Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113475972

Identifier: 113475972

GI number: 113475972

Start: 3615412

End: 3616089

Strand: Direct

Name: 113475972

Synonym: Tery_2340

Alternate gene names: NA

Gene position: 3615412-3616089 (Clockwise)

Preceding gene: 113475971

Following gene: 113475973

Centisome position: 46.65

GC content: 33.33

Gene sequence:

>678_bases
ATGTCATATTATGTCTACGGTTTTCTATATCTACCCGAATCATGTTTAGCATTGCCAAAAGGTATGGAAAAGGAAGTTGA
GCTAGTTCCATATCAAAATATTGCTGCTGTAGTTGAAGCAAATGTATCTATTGAAGCAATACAGGAAACAGAAGAAAAAT
TACTAGAAGCAATATTAGCCCATGATCGTGTAGTTAGAGAAATATTTCAGCAAGTATCTATGCTACCACTAAGATTTGGT
AATGCTTTTGCTCTGCGAGAAAATATTATTAATGATTTACAAAATAATCAGCAACAATATCTGAATATTTTAACTAAACT
GCAACAACAAGCAGAATATACTATTACTTTTACTCCAGTTTCTTATCCTTCTACCCTAGAAGTTAGTAAAGTTCGTGGCA
AAGCTTATTTATTAGCCAAAAAACAACAGTTTGAACAACAACAAGCTTTTCAAACTAAGCAACGTCAACAGTGGGAAAAT
ATACGTCAGTTAATATTCAAGAATTATCCCAAAGCAGTTTTTAGAGATAGTACGGAAAGTAAAATTAAGCAAGTACATCT
GTTGGCCAATCGTGATGCCAGAGTTATAACTACTGAAGAACTATCAACTTGGCAAACTGAGTGTTCTTATTGGCAAATTA
CTTTGAGCGAACAACTTCCTCCTTATCATTTTGTCTGA

Upstream 100 bases:

>100_bases
GAAGATGTTTTGACCAATGCAAAAGAAATCTGCTCCTTAAGTCTAAGTATAATTACTCCTAACTCATAACTCCCCATCCA
CTTAACACTAAGCAGTTAAA

Downstream 100 bases:

>100_bases
CTTTTAACTGGGAAAATAATCAAAAAAATCGTCAGGACTAACAAAAAAACTACGTATTGTGGATATTAATTTAGGCGATC
GCTATAGGAGAGTAAAACGT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 225; Mature: 224

Protein sequence:

>225_residues
MSYYVYGFLYLPESCLALPKGMEKEVELVPYQNIAAVVEANVSIEAIQETEEKLLEAILAHDRVVREIFQQVSMLPLRFG
NAFALRENIINDLQNNQQQYLNILTKLQQQAEYTITFTPVSYPSTLEVSKVRGKAYLLAKKQQFEQQQAFQTKQRQQWEN
IRQLIFKNYPKAVFRDSTESKIKQVHLLANRDARVITTEELSTWQTECSYWQITLSEQLPPYHFV

Sequences:

>Translated_225_residues
MSYYVYGFLYLPESCLALPKGMEKEVELVPYQNIAAVVEANVSIEAIQETEEKLLEAILAHDRVVREIFQQVSMLPLRFG
NAFALRENIINDLQNNQQQYLNILTKLQQQAEYTITFTPVSYPSTLEVSKVRGKAYLLAKKQQFEQQQAFQTKQRQQWEN
IRQLIFKNYPKAVFRDSTESKIKQVHLLANRDARVITTEELSTWQTECSYWQITLSEQLPPYHFV
>Mature_224_residues
SYYVYGFLYLPESCLALPKGMEKEVELVPYQNIAAVVEANVSIEAIQETEEKLLEAILAHDRVVREIFQQVSMLPLRFGN
AFALRENIINDLQNNQQQYLNILTKLQQQAEYTITFTPVSYPSTLEVSKVRGKAYLLAKKQQFEQQQAFQTKQRQQWENI
RQLIFKNYPKAVFRDSTESKIKQVHLLANRDARVITTEELSTWQTECSYWQITLSEQLPPYHFV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26361; Mature: 26230

Theoretical pI: Translated: 6.28; Mature: 6.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSYYVYGFLYLPESCLALPKGMEKEVELVPYQNIAAVVEANVSIEAIQETEEKLLEAILA
CCEEEEEEEECCHHHHHCCCCCCCCEEECCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
HDRVVREIFQQVSMLPLRFGNAFALRENIINDLQNNQQQYLNILTKLQQQAEYTITFTPV
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCEEEEEECC
SYPSTLEVSKVRGKAYLLAKKQQFEQQQAFQTKQRQQWENIRQLIFKNYPKAVFRDSTES
CCCCCCHHHHHCCHHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCHHH
KIKQVHLLANRDARVITTEELSTWQTECSYWQITLSEQLPPYHFV
HHHHHHHEECCCCEEEEHHHHHHHHHCCCEEEEEECCCCCCCCCC
>Mature Secondary Structure 
SYYVYGFLYLPESCLALPKGMEKEVELVPYQNIAAVVEANVSIEAIQETEEKLLEAILA
CEEEEEEEECCHHHHHCCCCCCCCEEECCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
HDRVVREIFQQVSMLPLRFGNAFALRENIINDLQNNQQQYLNILTKLQQQAEYTITFTPV
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCEEEEEECC
SYPSTLEVSKVRGKAYLLAKKQQFEQQQAFQTKQRQQWENIRQLIFKNYPKAVFRDSTES
CCCCCCHHHHHCCHHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCHHH
KIKQVHLLANRDARVITTEELSTWQTECSYWQITLSEQLPPYHFV
HHHHHHHEECCCCEEEEHHHHHHHHHCCCEEEEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA