| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is 113476091
Identifier: 113476091
GI number: 113476091
Start: 3797171
End: 3798571
Strand: Direct
Name: 113476091
Synonym: Tery_2469
Alternate gene names: NA
Gene position: 3797171-3798571 (Clockwise)
Preceding gene: 113476090
Following gene: 113476100
Centisome position: 49.0
GC content: 31.55
Gene sequence:
>1401_bases ATGCTCAATATTATTAATCCTACCATTGACTTATTTCTCTATGACTTAAGAAATAGTCTGAGTGATAATGAAAAAAGTAT AGGGGAAAAACGCGAATATTTTTATCAAAAGTTCGATGAAACTGTTCAGGAAAGGTTAAAAGAAGACGGAAAGGATCTCG ACCAAAGGCAGAAGCAAGAGGTTGGATATATTCAACTTCTTAAGGATATTTATGCTCCTTTAGATCCTGATACTCCTATA GAGAATGGTTATTACTATCCAGTACGGTTAGGAGATAGTTATGGACTGTTATTGGAGGTTGCTGAAGTTAATGGTTCTCA GGAAAAAACTCCAGAATATTTTGCTGAGTTAAAGGAAAGAATTCAACGAAAGTTAGGGGATAATAAAGCTACATTAGGTC AGACTTGGATGTTGTCTACTTACTTACCTAATTTCTCGGAAATAACTTCAGCAGAAATAGAACAAATTGCTCAAGAGTCT TACAAAGCTATTTTTCCTAATACAAAAGAAGAAGTTAAGTTTCACAAGAAAGGTGAGTTTATTGGTGCTACAATTTTTGA GTATTCTGACAAGGGTTTTAAGGAGGAGGTAGTTAAGTTAGGAGAGAAAGAAAATTCTATTTTTGTGCAAAATAAACATG TTATTGTTGCTATTTATCCAGATAAAGAAAGTTTCGAGATTTTAAGTGAGTTATATACGGACTGGATGTCCTTATTATAT TACCATCACAAAATTATTTGGGCTTATGGTCAAGGTTCTGTTTTAATCAATAAAGCTAAGAAAATGTTTGCTAAAGTTTA TTCTATAACTGGGTCTATAGAAGAAAAGGTTACTGAAGGGAATGGTAAGGTTAATAGGTTGGAGGAAATTGGTTCTATTC TGAGGAAAGTTCAGGTTATTATGAATCAATACACGAATAATATGAATAATCTTCAGTTTCAAAAGGTTACAATACAAATT AATTTAAGTAATTATGAGAAAAGATTAAAAACTATTTCTAAAAATGCTACTGAAAAGGTGCCTGGTTCTCGAACTAATAT TGATTTTTTGGATGATTTTAGCAAGTTGGTTAAAGATAAGTATCTTTGGCAAATTAAAGAATATTTAGAAAGTTTTGAGT TAGGTTTGAGGTTATTAGAGAATAATATTAATGCTATTCGTAGCCAAACAGAAATAGAAAGGGCTAAGGTAGATCGCGAT TTTAAAGGGTTAATTAGTGTGGTAGCTACAGGAGTTGCTATTGCTGGTTTAACAGGAGATAATGCGGCTACGGAATGTAA GTCTATTTTTAATGATAGGTTTTTTCTTTGTCAAAATACGTTTGTATATAATATAACCTTAGTTTTCTTTGTTAGTTTGT TAATTTGGCTTTTGAGAAAGTATATATTAAAGCGATCGTAG
Upstream 100 bases:
>100_bases ATCAACTTTTTTCTGAACATAAAGTTTGATAAATGAAAAGGAATTTTCTAGTTTTTAAGCCTCTAGCTCAAGTCGGAAAT ACTAATAACTAATAACTGAA
Downstream 100 bases:
>100_bases AAGTTGGGGGTTAAAATTTAAGGGTTAAAAGGCAATGGTTAAGCTAAATTTTTTTCCCCCCAAGGAGGTAAGTTAGAGGT TAAAAGTTAGAGGTTAAAGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 466; Mature: 466
Protein sequence:
>466_residues MLNIINPTIDLFLYDLRNSLSDNEKSIGEKREYFYQKFDETVQERLKEDGKDLDQRQKQEVGYIQLLKDIYAPLDPDTPI ENGYYYPVRLGDSYGLLLEVAEVNGSQEKTPEYFAELKERIQRKLGDNKATLGQTWMLSTYLPNFSEITSAEIEQIAQES YKAIFPNTKEEVKFHKKGEFIGATIFEYSDKGFKEEVVKLGEKENSIFVQNKHVIVAIYPDKESFEILSELYTDWMSLLY YHHKIIWAYGQGSVLINKAKKMFAKVYSITGSIEEKVTEGNGKVNRLEEIGSILRKVQVIMNQYTNNMNNLQFQKVTIQI NLSNYEKRLKTISKNATEKVPGSRTNIDFLDDFSKLVKDKYLWQIKEYLESFELGLRLLENNINAIRSQTEIERAKVDRD FKGLISVVATGVAIAGLTGDNAATECKSIFNDRFFLCQNTFVYNITLVFFVSLLIWLLRKYILKRS
Sequences:
>Translated_466_residues MLNIINPTIDLFLYDLRNSLSDNEKSIGEKREYFYQKFDETVQERLKEDGKDLDQRQKQEVGYIQLLKDIYAPLDPDTPI ENGYYYPVRLGDSYGLLLEVAEVNGSQEKTPEYFAELKERIQRKLGDNKATLGQTWMLSTYLPNFSEITSAEIEQIAQES YKAIFPNTKEEVKFHKKGEFIGATIFEYSDKGFKEEVVKLGEKENSIFVQNKHVIVAIYPDKESFEILSELYTDWMSLLY YHHKIIWAYGQGSVLINKAKKMFAKVYSITGSIEEKVTEGNGKVNRLEEIGSILRKVQVIMNQYTNNMNNLQFQKVTIQI NLSNYEKRLKTISKNATEKVPGSRTNIDFLDDFSKLVKDKYLWQIKEYLESFELGLRLLENNINAIRSQTEIERAKVDRD FKGLISVVATGVAIAGLTGDNAATECKSIFNDRFFLCQNTFVYNITLVFFVSLLIWLLRKYILKRS >Mature_466_residues MLNIINPTIDLFLYDLRNSLSDNEKSIGEKREYFYQKFDETVQERLKEDGKDLDQRQKQEVGYIQLLKDIYAPLDPDTPI ENGYYYPVRLGDSYGLLLEVAEVNGSQEKTPEYFAELKERIQRKLGDNKATLGQTWMLSTYLPNFSEITSAEIEQIAQES YKAIFPNTKEEVKFHKKGEFIGATIFEYSDKGFKEEVVKLGEKENSIFVQNKHVIVAIYPDKESFEILSELYTDWMSLLY YHHKIIWAYGQGSVLINKAKKMFAKVYSITGSIEEKVTEGNGKVNRLEEIGSILRKVQVIMNQYTNNMNNLQFQKVTIQI NLSNYEKRLKTISKNATEKVPGSRTNIDFLDDFSKLVKDKYLWQIKEYLESFELGLRLLENNINAIRSQTEIERAKVDRD FKGLISVVATGVAIAGLTGDNAATECKSIFNDRFFLCQNTFVYNITLVFFVSLLIWLLRKYILKRS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 54072; Mature: 54072
Theoretical pI: Translated: 5.93; Mature: 5.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLNIINPTIDLFLYDLRNSLSDNEKSIGEKREYFYQKFDETVQERLKEDGKDLDQRQKQE CCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH VGYIQLLKDIYAPLDPDTPIENGYYYPVRLGDSYGLLLEVAEVNGSQEKTPEYFAELKER HHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCCEEEEEECCCCCCCCCHHHHHHHHHH IQRKLGDNKATLGQTWMLSTYLPNFSEITSAEIEQIAQESYKAIFPNTKEEVKFHKKGEF HHHHHCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCC IGATIFEYSDKGFKEEVVKLGEKENSIFVQNKHVIVAIYPDKESFEILSELYTDWMSLLY CEEHHHHHCCCCHHHHHHHHCCCCCCEEEECCEEEEEEECCCHHHHHHHHHHHHHHHHHH YHHKIIWAYGQGSVLINKAKKMFAKVYSITGSIEEKVTEGNGKVNRLEEIGSILRKVQVI HHHHEEEEECCCCCHHHHHHHHHHHHHHHHCHHHHHHHCCCCCHHHHHHHHHHHHHHHHH MNQYTNNMNNLQFQKVTIQINLSNYEKRLKTISKNATEKVPGSRTNIDFLDDFSKLVKDK HHHHHCCCCCEEEEEEEEEEECHHHHHHHHHHHCCCHHCCCCCCCCCHHHHHHHHHHHHH YLWQIKEYLESFELGLRLLENNINAIRSQTEIERAKVDRDFKGLISVVATGVAIAGLTGD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHEECCCC NAATECKSIFNDRFFLCQNTFVYNITLVFFVSLLIWLLRKYILKRS CHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MLNIINPTIDLFLYDLRNSLSDNEKSIGEKREYFYQKFDETVQERLKEDGKDLDQRQKQE CCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH VGYIQLLKDIYAPLDPDTPIENGYYYPVRLGDSYGLLLEVAEVNGSQEKTPEYFAELKER HHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCCEEEEEECCCCCCCCCHHHHHHHHHH IQRKLGDNKATLGQTWMLSTYLPNFSEITSAEIEQIAQESYKAIFPNTKEEVKFHKKGEF HHHHHCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCC IGATIFEYSDKGFKEEVVKLGEKENSIFVQNKHVIVAIYPDKESFEILSELYTDWMSLLY CEEHHHHHCCCCHHHHHHHHCCCCCCEEEECCEEEEEEECCCHHHHHHHHHHHHHHHHHH YHHKIIWAYGQGSVLINKAKKMFAKVYSITGSIEEKVTEGNGKVNRLEEIGSILRKVQVI HHHHEEEEECCCCCHHHHHHHHHHHHHHHHCHHHHHHHCCCCCHHHHHHHHHHHHHHHHH MNQYTNNMNNLQFQKVTIQINLSNYEKRLKTISKNATEKVPGSRTNIDFLDDFSKLVKDK HHHHHCCCCCEEEEEEEEEEECHHHHHHHHHHHCCCHHCCCCCCCCCHHHHHHHHHHHHH YLWQIKEYLESFELGLRLLENNINAIRSQTEIERAKVDRDFKGLISVVATGVAIAGLTGD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHEECCCC NAATECKSIFNDRFFLCQNTFVYNITLVFFVSLLIWLLRKYILKRS CHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA