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The map label for this gene is ydhJ [C]

Identifier: 113476009

GI number: 113476009

Start: 3670590

End: 3672419

Strand: Direct

Name: ydhJ [C]

Synonym: Tery_2377

Alternate gene names: 113476009

Gene position: 3670590-3672419 (Clockwise)

Preceding gene: 113476008

Following gene: 113476010

Centisome position: 47.36

GC content: 39.18

Gene sequence:

>1830_bases
ATGGCTATAAATTATCGAACTGGAAAAGTCATTACTTCAGAAAATAGAGGGAAATGGCAAGGACTAATTATTGGTATTGG
CATTGGTGTAATTGCTAGTTTAGTGAGTATGCAAGTTTCTAGACAAAAGCAAAAGACTGAAGCTAATACCACTTCTACCC
AAGCCATTAAAGGTGCAATAGAGACTAATTTGGCCCCCACTATGAGCGTGACAGTGGCAAGAGTAGAATTAGCAAGGGTA
GAACGCACCCTTAATGCTACAGGTAGCGTTGTTGCCTTCGATCTATTACCAGTGTTACCCCAGGTGAGTGGGTTACAAAT
TCAACAAGTCTTGGTAGAGGAAGGGGAAACAGTTACTCAAGGTCAGGTAATGGCAATTTTAGATGACTCCGTTTTGAAAT
CGAAAATTAACCAAGCTAAATCTCAAGTAGCATCAGCTCGCAGTCAAGTAGAGCAAAGAAGGGCTGTTCACAGTAAGACG
AAAGTAGGTGTGGAGCAAGCTATTGCTGCTTGGGAACAAGCAAGAGCAGAACGTGATGGTGTCAAAGCTACTATTACTCA
GGCTCAAGCAGGTAAAGATGAGGCGATCGCTGCTCTCAAACAAGCTCAAGCAAGTCGGGATGATGCTTTTGCCGCTCTCA
AACAAACTCAAGCAAGTCGGGATGATGCTTTTGCCGCTCTTAGACAAACCCAAGCAAGTCGGGATGACACCCTGGCGTTT
GTAGCGCAAACTGAAGCTAGGTTATCAGAAGCTCAAGCTAACGAAGAACAAACCCTGAGAGATTTTGAGCGATATCAAAC
TCTGAGAGGGGAGGGTGTTATTAGTTCTCAAGAATTAGAAACTCGTAGCACGGCTACGAAAACAGCTAGGGAAGGGGTTC
GAGTTGCTAAAGCTAATATTAATAGTGCTCAAGCTAAGGTTGACATTGCTGAAGCGAATATTGATAGTGCTCAAGCTAAG
GTTGACATTGCTGAAGCGAATATTGATAGTGCTCAAGCTAAGGTTGACATTGCTGGATCAAATGTTAGGAGTGCAGAAGC
TAGGGTAGAAAGTGCACAAGCAAGTCTCAGTAGTACAATAGCTCAACTACGGAGTGCAGAGGCTAAAGTTAATAGTGCTA
AAGCTAATATTAGTAGCGCTCAAGCAGAAGTTAATAGTGCATTATCCAATATTAATAGTGCTATGTCAAGTGTTAGCAGT
GACGAAGCTCGCCTAGAAGAAAAACAAACTCAGCTCTCACAGACTTTAGTGAAAGCTCCAGCAAATGGTATATTAGCAGA
ACGGATAGCTCGTGTTGGTGATGTGAGTTCTAGTAGTAAAAAATTATTTTCAATTATTAAAGATAATCAATTAGAATTAC
AATTAGAAGTACCAGAAACTCAGTTACCACAAGTTAAAATTGGCACAAAAGTTAATATTAGTTCTGATGCTGATAGTAGG
ATAAAAATTTCAGGAATAGTGAGACAAATAGCACCATTAGTTAATGAACAAACTCGCGAAGCTACTGTCAAAATAGACCT
ACCTAATAGTGATTTATTACGACCAGGAATGTTTTTGCGGGCAAAAATTACAACTGCTACAAATCAAGGATTAAAAATTC
CAGCAAAAGCAGTATTACCTCAAACAGATGGGCAGTCTATTGTTTATGTTTTGCAAAGTAATAATAAAGTTAAAGCTATG
CCTGTAGAAGTAGGAAAAATTTTAGGTAAAAATAGTGATTTAGCTAATGCTGAAATTGAAGTAAAAAAGGGTTTAGATTT
AGGTAATAAAGTAGTATTAGCAGGTGCAGGTTATTTGAAAGATGGAGATATAGTTAAAGTTATTGAGTAA

Upstream 100 bases:

>100_bases
TTTTTAATAATTTTTAATTATCAGGGGTAAAATGTGAGAGGGTAAATATAATCATAGAAAATTATATTAAAAAATAAAAA
CTAAAAACTAATTTTATTTT

Downstream 100 bases:

>100_bases
AATTAACCTCTAATAATTGTGAAATAAAAATATCGTCATAATTCCAATAGTTGCATAGTAATCAATACTCAATTAACTCC
GTTCATGATTTAGATATCAA

Product: RND family efflux transporter MFP subunit

Products: NA

Alternate protein names: RND Family Efflux Transporter MFP Subunit; HlyD Family Secretion Protein; Secretion Protein HlyD; RND Efflux Membrane Fusion Protein; Efflux Cation Transporter Protein; Membrane-Fusion Protein; Membrane Fusion Protein; Secretion Protein; Efflux Transporter Rnd Family Mfp Subunit; Secretion Protein Hlyd; HAE1 Family Efflux Transporter MFP Subunit; Protein Secretion Protein; Cation Efflux System Protein; Cation-Efflux System Protein; Efflux Protein; Metal Transporter-Like Exported Protein; Transporter Lipoprotein Transmembrane; Heavy Metal Efflux Pump; Efflux Transporter MFP Component RND Family; Multidrug Resistance Efflux Pump Periplasmic Component; DevB Family ABC Exporter Membrane Fusion Protein; Component Of Multidrug Efflux System; HlyD Family Protein Secretion Protein; Nickel And Cobalt Resistance Protein CNRB; Multidrug ABC Transporter; HlyD/ACR Family Transporter Component; HlyD-Family Secretion Protein; HlyD Family-Like Protein; Multidrug Efflux Protein; HlyD-Like Secretion Protein; Cation-Efflux System Signal Peptide Protein; Secretion Protein HlyD-Like Protein; Hlyd Family Secretion Protein; RND-Type Efflux Transporter Membrane-Fusion Protein; Membrane Efflux Protein; Secretion Protein HlyD Family; Secretion HlyD Protein; ABC Exporter Membrane Fusion Protein DevB Family; RND Family Efflux Transporter; Efflux System

Number of amino acids: Translated: 609; Mature: 608

Protein sequence:

>609_residues
MAINYRTGKVITSENRGKWQGLIIGIGIGVIASLVSMQVSRQKQKTEANTTSTQAIKGAIETNLAPTMSVTVARVELARV
ERTLNATGSVVAFDLLPVLPQVSGLQIQQVLVEEGETVTQGQVMAILDDSVLKSKINQAKSQVASARSQVEQRRAVHSKT
KVGVEQAIAAWEQARAERDGVKATITQAQAGKDEAIAALKQAQASRDDAFAALKQTQASRDDAFAALRQTQASRDDTLAF
VAQTEARLSEAQANEEQTLRDFERYQTLRGEGVISSQELETRSTATKTAREGVRVAKANINSAQAKVDIAEANIDSAQAK
VDIAEANIDSAQAKVDIAGSNVRSAEARVESAQASLSSTIAQLRSAEAKVNSAKANISSAQAEVNSALSNINSAMSSVSS
DEARLEEKQTQLSQTLVKAPANGILAERIARVGDVSSSSKKLFSIIKDNQLELQLEVPETQLPQVKIGTKVNISSDADSR
IKISGIVRQIAPLVNEQTREATVKIDLPNSDLLRPGMFLRAKITTATNQGLKIPAKAVLPQTDGQSIVYVLQSNNKVKAM
PVEVGKILGKNSDLANAEIEVKKGLDLGNKVVLAGAGYLKDGDIVKVIE

Sequences:

>Translated_609_residues
MAINYRTGKVITSENRGKWQGLIIGIGIGVIASLVSMQVSRQKQKTEANTTSTQAIKGAIETNLAPTMSVTVARVELARV
ERTLNATGSVVAFDLLPVLPQVSGLQIQQVLVEEGETVTQGQVMAILDDSVLKSKINQAKSQVASARSQVEQRRAVHSKT
KVGVEQAIAAWEQARAERDGVKATITQAQAGKDEAIAALKQAQASRDDAFAALKQTQASRDDAFAALRQTQASRDDTLAF
VAQTEARLSEAQANEEQTLRDFERYQTLRGEGVISSQELETRSTATKTAREGVRVAKANINSAQAKVDIAEANIDSAQAK
VDIAEANIDSAQAKVDIAGSNVRSAEARVESAQASLSSTIAQLRSAEAKVNSAKANISSAQAEVNSALSNINSAMSSVSS
DEARLEEKQTQLSQTLVKAPANGILAERIARVGDVSSSSKKLFSIIKDNQLELQLEVPETQLPQVKIGTKVNISSDADSR
IKISGIVRQIAPLVNEQTREATVKIDLPNSDLLRPGMFLRAKITTATNQGLKIPAKAVLPQTDGQSIVYVLQSNNKVKAM
PVEVGKILGKNSDLANAEIEVKKGLDLGNKVVLAGAGYLKDGDIVKVIE
>Mature_608_residues
AINYRTGKVITSENRGKWQGLIIGIGIGVIASLVSMQVSRQKQKTEANTTSTQAIKGAIETNLAPTMSVTVARVELARVE
RTLNATGSVVAFDLLPVLPQVSGLQIQQVLVEEGETVTQGQVMAILDDSVLKSKINQAKSQVASARSQVEQRRAVHSKTK
VGVEQAIAAWEQARAERDGVKATITQAQAGKDEAIAALKQAQASRDDAFAALKQTQASRDDAFAALRQTQASRDDTLAFV
AQTEARLSEAQANEEQTLRDFERYQTLRGEGVISSQELETRSTATKTAREGVRVAKANINSAQAKVDIAEANIDSAQAKV
DIAEANIDSAQAKVDIAGSNVRSAEARVESAQASLSSTIAQLRSAEAKVNSAKANISSAQAEVNSALSNINSAMSSVSSD
EARLEEKQTQLSQTLVKAPANGILAERIARVGDVSSSSKKLFSIIKDNQLELQLEVPETQLPQVKIGTKVNISSDADSRI
KISGIVRQIAPLVNEQTREATVKIDLPNSDLLRPGMFLRAKITTATNQGLKIPAKAVLPQTDGQSIVYVLQSNNKVKAMP
VEVGKILGKNSDLANAEIEVKKGLDLGNKVVLAGAGYLKDGDIVKVIE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 64929; Mature: 64798

Theoretical pI: Translated: 9.68; Mature: 9.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAINYRTGKVITSENRGKWQGLIIGIGIGVIASLVSMQVSRQKQKTEANTTSTQAIKGAI
CEEEEECCCEEECCCCCCEEEEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
ETNLAPTMSVTVARVELARVERTLNATGSVVAFDLLPVLPQVSGLQIQQVLVEEGETVTQ
HCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCHHHHHHHHHCCCEECC
GQVMAILDDSVLKSKINQAKSQVASARSQVEQRRAVHSKTKVGVEQAIAAWEQARAERDG
CCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
VKATITQAQAGKDEAIAALKQAQASRDDAFAALKQTQASRDDAFAALRQTQASRDDTLAF
CEEEEEHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCEEE
VAQTEARLSEAQANEEQTLRDFERYQTLRGEGVISSQELETRSTATKTAREGVRVAKANI
EEHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCEEEECCC
NSAQAKVDIAEANIDSAQAKVDIAEANIDSAQAKVDIAGSNVRSAEARVESAQASLSSTI
CCCCEEEEEECCCCCCCHHEEEEECCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHH
AQLRSAEAKVNSAKANISSAQAEVNSALSNINSAMSSVSSDEARLEEKQTQLSQTLVKAP
HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCC
ANGILAERIARVGDVSSSSKKLFSIIKDNQLELQLEVPETQLPQVKIGTKVNISSDADSR
CCHHHHHHHHHHCCCCCCHHHHHHHHCCCCEEEEEECCCCCCCEEECCCEEEECCCCCCE
IKISGIVRQIAPLVNEQTREATVKIDLPNSDLLRPGMFLRAKITTATNQGLKIPAKAVLP
EEHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCEEEEEEEECCCCCCCCCHHHCCC
QTDGQSIVYVLQSNNKVKAMPVEVGKILGKNSDLANAEIEVKKGLDLGNKVVLAGAGYLK
CCCCCEEEEEEECCCCEEEEHHHHHHHHCCCCCCCCCEEEEECCCCCCCEEEEECCCCCC
DGDIVKVIE
CCCEEEEEC
>Mature Secondary Structure 
AINYRTGKVITSENRGKWQGLIIGIGIGVIASLVSMQVSRQKQKTEANTTSTQAIKGAI
EEEEECCCEEECCCCCCEEEEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
ETNLAPTMSVTVARVELARVERTLNATGSVVAFDLLPVLPQVSGLQIQQVLVEEGETVTQ
HCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCHHHHHHHHHCCCEECC
GQVMAILDDSVLKSKINQAKSQVASARSQVEQRRAVHSKTKVGVEQAIAAWEQARAERDG
CCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
VKATITQAQAGKDEAIAALKQAQASRDDAFAALKQTQASRDDAFAALRQTQASRDDTLAF
CEEEEEHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCEEE
VAQTEARLSEAQANEEQTLRDFERYQTLRGEGVISSQELETRSTATKTAREGVRVAKANI
EEHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCEEEECCC
NSAQAKVDIAEANIDSAQAKVDIAEANIDSAQAKVDIAGSNVRSAEARVESAQASLSSTI
CCCCEEEEEECCCCCCCHHEEEEECCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHH
AQLRSAEAKVNSAKANISSAQAEVNSALSNINSAMSSVSSDEARLEEKQTQLSQTLVKAP
HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCC
ANGILAERIARVGDVSSSSKKLFSIIKDNQLELQLEVPETQLPQVKIGTKVNISSDADSR
CCHHHHHHHHHHCCCCCCHHHHHHHHCCCCEEEEEECCCCCCCEEECCCEEEECCCCCCE
IKISGIVRQIAPLVNEQTREATVKIDLPNSDLLRPGMFLRAKITTATNQGLKIPAKAVLP
EEHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCEEEEEEEECCCCCCCCCHHHCCC
QTDGQSIVYVLQSNNKVKAMPVEVGKILGKNSDLANAEIEVKKGLDLGNKVVLAGAGYLK
CCCCCEEEEEEECCCCEEEEHHHHHHHHCCCCCCCCCEEEEECCCCCCCEEEEECCCCCC
DGDIVKVIE
CCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA