAVVADGMGGNKGGEVASKI CCCCEEEHHHHHHHHHCCCCCCCCCCCCEEEEEECCCEEEEEEEECCCCCCCCHHHHHHH AVDTFRGLLEQPFPPEAFGRYELLLKGFYEADRAIREQASQDFKLMNMGTTIIAAIVTPT HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCHHHHHHHHCHH ELIHLYAGDCRLYHFSCNSPPYITADHSVVGVLLELGKITPEEVSSHPMRSVVNSCLGGR HHHEEEECCEEEEEEECCCCCEEEECHHHHHHHHHHCCCCHHHHHCCHHHHHHHHHHCCC GKAQLSIDPKWDSPPSPVRKLHSGDLLLLCSDGLHGEVSQEVLESLVEQFRDSSEKLTKA CCEEEEECCCCCCCCHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCHHHHHHH CVKAALENGGKDNITVIAIRVKKNSRGEKQA HHHHHHHCCCCCCEEEEEEEEECCCCCCCCC >Mature Secondary Structure MNKPLVVGSLTREVKTHRGNKREINQDNYLLELWEDETAILAVVADGMGGNKGGEVASKI CCCCEEEHHHHHHHHHCCCCCCCCCCCCEEEEEECCCEEEEEEEECCCCCCCCHHHHHHH AVDTFRGLLEQPFPPEAFGRYELLLKGFYEADRAIREQASQDFKLMNMGTTIIAAIVTPT HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCHHHHHHHHCHH ELIHLYAGDCRLYHFSCNSPPYITADHSVVGVLLELGKITPEEVSSHPMRSVVNSCLGGR HHHEEEECCEEEEEEECCCCCEEEECHHHHHHHHHHCCCCHHHHHCCHHHHHHHHHHCCC GKAQLSIDPKWDSPPSPVRKLHSGDLLLLCSDGLHGEVSQEVLESLVEQFRDSSEKLTKA CCEEEEECCCCCCCCHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCHHHHHHH CVKAALENGGKDNITVIAIRVKKNSRGEKQA HHHHHHHCCCCCCEEEEEEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11679669 [H]