Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113475826

Identifier: 113475826

GI number: 113475826

Start: 3409177

End: 3410082

Strand: Direct

Name: 113475826

Synonym: Tery_2183

Alternate gene names: NA

Gene position: 3409177-3410082 (Clockwise)

Preceding gene: 113475825

Following gene: 113475829

Centisome position: 43.99

GC content: 32.01

Gene sequence:

>906_bases
ATGCAACAATGGGTTACTAATTTTCAAGGAGAACTAGCTGCCTTAAGTGGTGCATTTTTGTGGGCAGTATCTTCAGCAGC
TTATAGCTTACTTGGTCAAAAAATATCTGCCTTAAAATTAAATTTATTCAAAGGTTTAATAGCGATCGCTCTGATTTTTC
TAACTTTAATTATTAGTGGCAAACTTCAGACAGAACTAAACTTATTTACAATAAATTTACTTTTAATAAGCGGTATTATT
GGCATTGGTTTAGGAGATACTGCATTTTTTTATGCCCTCAAAAATATGGGTGCAAGAAGAACTCTTTTAGTGGGAACTTT
GTCTCCCCCAATAACCGCTTTACTAAGTTTAATTTTTTTAGAAGAACAATTAACCTTTGGTGCTTGGTGCGGAATTTTTA
TTACAGGAATAGGTGTAGCTTGGGTAATTTCAGAAAGAACTCCTGGTGTAGTAATTAGTAATATTAATATCAAACAAGGA
ATAGTTTGGGCAATATTAGCAGCAATAGCTAATTCTACTGGTATAATTCTTTCCCGTTTTGCTTTACTTTTCTCAGAGAT
TATTCCTTTATGGAGCACTTTATTCAGATTAATAGGAGGCATAATTATTGTTGTCTTTTTGTTACTTCTCCAGAGAACCA
GACAGGAAAAATCAGAAAAAATTAATTGGTCAATAAAACTTAGAATAGACATTTTTATTGTAACTTTTGGTGGTACTTAT
TTAGGTATTTGGTTACAACAAACTTCTCTCAAATATGCTTCCGCAGGTATCGCCCAAACTCTTTTAGCTACAAGTCCAAT
ATTTATCATTCCTATTGCTGTTAAAATGGGAGAAAAAATAAGTATTAGGTCAATTTTTGGAGTCTTAGTAGCAGTAATAG
GAATTAGCTTTTTATTTACTTTTTAG

Upstream 100 bases:

>100_bases
CCTGAATAAATCTATCAATGGTAATTTCTGCTCTAAAGGCAATGAATTACAGCACTTTTAGGACTCACCCTCTTTCTTAA
CTTATCCAAAGTCAAAAATT

Downstream 100 bases:

>100_bases
TAACAAATTGAGATAGAATATTAGTATGATAAATATTACCTATAAGAACCAAAAAAAAACTTGATTTTACCATATTTTTG
AACCGATGTATCCCTTACTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 301; Mature: 301

Protein sequence:

>301_residues
MQQWVTNFQGELAALSGAFLWAVSSAAYSLLGQKISALKLNLFKGLIAIALIFLTLIISGKLQTELNLFTINLLLISGII
GIGLGDTAFFYALKNMGARRTLLVGTLSPPITALLSLIFLEEQLTFGAWCGIFITGIGVAWVISERTPGVVISNINIKQG
IVWAILAAIANSTGIILSRFALLFSEIIPLWSTLFRLIGGIIIVVFLLLLQRTRQEKSEKINWSIKLRIDIFIVTFGGTY
LGIWLQQTSLKYASAGIAQTLLATSPIFIIPIAVKMGEKISIRSIFGVLVAVIGISFLFTF

Sequences:

>Translated_301_residues
MQQWVTNFQGELAALSGAFLWAVSSAAYSLLGQKISALKLNLFKGLIAIALIFLTLIISGKLQTELNLFTINLLLISGII
GIGLGDTAFFYALKNMGARRTLLVGTLSPPITALLSLIFLEEQLTFGAWCGIFITGIGVAWVISERTPGVVISNINIKQG
IVWAILAAIANSTGIILSRFALLFSEIIPLWSTLFRLIGGIIIVVFLLLLQRTRQEKSEKINWSIKLRIDIFIVTFGGTY
LGIWLQQTSLKYASAGIAQTLLATSPIFIIPIAVKMGEKISIRSIFGVLVAVIGISFLFTF
>Mature_301_residues
MQQWVTNFQGELAALSGAFLWAVSSAAYSLLGQKISALKLNLFKGLIAIALIFLTLIISGKLQTELNLFTINLLLISGII
GIGLGDTAFFYALKNMGARRTLLVGTLSPPITALLSLIFLEEQLTFGAWCGIFITGIGVAWVISERTPGVVISNINIKQG
IVWAILAAIANSTGIILSRFALLFSEIIPLWSTLFRLIGGIIIVVFLLLLQRTRQEKSEKINWSIKLRIDIFIVTFGGTY
LGIWLQQTSLKYASAGIAQTLLATSPIFIIPIAVKMGEKISIRSIFGVLVAVIGISFLFTF

Specific function: Unknown

COG id: COG0697

COG function: function code GER; Permeases of the drug/metabolite transporter (DMT) superfamily

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32769; Mature: 32769

Theoretical pI: Translated: 10.63; Mature: 10.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQQWVTNFQGELAALSGAFLWAVSSAAYSLLGQKISALKLNLFKGLIAIALIFLTLIISG
CCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
KLQTELNLFTINLLLISGIIGIGLGDTAFFYALKNMGARRTLLVGTLSPPITALLSLIFL
CCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHH
EEQLTFGAWCGIFITGIGVAWVISERTPGVVISNINIKQGIVWAILAAIANSTGIILSRF
HHHHHHHHHHHHHHHHHHHEEEEECCCCCEEEECCCHHHHHHHHHHHHHHCCCHHHHHHH
ALLFSEIIPLWSTLFRLIGGIIIVVFLLLLQRTRQEKSEKINWSIKLRIDIFIVTFGGTY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEEEEEEEECCCE
LGIWLQQTSLKYASAGIAQTLLATSPIFIIPIAVKMGEKISIRSIFGVLVAVIGISFLFT
EEEEHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHC
F
C
>Mature Secondary Structure
MQQWVTNFQGELAALSGAFLWAVSSAAYSLLGQKISALKLNLFKGLIAIALIFLTLIISG
CCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
KLQTELNLFTINLLLISGIIGIGLGDTAFFYALKNMGARRTLLVGTLSPPITALLSLIFL
CCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHH
EEQLTFGAWCGIFITGIGVAWVISERTPGVVISNINIKQGIVWAILAAIANSTGIILSRF
HHHHHHHHHHHHHHHHHHHEEEEECCCCCEEEECCCHHHHHHHHHHHHHHCCCHHHHHHH
ALLFSEIIPLWSTLFRLIGGIIIVVFLLLLQRTRQEKSEKINWSIKLRIDIFIVTFGGTY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEEEEEEEECCCE
LGIWLQQTSLKYASAGIAQTLLATSPIFIIPIAVKMGEKISIRSIFGVLVAVIGISFLFT
EEEEHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHC
F
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA