Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113476091

Identifier: 113476091

GI number: 113476091

Start: 3797171

End: 3798571

Strand: Direct

Name: 113476091

Synonym: Tery_2469

Alternate gene names: NA

Gene position: 3797171-3798571 (Clockwise)

Preceding gene: 113476090

Following gene: 113476100

Centisome position: 49.0

GC content: 31.55

Gene sequence:

>1401_bases
ATGCTCAATATTATTAATCCTACCATTGACTTATTTCTCTATGACTTAAGAAATAGTCTGAGTGATAATGAAAAAAGTAT
AGGGGAAAAACGCGAATATTTTTATCAAAAGTTCGATGAAACTGTTCAGGAAAGGTTAAAAGAAGACGGAAAGGATCTCG
ACCAAAGGCAGAAGCAAGAGGTTGGATATATTCAACTTCTTAAGGATATTTATGCTCCTTTAGATCCTGATACTCCTATA
GAGAATGGTTATTACTATCCAGTACGGTTAGGAGATAGTTATGGACTGTTATTGGAGGTTGCTGAAGTTAATGGTTCTCA
GGAAAAAACTCCAGAATATTTTGCTGAGTTAAAGGAAAGAATTCAACGAAAGTTAGGGGATAATAAAGCTACATTAGGTC
AGACTTGGATGTTGTCTACTTACTTACCTAATTTCTCGGAAATAACTTCAGCAGAAATAGAACAAATTGCTCAAGAGTCT
TACAAAGCTATTTTTCCTAATACAAAAGAAGAAGTTAAGTTTCACAAGAAAGGTGAGTTTATTGGTGCTACAATTTTTGA
GTATTCTGACAAGGGTTTTAAGGAGGAGGTAGTTAAGTTAGGAGAGAAAGAAAATTCTATTTTTGTGCAAAATAAACATG
TTATTGTTGCTATTTATCCAGATAAAGAAAGTTTCGAGATTTTAAGTGAGTTATATACGGACTGGATGTCCTTATTATAT
TACCATCACAAAATTATTTGGGCTTATGGTCAAGGTTCTGTTTTAATCAATAAAGCTAAGAAAATGTTTGCTAAAGTTTA
TTCTATAACTGGGTCTATAGAAGAAAAGGTTACTGAAGGGAATGGTAAGGTTAATAGGTTGGAGGAAATTGGTTCTATTC
TGAGGAAAGTTCAGGTTATTATGAATCAATACACGAATAATATGAATAATCTTCAGTTTCAAAAGGTTACAATACAAATT
AATTTAAGTAATTATGAGAAAAGATTAAAAACTATTTCTAAAAATGCTACTGAAAAGGTGCCTGGTTCTCGAACTAATAT
TGATTTTTTGGATGATTTTAGCAAGTTGGTTAAAGATAAGTATCTTTGGCAAATTAAAGAATATTTAGAAAGTTTTGAGT
TAGGTTTGAGGTTATTAGAGAATAATATTAATGCTATTCGTAGCCAAACAGAAATAGAAAGGGCTAAGGTAGATCGCGAT
TTTAAAGGGTTAATTAGTGTGGTAGCTACAGGAGTTGCTATTGCTGGTTTAACAGGAGATAATGCGGCTACGGAATGTAA
GTCTATTTTTAATGATAGGTTTTTTCTTTGTCAAAATACGTTTGTATATAATATAACCTTAGTTTTCTTTGTTAGTTTGT
TAATTTGGCTTTTGAGAAAGTATATATTAAAGCGATCGTAG

Upstream 100 bases:

>100_bases
ATCAACTTTTTTCTGAACATAAAGTTTGATAAATGAAAAGGAATTTTCTAGTTTTTAAGCCTCTAGCTCAAGTCGGAAAT
ACTAATAACTAATAACTGAA

Downstream 100 bases:

>100_bases
AAGTTGGGGGTTAAAATTTAAGGGTTAAAAGGCAATGGTTAAGCTAAATTTTTTTCCCCCCAAGGAGGTAAGTTAGAGGT
TAAAAGTTAGAGGTTAAAGG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 466; Mature: 466

Protein sequence:

>466_residues
MLNIINPTIDLFLYDLRNSLSDNEKSIGEKREYFYQKFDETVQERLKEDGKDLDQRQKQEVGYIQLLKDIYAPLDPDTPI
ENGYYYPVRLGDSYGLLLEVAEVNGSQEKTPEYFAELKERIQRKLGDNKATLGQTWMLSTYLPNFSEITSAEIEQIAQES
YKAIFPNTKEEVKFHKKGEFIGATIFEYSDKGFKEEVVKLGEKENSIFVQNKHVIVAIYPDKESFEILSELYTDWMSLLY
YHHKIIWAYGQGSVLINKAKKMFAKVYSITGSIEEKVTEGNGKVNRLEEIGSILRKVQVIMNQYTNNMNNLQFQKVTIQI
NLSNYEKRLKTISKNATEKVPGSRTNIDFLDDFSKLVKDKYLWQIKEYLESFELGLRLLENNINAIRSQTEIERAKVDRD
FKGLISVVATGVAIAGLTGDNAATECKSIFNDRFFLCQNTFVYNITLVFFVSLLIWLLRKYILKRS

Sequences:

>Translated_466_residues
MLNIINPTIDLFLYDLRNSLSDNEKSIGEKREYFYQKFDETVQERLKEDGKDLDQRQKQEVGYIQLLKDIYAPLDPDTPI
ENGYYYPVRLGDSYGLLLEVAEVNGSQEKTPEYFAELKERIQRKLGDNKATLGQTWMLSTYLPNFSEITSAEIEQIAQES
YKAIFPNTKEEVKFHKKGEFIGATIFEYSDKGFKEEVVKLGEKENSIFVQNKHVIVAIYPDKESFEILSELYTDWMSLLY
YHHKIIWAYGQGSVLINKAKKMFAKVYSITGSIEEKVTEGNGKVNRLEEIGSILRKVQVIMNQYTNNMNNLQFQKVTIQI
NLSNYEKRLKTISKNATEKVPGSRTNIDFLDDFSKLVKDKYLWQIKEYLESFELGLRLLENNINAIRSQTEIERAKVDRD
FKGLISVVATGVAIAGLTGDNAATECKSIFNDRFFLCQNTFVYNITLVFFVSLLIWLLRKYILKRS
>Mature_466_residues
MLNIINPTIDLFLYDLRNSLSDNEKSIGEKREYFYQKFDETVQERLKEDGKDLDQRQKQEVGYIQLLKDIYAPLDPDTPI
ENGYYYPVRLGDSYGLLLEVAEVNGSQEKTPEYFAELKERIQRKLGDNKATLGQTWMLSTYLPNFSEITSAEIEQIAQES
YKAIFPNTKEEVKFHKKGEFIGATIFEYSDKGFKEEVVKLGEKENSIFVQNKHVIVAIYPDKESFEILSELYTDWMSLLY
YHHKIIWAYGQGSVLINKAKKMFAKVYSITGSIEEKVTEGNGKVNRLEEIGSILRKVQVIMNQYTNNMNNLQFQKVTIQI
NLSNYEKRLKTISKNATEKVPGSRTNIDFLDDFSKLVKDKYLWQIKEYLESFELGLRLLENNINAIRSQTEIERAKVDRD
FKGLISVVATGVAIAGLTGDNAATECKSIFNDRFFLCQNTFVYNITLVFFVSLLIWLLRKYILKRS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 54072; Mature: 54072

Theoretical pI: Translated: 5.93; Mature: 5.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLNIINPTIDLFLYDLRNSLSDNEKSIGEKREYFYQKFDETVQERLKEDGKDLDQRQKQE
CCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
VGYIQLLKDIYAPLDPDTPIENGYYYPVRLGDSYGLLLEVAEVNGSQEKTPEYFAELKER
HHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCCEEEEEECCCCCCCCCHHHHHHHHHH
IQRKLGDNKATLGQTWMLSTYLPNFSEITSAEIEQIAQESYKAIFPNTKEEVKFHKKGEF
HHHHHCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCC
IGATIFEYSDKGFKEEVVKLGEKENSIFVQNKHVIVAIYPDKESFEILSELYTDWMSLLY
CEEHHHHHCCCCHHHHHHHHCCCCCCEEEECCEEEEEEECCCHHHHHHHHHHHHHHHHHH
YHHKIIWAYGQGSVLINKAKKMFAKVYSITGSIEEKVTEGNGKVNRLEEIGSILRKVQVI
HHHHEEEEECCCCCHHHHHHHHHHHHHHHHCHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
MNQYTNNMNNLQFQKVTIQINLSNYEKRLKTISKNATEKVPGSRTNIDFLDDFSKLVKDK
HHHHHCCCCCEEEEEEEEEEECHHHHHHHHHHHCCCHHCCCCCCCCCHHHHHHHHHHHHH
YLWQIKEYLESFELGLRLLENNINAIRSQTEIERAKVDRDFKGLISVVATGVAIAGLTGD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHEECCCC
NAATECKSIFNDRFFLCQNTFVYNITLVFFVSLLIWLLRKYILKRS
CHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MLNIINPTIDLFLYDLRNSLSDNEKSIGEKREYFYQKFDETVQERLKEDGKDLDQRQKQE
CCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
VGYIQLLKDIYAPLDPDTPIENGYYYPVRLGDSYGLLLEVAEVNGSQEKTPEYFAELKER
HHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCCEEEEEECCCCCCCCCHHHHHHHHHH
IQRKLGDNKATLGQTWMLSTYLPNFSEITSAEIEQIAQESYKAIFPNTKEEVKFHKKGEF
HHHHHCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCC
IGATIFEYSDKGFKEEVVKLGEKENSIFVQNKHVIVAIYPDKESFEILSELYTDWMSLLY
CEEHHHHHCCCCHHHHHHHHCCCCCCEEEECCEEEEEEECCCHHHHHHHHHHHHHHHHHH
YHHKIIWAYGQGSVLINKAKKMFAKVYSITGSIEEKVTEGNGKVNRLEEIGSILRKVQVI
HHHHEEEEECCCCCHHHHHHHHHHHHHHHHCHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
MNQYTNNMNNLQFQKVTIQINLSNYEKRLKTISKNATEKVPGSRTNIDFLDDFSKLVKDK
HHHHHCCCCCEEEEEEEEEEECHHHHHHHHHHHCCCHHCCCCCCCCCHHHHHHHHHHHHH
YLWQIKEYLESFELGLRLLENNINAIRSQTEIERAKVDRDFKGLISVVATGVAIAGLTGD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHEECCCC
NAATECKSIFNDRFFLCQNTFVYNITLVFFVSLLIWLLRKYILKRS
CHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA