Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113476100

Identifier: 113476100

GI number: 113476100

Start: 3816901

End: 3817908

Strand: Direct

Name: 113476100

Synonym: Tery_2479

Alternate gene names: NA

Gene position: 3816901-3817908 (Clockwise)

Preceding gene: 113476091

Following gene: 113476103

Centisome position: 49.25

GC content: 31.75

Gene sequence:

>1008_bases
ATGGCAAATATTACAGAACTCCAAGCAAATCTCTTAAAAATGCAGCAACTACTAAACGCTGCCGACAATGAAACTAAAAA
GAAAACTTTTCAAGATATTGTTAATAATTTATCTCAACAATTAGAAAACGAAAAATCTAAATTAAACCCTCTTACAGCAG
AGGAATTAAAAGTTAATCAGCCTCCCAAAAGAAAGATAATTAAACAATCAACTCAGCAGGCACAAACTTCAACTCAAAAA
CCTCAAGAATTACATCCGAAATATAAATCTAAAATTGAACTTAAATCAGAAGTTAAACTAGAAGAAAAATCAGAAAACCA
AGAATATGAAAGTTTATTACCAAAGCAGGATTATCTTTTTCAAGGTTTAGGAGTTCTATACGGTAAAATAATTCAAAGAT
ATGAGAACAATGATAATTATTACAACGTAATTATCAACGATAAAACCTATGAATTAATTATTGTTTATCCTAGAGTTAGA
GACTTTATTAAAAAACATTATAGCCCTGAAAAAGACAGATACTTAACTGTTTATCCCAACCTGGTACATTATCCACAAAC
TAGAGAAAAAAATAAGCCTCCTAAAATAAGTTTTACTATTATTGCTGCAAATGACTCACCATACTTAGAGTTGGAGCCCA
ATGAATTTAAATTATTTGGACTATGGCAATTTATAGCTGTGTCCAAATGTCCTGTAATGAGTATTCATAGAAATCGGGAA
AAAGATGGAAACGATCGCGTATGGCCTCTCAAAACAAAATTCAAGGATAATAATAAGTTACACAAAAATCTAACTAGAGC
TAATCATGTTCCTTTATTATGGAAAAATGCACCTGTTAAGCCTTTTAGGTTTAACCCTAGACTTGATAAGGATCAACAAG
GCGATCGCTATTTCTGCCAAGTGAAAGCTAAATTTCTTGCTGATCGAAGTGTTTGGGGTTTCCACGAGTTACTTGCAGAA
CCTACTCTCGATATTCCCAAGTTCTATAAGCCTATAAAAGTAGTTTGA

Upstream 100 bases:

>100_bases
ATAATTTTTTTATCCACACATCATCTAGAAAAATTATCAGAGTCTCAAAAAAAAATACTTAGAGAAACGCCAGCAATATT
TTGTAGAAGAACTAAAAACC

Downstream 100 bases:

>100_bases
ACTACCCAAAGTTGACCTAAAAATTTGGTCAATAGCTCACCTTTTCAAGGCTCGATAAAAAAAAATAAACTTTAGTACTT
CAAGGCTCTCACTTGAGCCA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 335; Mature: 334

Protein sequence:

>335_residues
MANITELQANLLKMQQLLNAADNETKKKTFQDIVNNLSQQLENEKSKLNPLTAEELKVNQPPKRKIIKQSTQQAQTSTQK
PQELHPKYKSKIELKSEVKLEEKSENQEYESLLPKQDYLFQGLGVLYGKIIQRYENNDNYYNVIINDKTYELIIVYPRVR
DFIKKHYSPEKDRYLTVYPNLVHYPQTREKNKPPKISFTIIAANDSPYLELEPNEFKLFGLWQFIAVSKCPVMSIHRNRE
KDGNDRVWPLKTKFKDNNKLHKNLTRANHVPLLWKNAPVKPFRFNPRLDKDQQGDRYFCQVKAKFLADRSVWGFHELLAE
PTLDIPKFYKPIKVV

Sequences:

>Translated_335_residues
MANITELQANLLKMQQLLNAADNETKKKTFQDIVNNLSQQLENEKSKLNPLTAEELKVNQPPKRKIIKQSTQQAQTSTQK
PQELHPKYKSKIELKSEVKLEEKSENQEYESLLPKQDYLFQGLGVLYGKIIQRYENNDNYYNVIINDKTYELIIVYPRVR
DFIKKHYSPEKDRYLTVYPNLVHYPQTREKNKPPKISFTIIAANDSPYLELEPNEFKLFGLWQFIAVSKCPVMSIHRNRE
KDGNDRVWPLKTKFKDNNKLHKNLTRANHVPLLWKNAPVKPFRFNPRLDKDQQGDRYFCQVKAKFLADRSVWGFHELLAE
PTLDIPKFYKPIKVV
>Mature_334_residues
ANITELQANLLKMQQLLNAADNETKKKTFQDIVNNLSQQLENEKSKLNPLTAEELKVNQPPKRKIIKQSTQQAQTSTQKP
QELHPKYKSKIELKSEVKLEEKSENQEYESLLPKQDYLFQGLGVLYGKIIQRYENNDNYYNVIINDKTYELIIVYPRVRD
FIKKHYSPEKDRYLTVYPNLVHYPQTREKNKPPKISFTIIAANDSPYLELEPNEFKLFGLWQFIAVSKCPVMSIHRNREK
DGNDRVWPLKTKFKDNNKLHKNLTRANHVPLLWKNAPVKPFRFNPRLDKDQQGDRYFCQVKAKFLADRSVWGFHELLAEP
TLDIPKFYKPIKVV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 39562; Mature: 39431

Theoretical pI: Translated: 10.01; Mature: 10.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MANITELQANLLKMQQLLNAADNETKKKTFQDIVNNLSQQLENEKSKLNPLTAEELKVNQ
CCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCC
PPKRKIIKQSTQQAQTSTQKPQELHPKYKSKIELKSEVKLEEKSENQEYESLLPKQDYLF
CHHHHHHHHHHHHHHHHCCCCHHHCCHHHHCCCHHHHCCCHHHHCCCHHHHHCCCHHHHH
QGLGVLYGKIIQRYENNDNYYNVIINDKTYELIIVYPRVRDFIKKHYSPEKDRYLTVYPN
HHHHHHHHHHHHHHCCCCCEEEEEECCCCEEEEEECHHHHHHHHHHCCCCCCCEEEECCC
LVHYPQTREKNKPPKISFTIIAANDSPYLELEPNEFKLFGLWQFIAVSKCPVMSIHRNRE
CCCCCCCCCCCCCCEEEEEEEEECCCCEEEECCCCEEEEEHHHHHHHCCCCCHHHHCCCC
KDGNDRVWPLKTKFKDNNKLHKNLTRANHVPLLWKNAPVKPFRFNPRLDKDQQGDRYFCQ
CCCCCCEEEEECCCCCCCHHHHHHHHCCCCCEEECCCCCCCEECCCCCCCCCCCCEEEEE
VKAKFLADRSVWGFHELLAEPTLDIPKFYKPIKVV
EHHHHHHCCCHHHHHHHHHCCCCCCHHHCCCCCCC
>Mature Secondary Structure 
ANITELQANLLKMQQLLNAADNETKKKTFQDIVNNLSQQLENEKSKLNPLTAEELKVNQ
CCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCC
PPKRKIIKQSTQQAQTSTQKPQELHPKYKSKIELKSEVKLEEKSENQEYESLLPKQDYLF
CHHHHHHHHHHHHHHHHCCCCHHHCCHHHHCCCHHHHCCCHHHHCCCHHHHHCCCHHHHH
QGLGVLYGKIIQRYENNDNYYNVIINDKTYELIIVYPRVRDFIKKHYSPEKDRYLTVYPN
HHHHHHHHHHHHHHCCCCCEEEEEECCCCEEEEEECHHHHHHHHHHCCCCCCCEEEECCC
LVHYPQTREKNKPPKISFTIIAANDSPYLELEPNEFKLFGLWQFIAVSKCPVMSIHRNRE
CCCCCCCCCCCCCCEEEEEEEEECCCCEEEECCCCEEEEEHHHHHHHCCCCCHHHHCCCC
KDGNDRVWPLKTKFKDNNKLHKNLTRANHVPLLWKNAPVKPFRFNPRLDKDQQGDRYFCQ
CCCCCCEEEEECCCCCCCHHHHHHHHCCCCCEEECCCCCCCEECCCCCCCCCCCCEEEEE
VKAKFLADRSVWGFHELLAEPTLDIPKFYKPIKVV
EHHHHHHCCCHHHHHHHHHCCCCCCHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA