Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113475973

Identifier: 113475973

GI number: 113475973

Start: 3616506

End: 3617300

Strand: Direct

Name: 113475973

Synonym: Tery_2341

Alternate gene names: NA

Gene position: 3616506-3617300 (Clockwise)

Preceding gene: 113475972

Following gene: 113475979

Centisome position: 46.66

GC content: 38.36

Gene sequence:

>795_bases
ATGAGCGAACATTATCGTCAAGAGTTAGTTCGTGATGGTCAACGTCGTTTTGATGAGTGGCACGGTAAGTTTCTGAAGTA
TCAGAAAAAATATCTGAAGTATCAGAAAAAATATCTGAAGTATCAGAAAGAATTTACCCAGTCAGTTGATAATGAGCATT
ATCGTCAAGAGTTAGTTCGTGATGGTCAACGTCGTTTTGATGAGTGGCACACTGAGTTTCTGAGGTATCAGAAAGAATAT
CTGAAGTATCAGAAAGAATTTATCGAGTCAGTTGATAATGAGCATTATCGTCAAGAGTTAGTTCGTGATGGTCAACGTCG
TTTTGATGAGTGGCACACTGAGTTTTTGAGGTATCAGAAAGAATTTATCGAGTCAGTTGGTAATGAGCATTATCGTCAAG
AGTTAGTTCGTGATGGTCAACGTCGTTTTGATGAGTGGCACACTGAGTTTCTGAGGTATCAGAAAGAATTTATCCAGTCA
CTTGATAATGAACAGAATAAACAAAAGTTAGTTGGTGATCGTGAAACTCGTTATAAAAAGAAAGAGTCACAGGACAAACT
TAGAGTGAAAAAATCTAAGCAACCAGCTAAGAATAAACCTGATCAACAAAAGTTAGGTGCTGCTGGTAAAAATCCTCGTA
AGGAGAAAGAGTTGAACGATAAATTTGGAGGGGAGAAACTTCGGGAGTCAATTGCTGGTGAACATTATCGTCAAATGTTA
GTTCGTGATGGTCAACGTCGTTTTGATGAGTGGCACGAGTCATATCACGGATATATAAAAAAGTTGCGCGGGTAG

Upstream 100 bases:

>100_bases
AATACCAAGGTTCTTTTTCCATTGTGATAATGTAAAAAATACAAAGCTTAAAGTTTTAATATTTTAGTAATTAAAATGTT
TACATAAGAGGTATTAAGTT

Downstream 100 bases:

>100_bases
CAACAAGAGTAACGAGGAAGTTTATACTCTAGCTCCTTCCTATGGAAAATTTACTATAATTAGTTGATAATGAATATTAT
CTCTAAAAGTTAATTCCTGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 264; Mature: 263

Protein sequence:

>264_residues
MSEHYRQELVRDGQRRFDEWHGKFLKYQKKYLKYQKKYLKYQKEFTQSVDNEHYRQELVRDGQRRFDEWHTEFLRYQKEY
LKYQKEFIESVDNEHYRQELVRDGQRRFDEWHTEFLRYQKEFIESVGNEHYRQELVRDGQRRFDEWHTEFLRYQKEFIQS
LDNEQNKQKLVGDRETRYKKKESQDKLRVKKSKQPAKNKPDQQKLGAAGKNPRKEKELNDKFGGEKLRESIAGEHYRQML
VRDGQRRFDEWHESYHGYIKKLRG

Sequences:

>Translated_264_residues
MSEHYRQELVRDGQRRFDEWHGKFLKYQKKYLKYQKKYLKYQKEFTQSVDNEHYRQELVRDGQRRFDEWHTEFLRYQKEY
LKYQKEFIESVDNEHYRQELVRDGQRRFDEWHTEFLRYQKEFIESVGNEHYRQELVRDGQRRFDEWHTEFLRYQKEFIQS
LDNEQNKQKLVGDRETRYKKKESQDKLRVKKSKQPAKNKPDQQKLGAAGKNPRKEKELNDKFGGEKLRESIAGEHYRQML
VRDGQRRFDEWHESYHGYIKKLRG
>Mature_263_residues
SEHYRQELVRDGQRRFDEWHGKFLKYQKKYLKYQKKYLKYQKEFTQSVDNEHYRQELVRDGQRRFDEWHTEFLRYQKEYL
KYQKEFIESVDNEHYRQELVRDGQRRFDEWHTEFLRYQKEFIESVGNEHYRQELVRDGQRRFDEWHTEFLRYQKEFIQSL
DNEQNKQKLVGDRETRYKKKESQDKLRVKKSKQPAKNKPDQQKLGAAGKNPRKEKELNDKFGGEKLRESIAGEHYRQMLV
RDGQRRFDEWHESYHGYIKKLRG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33109; Mature: 32978

Theoretical pI: Translated: 9.97; Mature: 9.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
0.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
0.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEHYRQELVRDGQRRFDEWHGKFLKYQKKYLKYQKKYLKYQKEFTQSVDNEHYRQELVR
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHH
DGQRRFDEWHTEFLRYQKEYLKYQKEFIESVDNEHYRQELVRDGQRRFDEWHTEFLRYQK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
EFIESVGNEHYRQELVRDGQRRFDEWHTEFLRYQKEFIQSLDNEQNKQKLVGDRETRYKK
HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCHHHHHHH
KESQDKLRVKKSKQPAKNKPDQQKLGAAGKNPRKEKELNDKFGGEKLRESIAGEHYRQML
HHHHHHHHHHHHCCCCCCCCCHHHHCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHH
VRDGQRRFDEWHESYHGYIKKLRG
HHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SEHYRQELVRDGQRRFDEWHGKFLKYQKKYLKYQKKYLKYQKEFTQSVDNEHYRQELVR
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHH
DGQRRFDEWHTEFLRYQKEYLKYQKEFIESVDNEHYRQELVRDGQRRFDEWHTEFLRYQK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
EFIESVGNEHYRQELVRDGQRRFDEWHTEFLRYQKEFIQSLDNEQNKQKLVGDRETRYKK
HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCHHHHHHH
KESQDKLRVKKSKQPAKNKPDQQKLGAAGKNPRKEKELNDKFGGEKLRESIAGEHYRQML
HHHHHHHHHHHHCCCCCCCCCHHHHCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHH
VRDGQRRFDEWHESYHGYIKKLRG
HHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA