Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113476008

Identifier: 113476008

GI number: 113476008

Start: 3668880

End: 3669755

Strand: Direct

Name: 113476008

Synonym: Tery_2376

Alternate gene names: NA

Gene position: 3668880-3669755 (Clockwise)

Preceding gene: 113476007

Following gene: 113476009

Centisome position: 47.34

GC content: 32.53

Gene sequence:

>876_bases
ATGATCGTGACAAATAACGTATATGACAATGATTATTATTATGAACGAGTTGTGGAGGAAGTATATCCACACTTAGAAAA
GCAAGAACGAGGTTTACTATATAGAGCAATTCAGATAATACATGGAGAAGAAAAATCACAAACCCCAAAAAATACTCAAG
ACATATGTAAAAGTCTAGATATAAATGCCAATGCTGATAAAAAAGATGACGTCAAAAAAGCTAAGCAGTTTTTAATAGGA
AGGCTAGAAAAATATTATCTAGATAATAAGGATCAAAATATTTTACAAAAGATAGGTAATGTTTGGGAATACAGAGAAAA
AACAACATCAAAAAAAATACAAGCAGGAGATGATAAAATGATAGAAATTAGGTTGATTATTATAGGGGCTTGTACATTAG
TTGGATTTCTTGCTTGTCGGGATTATCTTGATAAAGAACGAAAAAAATCAGAAAGAAAGAAAGTTATTTCTCAAGAAAGA
AAAGAGCAGCCTTCTCCTCCTCCAATTCCCGCTTCGTTGTGTCTTGTTGTTCCAGCGAGGATAGCCAGCACTCTAGAAAC
CAACTCTAGTTTATTAAGTGTTAATAGTGTAAAATACCTCATAGACAATACTGCATACTTCTTATGTACAACATGTAAAG
TAGCTGATTCAAATGAGCAAGAATACTTAAAAATCGCCAAAGAAAAAGAGATTTTACCTAATAGTCAACGAGACGTTTAT
ATCAGGATTGATATCAATTCTGGAGGCAAAAATCTTATTGATAAAAAGAACCGTTTGGCGTTGAAGAACAATCTACCAGA
GAATGCAGAGTTTGCTTTAAAAGAAGTGGCTCGTCTCAAAGATTTATCTGGCCTAGAAAAATTTATTCGTATTTAG

Upstream 100 bases:

>100_bases
TGAAAAAGAAAAAAATATCTGGGAACCTATGGGAAAGAAGGCTCAACAACTCACGGATGAATTTTCTAGCTTGGCAAAAA
TCTTAAGCAAAGGGTCTTAA

Downstream 100 bases:

>100_bases
GGCGTAAAAATGAATGATCAAGCTGCTTATTTATATTATGCAGTTTGTATTTTTCCCCTAATTTATCTCAATTACACACT
CTAAAAGTTAAGTTTTTTCT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 291; Mature: 291

Protein sequence:

>291_residues
MIVTNNVYDNDYYYERVVEEVYPHLEKQERGLLYRAIQIIHGEEKSQTPKNTQDICKSLDINANADKKDDVKKAKQFLIG
RLEKYYLDNKDQNILQKIGNVWEYREKTTSKKIQAGDDKMIEIRLIIIGACTLVGFLACRDYLDKERKKSERKKVISQER
KEQPSPPPIPASLCLVVPARIASTLETNSSLLSVNSVKYLIDNTAYFLCTTCKVADSNEQEYLKIAKEKEILPNSQRDVY
IRIDINSGGKNLIDKKNRLALKNNLPENAEFALKEVARLKDLSGLEKFIRI

Sequences:

>Translated_291_residues
MIVTNNVYDNDYYYERVVEEVYPHLEKQERGLLYRAIQIIHGEEKSQTPKNTQDICKSLDINANADKKDDVKKAKQFLIG
RLEKYYLDNKDQNILQKIGNVWEYREKTTSKKIQAGDDKMIEIRLIIIGACTLVGFLACRDYLDKERKKSERKKVISQER
KEQPSPPPIPASLCLVVPARIASTLETNSSLLSVNSVKYLIDNTAYFLCTTCKVADSNEQEYLKIAKEKEILPNSQRDVY
IRIDINSGGKNLIDKKNRLALKNNLPENAEFALKEVARLKDLSGLEKFIRI
>Mature_291_residues
MIVTNNVYDNDYYYERVVEEVYPHLEKQERGLLYRAIQIIHGEEKSQTPKNTQDICKSLDINANADKKDDVKKAKQFLIG
RLEKYYLDNKDQNILQKIGNVWEYREKTTSKKIQAGDDKMIEIRLIIIGACTLVGFLACRDYLDKERKKSERKKVISQER
KEQPSPPPIPASLCLVVPARIASTLETNSSLLSVNSVKYLIDNTAYFLCTTCKVADSNEQEYLKIAKEKEILPNSQRDVY
IRIDINSGGKNLIDKKNRLALKNNLPENAEFALKEVARLKDLSGLEKFIRI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33521; Mature: 33521

Theoretical pI: Translated: 9.03; Mature: 9.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIVTNNVYDNDYYYERVVEEVYPHLEKQERGLLYRAIQIIHGEEKSQTPKNTQDICKSLD
CEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCC
INANADKKDDVKKAKQFLIGRLEKYYLDNKDQNILQKIGNVWEYREKTTSKKIQAGDDKM
CCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCE
IEIRLIIIGACTLVGFLACRDYLDKERKKSERKKVISQERKEQPSPPPIPASLCLVVPAR
EEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHH
IASTLETNSSLLSVNSVKYLIDNTAYFLCTTCKVADSNEQEYLKIAKEKEILPNSQRDVY
HHHHHHCCCCEEEHHHHHHHHHCCEEEEEEEEEECCCCHHHHHHHHHHHHCCCCCCCCEE
IRIDINSGGKNLIDKKNRLALKNNLPENAEFALKEVARLKDLSGLEKFIRI
EEEEECCCCCHHHCCHHCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MIVTNNVYDNDYYYERVVEEVYPHLEKQERGLLYRAIQIIHGEEKSQTPKNTQDICKSLD
CEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCC
INANADKKDDVKKAKQFLIGRLEKYYLDNKDQNILQKIGNVWEYREKTTSKKIQAGDDKM
CCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCE
IEIRLIIIGACTLVGFLACRDYLDKERKKSERKKVISQERKEQPSPPPIPASLCLVVPAR
EEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHH
IASTLETNSSLLSVNSVKYLIDNTAYFLCTTCKVADSNEQEYLKIAKEKEILPNSQRDVY
HHHHHHCCCCEEEHHHHHHHHHCCEEEEEEEEEECCCCHHHHHHHHHHHHCCCCCCCCEE
IRIDINSGGKNLIDKKNRLALKNNLPENAEFALKEVARLKDLSGLEKFIRI
EEEEECCCCCHHHCCHHCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA