Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113476007

Identifier: 113476007

GI number: 113476007

Start: 3666894

End: 3668879

Strand: Direct

Name: 113476007

Synonym: Tery_2375

Alternate gene names: NA

Gene position: 3666894-3668879 (Clockwise)

Preceding gene: 113476006

Following gene: 113476008

Centisome position: 47.31

GC content: 37.01

Gene sequence:

>1986_bases
ATGATAAATTACATTGATCAAAGAGAGGAAAACCCAAACTTAGCTTGTCCACAGTCTGCAATTAGCTACCCCTTCAAATT
TTTAAAACGATCTGATCTGGAACTTCCTAGAGGCACTAAGGTACGGATAATGGATCTGCCTGGTTTAGCTTATGTAGGTG
ATGAAGGAAATACCAGTGTCATTCGACAGTGCCGTGAAGCTTTATGTCTCGTCACATACAACAGTGCGGAAACAGATAAA
CAAAAAGTTAGGAGTTTATTACAGGAAGTCGTTACACAAGTTAAAGACTTAGGAGGTTCTCCGGCACGGATGCTTTTCGT
TCTAAATAAAATTGATGTTTTCAGGGCCGATAACAATTGGGAGAGATCAGAAAAACGTTTCATTGACAAGACTATCAAGA
GCATAAAAACTGAGTTGAGTGACCGACTGAAAGAATATACAGAAGAAATTGAGAATTTACAGGTTGTCAAACTTAGCACA
TTGCCTGCTCTTCTGGCTCTTGAGATACAAAATAAAAATAATGACTACATTAAAGCTTGTAAGAAGGTAAAAAAACAGTT
TTATGGAATTGTTGAAGATATATTAGATAATTTGGTGGGCAATGTAGAAAAATGGTCTAAGCCTGAGCGTAACAAAGTTG
CAGAGGAATTGTGGCAAAAGTCTTATGCAGGTGTTTTTTTTTACAACTTGAAGAATCATATCACTGAACATTTTCCGCAA
CTGGTGATACCACAAGCAATAGAACGTTTTAATGTTGCTGCGGGAAACGCTGTAGTAGAGTGGGCAAAACAAACAACAAC
GGCTATTCTTAATAGTTCAGAGGATCGTTATCAACAAGAGTGTAAAGAGATAGAACGCATTAGAAAATCCATTGAACATT
TCCTTGACATTCATTCAAGCAACTTAAGAGAACCTTTCGAAGAAGTAGGTAAAAAAATTCAACAGGTTTTCAAACAACAG
TCTGAAGATGATCCTGTTGTGTATTTAGAAAACACAGTCATAAAACTTATGGATGCTAAACCCTATGACTCCCTGGGAGA
AAAGTTATTCCCACTCTTTGGATGGCGCAGAGAACTGGCACAAGGAATCTCCAAAGTTTTGGAAGCAGTTGGAGAGTCTT
TGGAAACAGGAAAAGTAGATATAGAGAGTACAGAACTCAAAAAAGCCAATTACAATTATGTAAATTTACTGGAAGCAAAC
TTAAAGAGACTTGTGGGTTTAGGCTATACCGCTTCTGTCGCCAAAGAAGGTAAAAATATGGAGGCAAAAACTAAGAGTGA
AAAAGAGGAACTTGGACAATTGAACACAGAATTAAATTTATTAGCTACTCATTTGAATCTTGTGCTTGAGGATGTAGCAA
ACCAGATTTCACACCAAGAATTAAACAGGATTTATCAAGCGGTTGTAGAGCTTTTTAGTTGTCACTTGTCTTATATTGAA
AAAGGTTCAAATGATATCGCACCAAATATGGCTATTAAGTTTCCAGATTCTCAAATTAGTAGGGTGACAGCTGATCGACC
GCTTAAATTTACCTTTAAGTTTAAAGCAGGATTTCCTATTACAGAAGGAACTTGGGAAGAGCGTGTACAAACAAAGGTTC
AGAAAAGGGTTTGGTGGAAGTTATGGTTGGGGACATCAACGTTTTATGAAATCGAGTATCGAAAACGCTCTAGCGATAAT
GCTGAGATACCTAGCGTGGAAAATTTGCTAGATGGTTGGCTAATTCAATCTCAACAAGCAGAAGGAGAAATTGTTAAGCA
AATAGCACATTGGTTACTAGAACAAATTGAAAGTCTTAATAAAAAGGTAAGCGAGGTTCAAAGCGGTATTATTAATGCTT
ATCAGTCAAGGCTCGATCAAGCTCGCAAAGAAGTCACTATAGATTATGAAAAAGAAAAAAATATCTGGGAACCTATGGGA
AAGAAGGCTCAACAACTCACGGATGAATTTTCTAGCTTGGCAAAAATCTTAAGCAAAGGGTCTTAA

Upstream 100 bases:

>100_bases
AATATCTTTAGTAATTGATGAAACACCTGAAGCTACCTGGGAGTGTGGAGAATGACAAGGTATTAGTGAAGAAGAAATTT
ATCAACGCTTAGAAGAGGTA

Downstream 100 bases:

>100_bases
ATGATCGTGACAAATAACGTATATGACAATGATTATTATTATGAACGAGTTGTGGAGGAAGTATATCCACACTTAGAAAA
GCAAGAACGAGGTTTACTAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 661; Mature: 661

Protein sequence:

>661_residues
MINYIDQREENPNLACPQSAISYPFKFLKRSDLELPRGTKVRIMDLPGLAYVGDEGNTSVIRQCREALCLVTYNSAETDK
QKVRSLLQEVVTQVKDLGGSPARMLFVLNKIDVFRADNNWERSEKRFIDKTIKSIKTELSDRLKEYTEEIENLQVVKLST
LPALLALEIQNKNNDYIKACKKVKKQFYGIVEDILDNLVGNVEKWSKPERNKVAEELWQKSYAGVFFYNLKNHITEHFPQ
LVIPQAIERFNVAAGNAVVEWAKQTTTAILNSSEDRYQQECKEIERIRKSIEHFLDIHSSNLREPFEEVGKKIQQVFKQQ
SEDDPVVYLENTVIKLMDAKPYDSLGEKLFPLFGWRRELAQGISKVLEAVGESLETGKVDIESTELKKANYNYVNLLEAN
LKRLVGLGYTASVAKEGKNMEAKTKSEKEELGQLNTELNLLATHLNLVLEDVANQISHQELNRIYQAVVELFSCHLSYIE
KGSNDIAPNMAIKFPDSQISRVTADRPLKFTFKFKAGFPITEGTWEERVQTKVQKRVWWKLWLGTSTFYEIEYRKRSSDN
AEIPSVENLLDGWLIQSQQAEGEIVKQIAHWLLEQIESLNKKVSEVQSGIINAYQSRLDQARKEVTIDYEKEKNIWEPMG
KKAQQLTDEFSSLAKILSKGS

Sequences:

>Translated_661_residues
MINYIDQREENPNLACPQSAISYPFKFLKRSDLELPRGTKVRIMDLPGLAYVGDEGNTSVIRQCREALCLVTYNSAETDK
QKVRSLLQEVVTQVKDLGGSPARMLFVLNKIDVFRADNNWERSEKRFIDKTIKSIKTELSDRLKEYTEEIENLQVVKLST
LPALLALEIQNKNNDYIKACKKVKKQFYGIVEDILDNLVGNVEKWSKPERNKVAEELWQKSYAGVFFYNLKNHITEHFPQ
LVIPQAIERFNVAAGNAVVEWAKQTTTAILNSSEDRYQQECKEIERIRKSIEHFLDIHSSNLREPFEEVGKKIQQVFKQQ
SEDDPVVYLENTVIKLMDAKPYDSLGEKLFPLFGWRRELAQGISKVLEAVGESLETGKVDIESTELKKANYNYVNLLEAN
LKRLVGLGYTASVAKEGKNMEAKTKSEKEELGQLNTELNLLATHLNLVLEDVANQISHQELNRIYQAVVELFSCHLSYIE
KGSNDIAPNMAIKFPDSQISRVTADRPLKFTFKFKAGFPITEGTWEERVQTKVQKRVWWKLWLGTSTFYEIEYRKRSSDN
AEIPSVENLLDGWLIQSQQAEGEIVKQIAHWLLEQIESLNKKVSEVQSGIINAYQSRLDQARKEVTIDYEKEKNIWEPMG
KKAQQLTDEFSSLAKILSKGS
>Mature_661_residues
MINYIDQREENPNLACPQSAISYPFKFLKRSDLELPRGTKVRIMDLPGLAYVGDEGNTSVIRQCREALCLVTYNSAETDK
QKVRSLLQEVVTQVKDLGGSPARMLFVLNKIDVFRADNNWERSEKRFIDKTIKSIKTELSDRLKEYTEEIENLQVVKLST
LPALLALEIQNKNNDYIKACKKVKKQFYGIVEDILDNLVGNVEKWSKPERNKVAEELWQKSYAGVFFYNLKNHITEHFPQ
LVIPQAIERFNVAAGNAVVEWAKQTTTAILNSSEDRYQQECKEIERIRKSIEHFLDIHSSNLREPFEEVGKKIQQVFKQQ
SEDDPVVYLENTVIKLMDAKPYDSLGEKLFPLFGWRRELAQGISKVLEAVGESLETGKVDIESTELKKANYNYVNLLEAN
LKRLVGLGYTASVAKEGKNMEAKTKSEKEELGQLNTELNLLATHLNLVLEDVANQISHQELNRIYQAVVELFSCHLSYIE
KGSNDIAPNMAIKFPDSQISRVTADRPLKFTFKFKAGFPITEGTWEERVQTKVQKRVWWKLWLGTSTFYEIEYRKRSSDN
AEIPSVENLLDGWLIQSQQAEGEIVKQIAHWLLEQIESLNKKVSEVQSGIINAYQSRLDQARKEVTIDYEKEKNIWEPMG
KKAQQLTDEFSSLAKILSKGS

Specific function: Unknown

COG id: COG0699

COG function: function code R; Predicted GTPases (dynamin-related)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 75964; Mature: 75964

Theoretical pI: Translated: 6.37; Mature: 6.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MINYIDQREENPNLACPQSAISYPFKFLKRSDLELPRGTKVRIMDLPGLAYVGDEGNTSV
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCEEEECCCCCHHH
IRQCREALCLVTYNSAETDKQKVRSLLQEVVTQVKDLGGSPARMLFVLNKIDVFRADNNW
HHHHHHHHEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHEEECCCCC
ERSEKRFIDKTIKSIKTELSDRLKEYTEEIENLQVVKLSTLPALLALEIQNKNNDYIKAC
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEHHCCHHHEEEECCCCCHHHHHH
KKVKKQFYGIVEDILDNLVGNVEKWSKPERNKVAEELWQKSYAGVFFYNLKNHITEHFPQ
HHHHHHHHHHHHHHHHHHHCCHHHCCCCHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHH
LVIPQAIERFNVAAGNAVVEWAKQTTTAILNSSEDRYQQECKEIERIRKSIEHFLDIHSS
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
NLREPFEEVGKKIQQVFKQQSEDDPVVYLENTVIKLMDAKPYDSLGEKLFPLFGWRRELA
HHHHHHHHHHHHHHHHHHHCCCCCCEEEECCHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
QGISKVLEAVGESLETGKVDIESTELKKANYNYVNLLEANLKRLVGLGYTASVAKEGKNM
HHHHHHHHHHCCCHHCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHCCCCC
EAKTKSEKEELGQLNTELNLLATHLNLVLEDVANQISHQELNRIYQAVVELFSCHLSYIE
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KGSNDIAPNMAIKFPDSQISRVTADRPLKFTFKFKAGFPITEGTWEERVQTKVQKRVWWK
CCCCCCCCCCEEECCCHHHHHHHCCCCEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHH
LWLGTSTFYEIEYRKRSSDNAEIPSVENLLDGWLIQSQQAEGEIVKQIAHWLLEQIESLN
HEECCCEEEEEEEHHCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
KKVSEVQSGIINAYQSRLDQARKEVTIDYEKEKNIWEPMGKKAQQLTDEFSSLAKILSKG
HHHHHHHHHHHHHHHHHHHHHHHHEECCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCC
S
C
>Mature Secondary Structure
MINYIDQREENPNLACPQSAISYPFKFLKRSDLELPRGTKVRIMDLPGLAYVGDEGNTSV
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCEEEECCCCCHHH
IRQCREALCLVTYNSAETDKQKVRSLLQEVVTQVKDLGGSPARMLFVLNKIDVFRADNNW
HHHHHHHHEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHEEECCCCC
ERSEKRFIDKTIKSIKTELSDRLKEYTEEIENLQVVKLSTLPALLALEIQNKNNDYIKAC
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEHHCCHHHEEEECCCCCHHHHHH
KKVKKQFYGIVEDILDNLVGNVEKWSKPERNKVAEELWQKSYAGVFFYNLKNHITEHFPQ
HHHHHHHHHHHHHHHHHHHCCHHHCCCCHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHH
LVIPQAIERFNVAAGNAVVEWAKQTTTAILNSSEDRYQQECKEIERIRKSIEHFLDIHSS
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
NLREPFEEVGKKIQQVFKQQSEDDPVVYLENTVIKLMDAKPYDSLGEKLFPLFGWRRELA
HHHHHHHHHHHHHHHHHHHCCCCCCEEEECCHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
QGISKVLEAVGESLETGKVDIESTELKKANYNYVNLLEANLKRLVGLGYTASVAKEGKNM
HHHHHHHHHHCCCHHCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHCCCCC
EAKTKSEKEELGQLNTELNLLATHLNLVLEDVANQISHQELNRIYQAVVELFSCHLSYIE
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KGSNDIAPNMAIKFPDSQISRVTADRPLKFTFKFKAGFPITEGTWEERVQTKVQKRVWWK
CCCCCCCCCCEEECCCHHHHHHHCCCCEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHH
LWLGTSTFYEIEYRKRSSDNAEIPSVENLLDGWLIQSQQAEGEIVKQIAHWLLEQIESLN
HEECCCEEEEEEEHHCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
KKVSEVQSGIINAYQSRLDQARKEVTIDYEKEKNIWEPMGKKAQQLTDEFSSLAKILSKG
HHHHHHHHHHHHHHHHHHHHHHHHEECCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCC
S
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA