| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is 113475674
Identifier: 113475674
GI number: 113475674
Start: 3142781
End: 3143446
Strand: Direct
Name: 113475674
Synonym: Tery_2014
Alternate gene names: NA
Gene position: 3142781-3143446 (Clockwise)
Preceding gene: 113475673
Following gene: 113475679
Centisome position: 40.55
GC content: 41.29
Gene sequence:
>666_bases TTGATTAAGAAACTTGCAGATTTTGATGGCCAGATTACGGATGCCAATAAACAATTGCAAACATACACAGGCCAGCAATC GCAGATTTTGACACTTGCTAACCAGAATGTTGGATCGATTAAAACTACGATTGAGCAATTACGTCGTGAAGCTGATGCAG CGGAGAAAACTTGGAAAGACTATACTATTGCAGCGGTAACAACTTCAATTGGAATAACAGTTCTATCTGGAGGATTGTTG TGGTTTGTTGGCGCGGCAGCAGGCATTGGCCTAGGGATCAAGGCTGATACTCAAAAGGCGAAATACAACGCACTCATCGG TGAAATTGGGACGCAAAATGTGGAACTAAGTAAGAAATCGCGCTTAGTTACCGATCTAACAGGATTAAATACTCAGATTG GAAATGTTGCTCCAGCATTAGCTGATTTCAAAAATCAGCTTCAACAAATTCAAGGGGTTTGGGTAGGAGTGAGTGGGAAT TTGCAATATATTGCAACTAACTATGGTGTAGACCAGTTAAGCAGCCTTCCCTGGATTACTCAAGCCATGAAAATAGGTGA TGCAACTAAGAAGTGGCAGGAGATTGGAAGAACAACAGAACAATTTATAACCCATTCCTTGGTTAGCTATAACCAGGATA CTACTTGGGGTCAACAGATTGCTTAA
Upstream 100 bases:
>100_bases GAATGGGGACAAAAGAGGAGCGTGCAGAGTATCTTAGGGAAATTTTAGTTGGTCAAGGTGGACTAGTATCCACTGCCGAA GATATGAAGAAACCGATGCC
Downstream 100 bases:
>100_bases TTGTGTTGAGCTGGTGATATTTCATTAATCTGGGGAGATAGACAAATTTCCATCACCTTTTTAGCCAGTTTAGCCTGTTT TTACTAGAGTTGTTGAGAAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 221; Mature: 221
Protein sequence:
>221_residues MIKKLADFDGQITDANKQLQTYTGQQSQILTLANQNVGSIKTTIEQLRREADAAEKTWKDYTIAAVTTSIGITVLSGGLL WFVGAAAGIGLGIKADTQKAKYNALIGEIGTQNVELSKKSRLVTDLTGLNTQIGNVAPALADFKNQLQQIQGVWVGVSGN LQYIATNYGVDQLSSLPWITQAMKIGDATKKWQEIGRTTEQFITHSLVSYNQDTTWGQQIA
Sequences:
>Translated_221_residues MIKKLADFDGQITDANKQLQTYTGQQSQILTLANQNVGSIKTTIEQLRREADAAEKTWKDYTIAAVTTSIGITVLSGGLL WFVGAAAGIGLGIKADTQKAKYNALIGEIGTQNVELSKKSRLVTDLTGLNTQIGNVAPALADFKNQLQQIQGVWVGVSGN LQYIATNYGVDQLSSLPWITQAMKIGDATKKWQEIGRTTEQFITHSLVSYNQDTTWGQQIA >Mature_221_residues MIKKLADFDGQITDANKQLQTYTGQQSQILTLANQNVGSIKTTIEQLRREADAAEKTWKDYTIAAVTTSIGITVLSGGLL WFVGAAAGIGLGIKADTQKAKYNALIGEIGTQNVELSKKSRLVTDLTGLNTQIGNVAPALADFKNQLQQIQGVWVGVSGN LQYIATNYGVDQLSSLPWITQAMKIGDATKKWQEIGRTTEQFITHSLVSYNQDTTWGQQIA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24007; Mature: 24007
Theoretical pI: Translated: 8.77; Mature: 8.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 0.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIKKLADFDGQITDANKQLQTYTGQQSQILTLANQNVGSIKTTIEQLRREADAAEKTWKD CCCCCCCCCCCEECCCHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCC YTIAAVTTSIGITVLSGGLLWFVGAAAGIGLGIKADTQKAKYNALIGEIGTQNVELSKKS EEEEEHHHHHHHHHHHCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCCCHHH RLVTDLTGLNTQIGNVAPALADFKNQLQQIQGVWVGVSGNLQYIATNYGVDQLSSLPWIT HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCEEEEECCCEEEEEECCCHHHHHCCHHHH QAMKIGDATKKWQEIGRTTEQFITHSLVSYNQDTTWGQQIA HHHHHCCHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure MIKKLADFDGQITDANKQLQTYTGQQSQILTLANQNVGSIKTTIEQLRREADAAEKTWKD CCCCCCCCCCCEECCCHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCC YTIAAVTTSIGITVLSGGLLWFVGAAAGIGLGIKADTQKAKYNALIGEIGTQNVELSKKS EEEEEHHHHHHHHHHHCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCCCHHH RLVTDLTGLNTQIGNVAPALADFKNQLQQIQGVWVGVSGNLQYIATNYGVDQLSSLPWIT HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCEEEEECCCEEEEEECCCHHHHHCCHHHH QAMKIGDATKKWQEIGRTTEQFITHSLVSYNQDTTWGQQIA HHHHHCCHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA