Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113476090

Identifier: 113476090

GI number: 113476090

Start: 3796221

End: 3796706

Strand: Direct

Name: 113476090

Synonym: Tery_2468

Alternate gene names: NA

Gene position: 3796221-3796706 (Clockwise)

Preceding gene: 113476085

Following gene: 113476091

Centisome position: 48.98

GC content: 32.51

Gene sequence:

>486_bases
ATGAATTATTCAAAGGATAAGTTCTTATTATCTACGTTATTAGCTATCGGAGAGTTAGAGAATTCTTTAGGTTCTGAGGC
TAAAGATGCTCTCTATGTTATTGCTGAACAACTATTTGTTAAACCTACTGCTTGGGAAACAGATATTGAGTCTAATTTAA
TGGGAATAATTAATGAAAATTCGTCTTTAAGTACAATCTTTCAGGACTTTAAATCTAAGTTAGATGAGGTTGATAATATT
TATGATTTTATTCCCACTCAAGAAGAATTAGAAGCAGTTATTCCGGCGGCTGCTCTGAAACATACCCGTCCTATTATTAA
GCCTAATTCTTCTGATCTAACAAGTGAAGAAGAAATTACTAATATGTCTATGCAGGTTTTATCATCGCCAGAGCCATCAG
AAATAGCAAAAGAAATAGTAAAAAAATCTAGCAAGTTGGAGCGGCTATTAAATTTGATTCGTCCAAATAGGTCGAAGAAT
AAATAA

Upstream 100 bases:

>100_bases
GATATAGATATGTTAAAGTTCACAGAGGAAATTAATAAGTTCAATAACTAAAATTATCTGAAAATAAAAAAAAATAAGTT
ATAAATAAAGGAGAATTTAG

Downstream 100 bases:

>100_bases
TTTCTAATTATTATGGAAAGCAGAAGGTTCTCAGCAGGGGGTAAGAGTGTTAGAATGATTTGGAAAAACTAGCTTTTTAT
GGATATGATTTGGTTTAGTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 161; Mature: 161

Protein sequence:

>161_residues
MNYSKDKFLLSTLLAIGELENSLGSEAKDALYVIAEQLFVKPTAWETDIESNLMGIINENSSLSTIFQDFKSKLDEVDNI
YDFIPTQEELEAVIPAAALKHTRPIIKPNSSDLTSEEEITNMSMQVLSSPEPSEIAKEIVKKSSKLERLLNLIRPNRSKN
K

Sequences:

>Translated_161_residues
MNYSKDKFLLSTLLAIGELENSLGSEAKDALYVIAEQLFVKPTAWETDIESNLMGIINENSSLSTIFQDFKSKLDEVDNI
YDFIPTQEELEAVIPAAALKHTRPIIKPNSSDLTSEEEITNMSMQVLSSPEPSEIAKEIVKKSSKLERLLNLIRPNRSKN
K
>Mature_161_residues
MNYSKDKFLLSTLLAIGELENSLGSEAKDALYVIAEQLFVKPTAWETDIESNLMGIINENSSLSTIFQDFKSKLDEVDNI
YDFIPTQEELEAVIPAAALKHTRPIIKPNSSDLTSEEEITNMSMQVLSSPEPSEIAKEIVKKSSKLERLLNLIRPNRSKN
K

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18088; Mature: 18088

Theoretical pI: Translated: 4.49; Mature: 4.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNYSKDKFLLSTLLAIGELENSLGSEAKDALYVIAEQLFVKPTAWETDIESNLMGIINEN
CCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCC
SSLSTIFQDFKSKLDEVDNIYDFIPTQEELEAVIPAAALKHTRPIIKPNSSDLTSEEEIT
CHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHH
NMSMQVLSSPEPSEIAKEIVKKSSKLERLLNLIRPNRSKNK
HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MNYSKDKFLLSTLLAIGELENSLGSEAKDALYVIAEQLFVKPTAWETDIESNLMGIINEN
CCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCC
SSLSTIFQDFKSKLDEVDNIYDFIPTQEELEAVIPAAALKHTRPIIKPNSSDLTSEEEIT
CHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHH
NMSMQVLSSPEPSEIAKEIVKKSSKLERLLNLIRPNRSKNK
HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA