Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

Click here to switch to the map view.

The map label for this gene is cheA [H]

Identifier: 113475979

GI number: 113475979

Start: 3624340

End: 3625269

Strand: Direct

Name: cheA [H]

Synonym: Tery_2347

Alternate gene names: 113475979

Gene position: 3624340-3625269 (Clockwise)

Preceding gene: 113475973

Following gene: 113475986

Centisome position: 46.77

GC content: 32.26

Gene sequence:

>930_bases
ATGGCGTCAGAACAAGAGGAAAGGATTAAACAATTGTTCATAACAGAAGCAGAAGAACATTTAGTAACTTTAGAAAATGG
TTTGGTAGATTTGAAGTCTACAATATCAGATGTTGAAGTTATTAATGATATGTTTAGAGCGGCTCACTCTGTCAAAGGTG
GAGCTGCTATGTTGGGAATACACAGTGTAAAACAGATAGCTCATCGTTTAGAAGACTGTTTCAAAATAATTCGAGAAAAT
TCTATTAATGTTAACCAAACGATAGAGTCTCAATTTTTAAAAGGATATGATCTTCTCAAATATTTAGTAGAGCTTATGCA
AGGTCCTTACGGCTTGAGGGAAGAAGAGGGAGAAAAAATAGTACAAAATGCTTTACCTATTTTTGCTGAGTTAGAGAATA
ATTTGAATATTTTAGCTAGTACTGAAACTACTAATCAATCTACGACTACTAGCAATAAGAAAGAAAAAACTAGTTTTGAT
CAACAGGTAAAAGAGCAATTAAAGGAAATGTTGGAGCTTTTTAAAAAGGCTGATTCTCCATCTTCAAGGAAACAATTAAT
AGAAAGTTGTAATGGTTTGTTGAAGTTGGATACAAATACAAAAGCTTGGCAGGTTTTAGTTACTACTTCTCAAAAAGCTT
TGGCTAATTCTAAGTTGTCTTATCACGTTTTAGCACCTGTTATTATTAGGGAACTTAATCAAGCTGGTGAGTTTATCCAA
GTAGGAAAGGTGAAGGAAATAGTACTAAGTAAAGATTTAAAAGAAATTGCAATTTCTCCCAAAGCAAGAACTTGTGAAAA
TACAAAGGTAAGTTTACCAAAAGAACCGAAAGAAATGGTAAAACTAATTATTAATAATTTTGATTCTCGGCAAAAGGAAG
CGATCGCTAAGTTATTAATCAAGCATATAAAGTCGTCTAGAAATCGTTAA

Upstream 100 bases:

>100_bases
AGTTCTGTGGATGGTGATCTTTTTGGTTAGCTCTTTTTACTATTAAGAGTTTAATTTTAAAAGTCACTATCTGTAAACCA
ATACCTATAGGAGAAATATT

Downstream 100 bases:

>100_bases
TTCAGAAATAGTTATATTAACTATCAAAAACTTTGCTAGTCTTAAATTTTATATTTTACATACTATTTATTAATGTAGTT
TTTTTATTAAATAACTTCTA

Product: putative CheA signal transduction histidine kinase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 309; Mature: 308

Protein sequence:

>309_residues
MASEQEERIKQLFITEAEEHLVTLENGLVDLKSTISDVEVINDMFRAAHSVKGGAAMLGIHSVKQIAHRLEDCFKIIREN
SINVNQTIESQFLKGYDLLKYLVELMQGPYGLREEEGEKIVQNALPIFAELENNLNILASTETTNQSTTTSNKKEKTSFD
QQVKEQLKEMLELFKKADSPSSRKQLIESCNGLLKLDTNTKAWQVLVTTSQKALANSKLSYHVLAPVIIRELNQAGEFIQ
VGKVKEIVLSKDLKEIAISPKARTCENTKVSLPKEPKEMVKLIINNFDSRQKEAIAKLLIKHIKSSRNR

Sequences:

>Translated_309_residues
MASEQEERIKQLFITEAEEHLVTLENGLVDLKSTISDVEVINDMFRAAHSVKGGAAMLGIHSVKQIAHRLEDCFKIIREN
SINVNQTIESQFLKGYDLLKYLVELMQGPYGLREEEGEKIVQNALPIFAELENNLNILASTETTNQSTTTSNKKEKTSFD
QQVKEQLKEMLELFKKADSPSSRKQLIESCNGLLKLDTNTKAWQVLVTTSQKALANSKLSYHVLAPVIIRELNQAGEFIQ
VGKVKEIVLSKDLKEIAISPKARTCENTKVSLPKEPKEMVKLIINNFDSRQKEAIAKLLIKHIKSSRNR
>Mature_308_residues
ASEQEERIKQLFITEAEEHLVTLENGLVDLKSTISDVEVINDMFRAAHSVKGGAAMLGIHSVKQIAHRLEDCFKIIRENS
INVNQTIESQFLKGYDLLKYLVELMQGPYGLREEEGEKIVQNALPIFAELENNLNILASTETTNQSTTTSNKKEKTSFDQ
QVKEQLKEMLELFKKADSPSSRKQLIESCNGLLKLDTNTKAWQVLVTTSQKALANSKLSYHVLAPVIIRELNQAGEFIQV
GKVKEIVLSKDLKEIAISPKARTCENTKVSLPKEPKEMVKLIINNFDSRQKEAIAKLLIKHIKSSRNR

Specific function: Involved in the transmission of sensory signals from the chemoreceptors to the flagellar motors. CheA is autophosphorylated; it can transfer its phosphate group to either CheB or CheY [H]

COG id: COG0643

COG function: function code NT; Chemotaxis protein histidine kinase and related kinases

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HPt domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003594
- InterPro:   IPR002545
- InterPro:   IPR004358
- InterPro:   IPR008207
- InterPro:   IPR004105
- InterPro:   IPR005467
- InterPro:   IPR009082 [H]

Pfam domain/function: PF01584 CheW; PF02895 H-kinase_dim; PF02518 HATPase_c; PF01627 Hpt [H]

EC number: =2.7.13.3 [H]

Molecular weight: Translated: 34889; Mature: 34757

Theoretical pI: Translated: 8.45; Mature: 8.45

Prosite motif: PS50894 HPT

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASEQEERIKQLFITEAEEHLVTLENGLVDLKSTISDVEVINDMFRAAHSVKGGAAMLGI
CCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
HSVKQIAHRLEDCFKIIRENSINVNQTIESQFLKGYDLLKYLVELMQGPYGLREEEGEKI
HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH
VQNALPIFAELENNLNILASTETTNQSTTTSNKKEKTSFDQQVKEQLKEMLELFKKADSP
HHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC
SSRKQLIESCNGLLKLDTNTKAWQVLVTTSQKALANSKLSYHVLAPVIIRELNQAGEFIQ
HHHHHHHHHCCCEEEECCCCCEEEEEEECCHHHHHCCCCHHHHHHHHHHHHHHHHCCHHH
VGKVKEIVLSKDLKEIAISPKARTCENTKVSLPKEPKEMVKLIINNFDSRQKEAIAKLLI
HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHH
KHIKSSRNR
HHHHHCCCC
>Mature Secondary Structure 
ASEQEERIKQLFITEAEEHLVTLENGLVDLKSTISDVEVINDMFRAAHSVKGGAAMLGI
CCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
HSVKQIAHRLEDCFKIIRENSINVNQTIESQFLKGYDLLKYLVELMQGPYGLREEEGEKI
HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH
VQNALPIFAELENNLNILASTETTNQSTTTSNKKEKTSFDQQVKEQLKEMLELFKKADSP
HHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC
SSRKQLIESCNGLLKLDTNTKAWQVLVTTSQKALANSKLSYHVLAPVIIRELNQAGEFIQ
HHHHHHHHHCCCEEEECCCCCEEEEEEECCHHHHHCCCCHHHHHHHHHHHHHHHHCCHHH
VGKVKEIVLSKDLKEIAISPKARTCENTKVSLPKEPKEMVKLIINNFDSRQKEAIAKLLI
HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHH
KHIKSSRNR
HHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7623670; 11481430 [H]