| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is 113475905
Identifier: 113475905
GI number: 113475905
Start: 3523142
End: 3524452
Strand: Direct
Name: 113475905
Synonym: Tery_2265
Alternate gene names: NA
Gene position: 3523142-3524452 (Clockwise)
Preceding gene: 113475904
Following gene: 113475915
Centisome position: 45.46
GC content: 40.58
Gene sequence:
>1311_bases ATGACTCAATCAACTTCTTACTCTGAAATTACTAAATGCCGAGTTTGTGGCTCCGAAAAACTTACTCCAGTTTTAAGTTT GGGCAGCCAACCTCTCAGTGGAATTTATCCGTCCCCTGACTCTCCAGATCCATCTACTTCTCCTTTAGATTTAGTAATTT GTGATAGTGAGGAAGGCTGTCGAACGTTGCAACTAAAACACAGTGCAGATGCATGGGAAATGTATGGTGATAACTATGGT TTTCTCTCCGCAACAAGTCCAACAATGTGCCGTCACTTACAAGGTATTGTTACAGAAGCTTTGGAACTGGTACAACCCAA TCCTGGGGATGTGGTTTTAGACATCGCTTGCAATGATGGTACTTTACTGAACTTTTATCGCGATCGTAACCTAACTCGCA TAGGCATGGATCCATCAAGTAAAAAATCTGCAGATAAATTTGATGCAGACATTCAAGTTATCTATGATTTCTTTTCTGCT GATGGAGTACGGGAAATGGTGGGGGATAAGAAATGTAAAATCATTACTTCCATTGCCATGTTTTATGACCTGGAAGATCC AATAGACTTTATGAAGCAAATTCATTCTGTTTTAGCTCCAGATGGGATTTGGGTTTTTGAACTTTCCTATATGCCCCTGA TGTTGAAAAATCTGACCTACGGCCAGATTATGCACGAACATTTAACTTACCTGGGTTTGCAGCAAATTCAATGGATGGCA GAACGCGCTGACCTTAAAATACTCGATGTCAGTTTGAATTTTATGCATGGTGGTAGTTTTCGGATTAAAGCTGCCCGCAA GGAGAATCCGATGAAGCCTAACCATGAGGCGATCGAGAAAATTCTTGATGCCGAAAAGCCCCTGGCAACAATGGCTCCTT TCGAGCGATTCCACAATCGGATTATTCAACATCGGCATGAGATACGAGCATTTTTTGATCTGATGCGATCTTCTGGTAAA AAAGTCTATGGCTATGGAGCTTCGACTAAGGGGAATATTGTTTTGAATTATTGTGGCATTACCCCACAAGATTTGATAGC TATTAGCGACCTGGAACCTCAAAAAGATGGTGCGGTTACGCCAGGAACTCGGATTCCAATTATAAGTCACGAAAAGCTAC GAGAAATCCATCCTGATTATGCTCTGGTGTTGGCTTGGCATTATCGTCCAGAAATCATTAATAGTGAGATTAACTACTTG GAAAAAGGTGGGAAATTGGTATTTGATTTACCGCGTCCCCATACTGTTAATTTGGAAAATTATCAGTATTATTTGAATGC TTCCTTTGAAGACCTAGCTTTTTCTTTATAG
Upstream 100 bases:
>100_bases AGAACCACTATATCTAGTAGGGGTCAACTGCCTTTAACCCCTACAGATGGTGTATATTTTCATATTTTGCGTAAGTCCTG CATATTATCGAAAAAAATAA
Downstream 100 bases:
>100_bases ATTAAAGAATTGCTGCTGTTTTATGTTGGCCCGTAGAACAGACATCTTGTCTGTTCTGTGTAGGTTTTCATTGCCCTTTA AGTATTGCGGTAATTACTCT
Product: C-methyltransferase
Products: NA
Alternate protein names: Methyltransferase; SAM-Dependent Methyltransferase; NDP-Hexose 3-C-Methyltransferase TylCIII; NDP-Hexose 3-C-Methyltransferase Protein; D-Mycarose 3-C-Methyltransferase; Sugar 3-C-Methyl Transferase; Methyltransferase Type; Methyltransferase Family Protein; C-3 Methyl Transferase; NAD-Dependent Epimerase/Dehydratase; Methyltransferase-Like Protein; NDP-Hexose Methyltransferase; S-Adenosyl-L-Methionine-Dependent Methyltransferase; NDP-4-Keto-2 6-Dideoxyhexose 3-C-Methyltransferase; S-Adenosyl-Dependent Methyltransferase; S-Adenosyl-Dependent Methyl Transferase; NDP-Hexose 3-C-Methyltransferase; EryBIII NDP-4-Keto-2 6-Dideoxyhexose 3-C-Methyltransferase; C-Methyltransferase Family
Number of amino acids: Translated: 436; Mature: 435
Protein sequence:
>436_residues MTQSTSYSEITKCRVCGSEKLTPVLSLGSQPLSGIYPSPDSPDPSTSPLDLVICDSEEGCRTLQLKHSADAWEMYGDNYG FLSATSPTMCRHLQGIVTEALELVQPNPGDVVLDIACNDGTLLNFYRDRNLTRIGMDPSSKKSADKFDADIQVIYDFFSA DGVREMVGDKKCKIITSIAMFYDLEDPIDFMKQIHSVLAPDGIWVFELSYMPLMLKNLTYGQIMHEHLTYLGLQQIQWMA ERADLKILDVSLNFMHGGSFRIKAARKENPMKPNHEAIEKILDAEKPLATMAPFERFHNRIIQHRHEIRAFFDLMRSSGK KVYGYGASTKGNIVLNYCGITPQDLIAISDLEPQKDGAVTPGTRIPIISHEKLREIHPDYALVLAWHYRPEIINSEINYL EKGGKLVFDLPRPHTVNLENYQYYLNASFEDLAFSL
Sequences:
>Translated_436_residues MTQSTSYSEITKCRVCGSEKLTPVLSLGSQPLSGIYPSPDSPDPSTSPLDLVICDSEEGCRTLQLKHSADAWEMYGDNYG FLSATSPTMCRHLQGIVTEALELVQPNPGDVVLDIACNDGTLLNFYRDRNLTRIGMDPSSKKSADKFDADIQVIYDFFSA DGVREMVGDKKCKIITSIAMFYDLEDPIDFMKQIHSVLAPDGIWVFELSYMPLMLKNLTYGQIMHEHLTYLGLQQIQWMA ERADLKILDVSLNFMHGGSFRIKAARKENPMKPNHEAIEKILDAEKPLATMAPFERFHNRIIQHRHEIRAFFDLMRSSGK KVYGYGASTKGNIVLNYCGITPQDLIAISDLEPQKDGAVTPGTRIPIISHEKLREIHPDYALVLAWHYRPEIINSEINYL EKGGKLVFDLPRPHTVNLENYQYYLNASFEDLAFSL >Mature_435_residues TQSTSYSEITKCRVCGSEKLTPVLSLGSQPLSGIYPSPDSPDPSTSPLDLVICDSEEGCRTLQLKHSADAWEMYGDNYGF LSATSPTMCRHLQGIVTEALELVQPNPGDVVLDIACNDGTLLNFYRDRNLTRIGMDPSSKKSADKFDADIQVIYDFFSAD GVREMVGDKKCKIITSIAMFYDLEDPIDFMKQIHSVLAPDGIWVFELSYMPLMLKNLTYGQIMHEHLTYLGLQQIQWMAE RADLKILDVSLNFMHGGSFRIKAARKENPMKPNHEAIEKILDAEKPLATMAPFERFHNRIIQHRHEIRAFFDLMRSSGKK VYGYGASTKGNIVLNYCGITPQDLIAISDLEPQKDGAVTPGTRIPIISHEKLREIHPDYALVLAWHYRPEIINSEINYLE KGGKLVFDLPRPHTVNLENYQYYLNASFEDLAFSL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 49284; Mature: 49153
Theoretical pI: Translated: 5.57; Mature: 5.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQSTSYSEITKCRVCGSEKLTPVLSLGSQPLSGIYPSPDSPDPSTSPLDLVICDSEEGC CCCCCCHHHHHHHHCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCC RTLQLKHSADAWEMYGDNYGFLSATSPTMCRHLQGIVTEALELVQPNPGDVVLDIACNDG EEEEEECCCCHHHHCCCCCCEEECCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCC TLLNFYRDRNLTRIGMDPSSKKSADKFDADIQVIYDFFSADGVREMVGDKKCKIITSIAM EEEEEEECCCEEEECCCCCCCCCCHHHCCHHHHHHHHHCCCCHHHHHCCCHHHHHHHHHH FYDLEDPIDFMKQIHSVLAPDGIWVFELSYMPLMLKNLTYGQIMHEHLTYLGLQQIQWMA HHCCCCHHHHHHHHHHHHCCCCEEEEEECHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH ERADLKILDVSLNFMHGGSFRIKAARKENPMKPNHEAIEKILDAEKPLATMAPFERFHNR HHCCEEEEEEEEEEEECCCEEEEECCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHH IIQHRHEIRAFFDLMRSSGKKVYGYGASTKGNIVLNYCGITPQDLIAISDLEPQKDGAVT HHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCEEEEECCCCHHHEEEEECCCCCCCCCCC PGTRIPIISHEKLREIHPDYALVLAWHYRPEIINSEINYLEKGGKLVFDLPRPHTVNLEN CCCCCCEECHHHHHHCCCCEEEEEEEECCCHHHHHHHHHHHCCCEEEEECCCCCEECCCC YQYYLNASFEDLAFSL EEEEEECCHHHHHCCC >Mature Secondary Structure TQSTSYSEITKCRVCGSEKLTPVLSLGSQPLSGIYPSPDSPDPSTSPLDLVICDSEEGC CCCCCHHHHHHHHCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCC RTLQLKHSADAWEMYGDNYGFLSATSPTMCRHLQGIVTEALELVQPNPGDVVLDIACNDG EEEEEECCCCHHHHCCCCCCEEECCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCC TLLNFYRDRNLTRIGMDPSSKKSADKFDADIQVIYDFFSADGVREMVGDKKCKIITSIAM EEEEEEECCCEEEECCCCCCCCCCHHHCCHHHHHHHHHCCCCHHHHHCCCHHHHHHHHHH FYDLEDPIDFMKQIHSVLAPDGIWVFELSYMPLMLKNLTYGQIMHEHLTYLGLQQIQWMA HHCCCCHHHHHHHHHHHHCCCCEEEEEECHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH ERADLKILDVSLNFMHGGSFRIKAARKENPMKPNHEAIEKILDAEKPLATMAPFERFHNR HHCCEEEEEEEEEEEECCCEEEEECCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHH IIQHRHEIRAFFDLMRSSGKKVYGYGASTKGNIVLNYCGITPQDLIAISDLEPQKDGAVT HHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCEEEEECCCCHHHEEEEECCCCCCCCCCC PGTRIPIISHEKLREIHPDYALVLAWHYRPEIINSEINYLEKGGKLVFDLPRPHTVNLEN CCCCCCEECHHHHHHCCCCEEEEEEEECCCHHHHHHHHHHHCCCEEEEECCCCCEECCCC YQYYLNASFEDLAFSL EEEEEECCHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA