| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is nadB [H]
Identifier: 113476078
GI number: 113476078
Start: 3779129
End: 3779332
Strand: Direct
Name: nadB [H]
Synonym: Tery_2454
Alternate gene names: 113476078
Gene position: 3779129-3779332 (Clockwise)
Preceding gene: 113476077
Following gene: 113476079
Centisome position: 48.76
GC content: 43.63
Gene sequence:
>204_bases ATGACTAATAATATGGAGAATGCTGCCAAGGCGATCGCTCATCTAGTAGAAATGGGAGTTGCCTTCGACCGCAAAGGAAA AAAACTGGCAATGACTCTCGAAGCTGCTCACTCTCATCCCCGGGTACTTCATTCAGCAGATACCACAGGTAGAGCTATTA TTGATACACTCGTTATTGAAGCTCAAGAACGTCCAAATATTTAG
Upstream 100 bases:
>100_bases CTTATTCTGATATAGCGCATATTCTTAGTGAAGTTGGCTTGATTCTATTTCCTGGTTTTTCTAGATAGTGTCTTTGCGTA AGTCCTGTTATTGAAAGTCA
Downstream 100 bases:
>100_bases ATAATTTCCCAGGCAGTAGCATTAAATTTGTGGTTAGCCACACAAAAGGCTCGGGTTCAAGGTATTAGTCTTCTTCACGA AAGTAAAATCCAATGTTTAA
Product: L-aspartate oxidase
Products: NA
Alternate protein names: LASPO; Quinolinate synthase B [H]
Number of amino acids: Translated: 67; Mature: 66
Protein sequence:
>67_residues MTNNMENAAKAIAHLVEMGVAFDRKGKKLAMTLEAAHSHPRVLHSADTTGRAIIDTLVIEAQERPNI
Sequences:
>Translated_67_residues MTNNMENAAKAIAHLVEMGVAFDRKGKKLAMTLEAAHSHPRVLHSADTTGRAIIDTLVIEAQERPNI >Mature_66_residues TNNMENAAKAIAHLVEMGVAFDRKGKKLAMTLEAAHSHPRVLHSADTTGRAIIDTLVIEAQERPNI
Specific function: Catalyzes the oxidation of L-aspartate to iminoaspartate [H]
COG id: COG0029
COG function: function code H; Aspartate oxidase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the FAD-dependent oxidoreductase 2 family. NadB subfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003953 - InterPro: IPR013027 - InterPro: IPR015939 - InterPro: IPR004112 - InterPro: IPR005288 [H]
Pfam domain/function: PF00890 FAD_binding_2; PF02910 Succ_DH_flav_C [H]
EC number: =1.4.3.16 [H]
Molecular weight: Translated: 7307; Mature: 7175
Theoretical pI: Translated: 7.87; Mature: 7.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 6.0 %Met (Translated Protein) 6.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.5 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTNNMENAAKAIAHLVEMGVAFDRKGKKLAMTLEAAHSHPRVLHSADTTGRAIIDTLVIE CCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCEEECCCCCCHHHHHHHHHH AQERPNI CCCCCCC >Mature Secondary Structure TNNMENAAKAIAHLVEMGVAFDRKGKKLAMTLEAAHSHPRVLHSADTTGRAIIDTLVIE CCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCEEECCCCCCHHHHHHHHHH AQERPNI CCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8905231 [H]