| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is 113475631
Identifier: 113475631
GI number: 113475631
Start: 3048340
End: 3050928
Strand: Direct
Name: 113475631
Synonym: Tery_1967
Alternate gene names: NA
Gene position: 3048340-3050928 (Clockwise)
Preceding gene: 113475629
Following gene: 113475632
Centisome position: 39.33
GC content: 36.66
Gene sequence:
>2589_bases ATGAAAATGTATTTCTTTAGGAAAAAATCCGTTCAATTATTAGTAGTATTGCTAACTTTGATTGCTACTCCTAGGCAATT AACAGCTAATAATTTATCTTTTTTAAGTAATACTATCCTAAATCAATCCATCAACTCAGATACTACTTACTCAGCACCTA AATCATTACCAAGTGGCAGAAAAATCAAATTGTTTAGCTCTAGTAGTATGATAGTTATTAATCAAGTACTAAAACAAGTT TACGAAGAAAAATATCCAGATGCTCAAGTTGAAATAACAAGAGGTGATACAAGTGAACTATTAGAAGTACTTCTAAAAGG AGAAACAGATTTAGTAGCCTTGGGACGTCGATTAACTGCTGAAGAAAAAAACCAAGGATTAGTTGAAGTCCCCATTAATC GGGGTAAGATTGCTATTGTAGTTGCCTCAGATAATCCATTTCAAGAAAACCTCTCATTTGAGAAATTTGCTCAAATATTC CGGGGAGAAATCACCAATTGGTCAAAACTAGGTGGTCCACAACTGCCCATTCGCTTAATTGATCGCCCAGAATCTAGTGA TACGAGGGAAGCTCTCAAAAGCTATGATGTGTTTAAAAAAAGTCCATTTATGACTGGACGTAACGCTATCCAGTTATCCG AGGACGATACAGCAGTAGTCATAAAAGAACTAGGTAAAAATGGGATTAGTTATGCAATCATGGACCAAGTTCTCAACAGG GAAAATGTTCGGATTATTCCGATGCACAAAACTCTGCCGACTAACCCCCTATATCCATACTCTCAACCTCGTAACTTTGT TTACAAAAATGACACTGCCTCTCCAGAAGTTTTAGCATTTCTGGGTTTAGTCACTTCTGAAGATGGTCAACAAGTTGTGG CAAAAGCAGATAAACAAGGGAGAAGTGATTTAGCAAATCTTAGCTCGACCAATAAAGCGAACTCTTCAGATATAGTAACA TCACCTAGTCTTGATACTCAAATAAAGACAGAATTAAACAAACAAGAGAAAACTGATTCGGAAACTTTTGGAGGTCTGGT AACTGCACTTATAGGTGATATTGGTAAGGAAACGGGAACAAAAAGAATTCCCTGGTGGATTTTACTATTGTTGAATATTC CTATTCTTGGAGCATTACTATGGGTATTTCTTAGAAGACGTGGAAATCAGTCAGTAGGAACAGGTGGAACTAGAGTAGTT CCAGGAACAACTACAGATTCAGACTTCACCTCGGTAGGAGAAACTCTTTTTGCTGAGGCTGAAGTTACTGAGGCAAATGA TTTAACAGAAACAAGTTCAGAAAATGGTAATGAAGTAGCTGTTGTTGATCCCAGTATAAGTGTAGCAGGGGTAGAGGGAG TAGGAGAATTATTAGCAACCTGGGCTAGCCTTGAAAAAAATAGTCAAATAAGTCTGAGTCCAGGGGAAAGTCAAACAGTA TTAGCAAGTTGGTCAGTACCAGAAGCTGATCAACTTGCAGCTAAATTACATGGAGCTAAACAATATCAATTGCGGGTTTA TGATGTGACAGATATAGACCTAGATTTAGAACTGGCTGAAAGTATCAAGTATTATAATTTTGAAGATTCGAATCAGCAGT GGCAAATAGGAAGCTTACTGTTTGATCGCGAATATCAAGCTGAAATAGGTTATGCTACCGATGATGATCGATGGTTACTA TTGGCTCGTTCTAACCGGGTTAGAATAGATATATCCAAAAATGCTGATTTGGGAAGAGCTGGACAAGGGTTTGATAACCT TTTATTGAGAGATATAACGGTAGAAGATTATGTTAATAAAGATATTGAGGTAGTAAAAGAACCAGATTTAGAAAGGGGAG AAAGAGTAAGAGGGGTATTACTTCCCTGTAAAATTACTATTACTCCTGATGATGCAGAAAATATGATGGTGACTTGGAAA GTTTCTCAAACAGCACAAAATGCATTAAAAGAACAGGGTGGAAAAGAATATCAACTGCGTATTTATGATGTGACGGATAT TGACTTAGATAAACAGCCAGCCTACAATGTACAAGGTTATAATTGTCAAGAATCAATTCAGGAAATGCAAGTACCTGTTT TGATGATTAACCGCGAATATCAAGCTGAGATAGGCTATGTTACTGATTATGGCAAATTGTTGAAATTAGCTCGTTCTAAT CGTATCCGCATACCTGCTATTGAAATTGATGATGTAAAAACTACACAGCTCAATGTAACTCAGACTAAAGCGGTAATTCA AGAGGAAGCATTGAAATCAAGTTGGGTTATTATAGTTCCTGTTAGTAGTCAAAGCGCCTATGTTCATTGGGGAGTTTCTC AAACTGCTAAAAATTTAGCTAAACAACAAGGTGGACAGCAATACCAGTTACGAATTTTTGATATTACAGATATTGATATA GACTCACAGAACGCTCAAAATGTACAACAGTATGATTGTGATGGATCTAGCCAGAAACAAGAAATTCCTATCAATGTTAG TTCTGTTGGCTATGTTGATTATTTCGCAGAAATTGGTTATGTTACTGATGATTCGCAGTGGTTGATTATTGCTCGTTCTA ATCCTCTGCGAATACCTGTTTTGATTTAG
Upstream 100 bases:
>100_bases ATTAGTAAAAAGTACTAATTTTTAATAATAAGTTTATAGGTCAAATTAATGGGTTTTTATCAACTTCAATTTAATAATAT TTGATAAATATAAAAGCTAT
Downstream 100 bases:
>100_bases GAACAAAAATTCAATAAGATCCATTATTGAGATTTGTGGTTTAGCAATATAATTTTATTGGGGTAAATAATTATTAAAAA TAATTTTCCTTCTTGGTTAG
Product: phosphate ABC transporter periplasmic component-like protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 862; Mature: 862
Protein sequence:
>862_residues MKMYFFRKKSVQLLVVLLTLIATPRQLTANNLSFLSNTILNQSINSDTTYSAPKSLPSGRKIKLFSSSSMIVINQVLKQV YEEKYPDAQVEITRGDTSELLEVLLKGETDLVALGRRLTAEEKNQGLVEVPINRGKIAIVVASDNPFQENLSFEKFAQIF RGEITNWSKLGGPQLPIRLIDRPESSDTREALKSYDVFKKSPFMTGRNAIQLSEDDTAVVIKELGKNGISYAIMDQVLNR ENVRIIPMHKTLPTNPLYPYSQPRNFVYKNDTASPEVLAFLGLVTSEDGQQVVAKADKQGRSDLANLSSTNKANSSDIVT SPSLDTQIKTELNKQEKTDSETFGGLVTALIGDIGKETGTKRIPWWILLLLNIPILGALLWVFLRRRGNQSVGTGGTRVV PGTTTDSDFTSVGETLFAEAEVTEANDLTETSSENGNEVAVVDPSISVAGVEGVGELLATWASLEKNSQISLSPGESQTV LASWSVPEADQLAAKLHGAKQYQLRVYDVTDIDLDLELAESIKYYNFEDSNQQWQIGSLLFDREYQAEIGYATDDDRWLL LARSNRVRIDISKNADLGRAGQGFDNLLLRDITVEDYVNKDIEVVKEPDLERGERVRGVLLPCKITITPDDAENMMVTWK VSQTAQNALKEQGGKEYQLRIYDVTDIDLDKQPAYNVQGYNCQESIQEMQVPVLMINREYQAEIGYVTDYGKLLKLARSN RIRIPAIEIDDVKTTQLNVTQTKAVIQEEALKSSWVIIVPVSSQSAYVHWGVSQTAKNLAKQQGGQQYQLRIFDITDIDI DSQNAQNVQQYDCDGSSQKQEIPINVSSVGYVDYFAEIGYVTDDSQWLIIARSNPLRIPVLI
Sequences:
>Translated_862_residues MKMYFFRKKSVQLLVVLLTLIATPRQLTANNLSFLSNTILNQSINSDTTYSAPKSLPSGRKIKLFSSSSMIVINQVLKQV YEEKYPDAQVEITRGDTSELLEVLLKGETDLVALGRRLTAEEKNQGLVEVPINRGKIAIVVASDNPFQENLSFEKFAQIF RGEITNWSKLGGPQLPIRLIDRPESSDTREALKSYDVFKKSPFMTGRNAIQLSEDDTAVVIKELGKNGISYAIMDQVLNR ENVRIIPMHKTLPTNPLYPYSQPRNFVYKNDTASPEVLAFLGLVTSEDGQQVVAKADKQGRSDLANLSSTNKANSSDIVT SPSLDTQIKTELNKQEKTDSETFGGLVTALIGDIGKETGTKRIPWWILLLLNIPILGALLWVFLRRRGNQSVGTGGTRVV PGTTTDSDFTSVGETLFAEAEVTEANDLTETSSENGNEVAVVDPSISVAGVEGVGELLATWASLEKNSQISLSPGESQTV LASWSVPEADQLAAKLHGAKQYQLRVYDVTDIDLDLELAESIKYYNFEDSNQQWQIGSLLFDREYQAEIGYATDDDRWLL LARSNRVRIDISKNADLGRAGQGFDNLLLRDITVEDYVNKDIEVVKEPDLERGERVRGVLLPCKITITPDDAENMMVTWK VSQTAQNALKEQGGKEYQLRIYDVTDIDLDKQPAYNVQGYNCQESIQEMQVPVLMINREYQAEIGYVTDYGKLLKLARSN RIRIPAIEIDDVKTTQLNVTQTKAVIQEEALKSSWVIIVPVSSQSAYVHWGVSQTAKNLAKQQGGQQYQLRIFDITDIDI DSQNAQNVQQYDCDGSSQKQEIPINVSSVGYVDYFAEIGYVTDDSQWLIIARSNPLRIPVLI >Mature_862_residues MKMYFFRKKSVQLLVVLLTLIATPRQLTANNLSFLSNTILNQSINSDTTYSAPKSLPSGRKIKLFSSSSMIVINQVLKQV YEEKYPDAQVEITRGDTSELLEVLLKGETDLVALGRRLTAEEKNQGLVEVPINRGKIAIVVASDNPFQENLSFEKFAQIF RGEITNWSKLGGPQLPIRLIDRPESSDTREALKSYDVFKKSPFMTGRNAIQLSEDDTAVVIKELGKNGISYAIMDQVLNR ENVRIIPMHKTLPTNPLYPYSQPRNFVYKNDTASPEVLAFLGLVTSEDGQQVVAKADKQGRSDLANLSSTNKANSSDIVT SPSLDTQIKTELNKQEKTDSETFGGLVTALIGDIGKETGTKRIPWWILLLLNIPILGALLWVFLRRRGNQSVGTGGTRVV PGTTTDSDFTSVGETLFAEAEVTEANDLTETSSENGNEVAVVDPSISVAGVEGVGELLATWASLEKNSQISLSPGESQTV LASWSVPEADQLAAKLHGAKQYQLRVYDVTDIDLDLELAESIKYYNFEDSNQQWQIGSLLFDREYQAEIGYATDDDRWLL LARSNRVRIDISKNADLGRAGQGFDNLLLRDITVEDYVNKDIEVVKEPDLERGERVRGVLLPCKITITPDDAENMMVTWK VSQTAQNALKEQGGKEYQLRIYDVTDIDLDKQPAYNVQGYNCQESIQEMQVPVLMINREYQAEIGYVTDYGKLLKLARSN RIRIPAIEIDDVKTTQLNVTQTKAVIQEEALKSSWVIIVPVSSQSAYVHWGVSQTAKNLAKQQGGQQYQLRIFDITDIDI DSQNAQNVQQYDCDGSSQKQEIPINVSSVGYVDYFAEIGYVTDDSQWLIIARSNPLRIPVLI
Specific function: Unknown
COG id: COG0226
COG function: function code P; ABC-type phosphate transport system, periplasmic component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 96104; Mature: 96104
Theoretical pI: Translated: 4.59; Mature: 4.59
Prosite motif: PS50042 CNMP_BINDING_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKMYFFRKKSVQLLVVLLTLIATPRQLTANNLSFLSNTILNQSINSDTTYSAPKSLPSGR CCEEEEECCHHHHHHHHHHHHCCCCHHHHCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC KIKLFSSSSMIVINQVLKQVYEEKYPDAQVEITRGDTSELLEVLLKGETDLVALGRRLTA EEEEECCCCCHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHCCCCCHHHHCCCCCC EEKNQGLVEVPINRGKIAIVVASDNPFQENLSFEKFAQIFRGEITNWSKLGGPQLPIRLI HHHCCCEEEEECCCCEEEEEEECCCCHHHCCCHHHHHHHHHCCCCCHHHCCCCCCCEEEE DRPESSDTREALKSYDVFKKSPFMTGRNAIQLSEDDTAVVIKELGKNGISYAIMDQVLNR CCCCCCHHHHHHHHHHHHHCCCCCCCCCEEEECCCCHHHHHHHHCCCCCHHHHHHHHHCC ENVRIIPMHKTLPTNPLYPYSQPRNFVYKNDTASPEVLAFLGLVTSEDGQQVVAKADKQG CCCEEEEECCCCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHCCCCCHHHHHHHHHCC RSDLANLSSTNKANSSDIVTSPSLDTQIKTELNKQEKTDSETFGGLVTALIGDIGKETGT HHHHHHCCCCCCCCCCCEEECCCCCCHHHHHHCHHHCCCHHHHHHHHHHHHHHHHHHCCC KRIPWWILLLLNIPILGALLWVFLRRRGNQSVGTGGTRVVPGTTTDSDFTSVGETLFAEA CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCCCCCHHHHHHHHHEECC EVTEANDLTETSSENGNEVAVVDPSISVAGVEGVGELLATWASLEKNSQISLSPGESQTV CCCCCCCCCCCCCCCCCEEEEECCCCEEECHHHHHHHHHHHHHHCCCCEEEECCCCCCEE LASWSVPEADQLAAKLHGAKQYQLRVYDVTDIDLDLELAESIKYYNFEDSNQQWQIGSLL EEECCCCCHHHHHHHHCCCEEEEEEEEEEEECCCCHHHHHCCEECCCCCCCCCEEECCEE FDREYQAEIGYATDDDRWLLLARSNRVRIDISKNADLGRAGQGFDNLLLRDITVEDYVNK ECCCHHCCCCCCCCCCCEEEEEECCEEEEEECCCCCCCCCCCCHHHHEEEEEEHHHHCCC DIEVVKEPDLERGERVRGVLLPCKITITPDDAENMMVTWKVSQTAQNALKEQGGKEYQLR CCEEECCCCCCCCCCCCEEEEEEEEEECCCCCCCEEEEEEEHHHHHHHHHHCCCCEEEEE IYDVTDIDLDKQPAYNVQGYNCQESIQEMQVPVLMINREYQAEIGYVTDYGKLLKLARSN EEEEEECCCCCCCCCCCCCCCHHHHHHHHCCCEEEECCCCCCCCCEEECHHHHHHHHHCC RIRIPAIEIDDVKTTQLNVTQTKAVIQEEALKSSWVIIVPVSSQSAYVHWGVSQTAKNLA CEEEEEEEECCCEEEEEEHHHHHHHHHHHHHCCCCEEEEEECCCCEEEEECHHHHHHHHH KQQGGQQYQLRIFDITDIDIDSQNAQNVQQYDCDGSSQKQEIPINVSSVGYVDYFAEIGY HHCCCCEEEEEEEEEEECCCCCCCCCCHHHCCCCCCCCCCCCCEEECCCCHHHHHHHCCE VTDDSQWLIIARSNPLRIPVLI EECCCCEEEEECCCCCEEEEEC >Mature Secondary Structure MKMYFFRKKSVQLLVVLLTLIATPRQLTANNLSFLSNTILNQSINSDTTYSAPKSLPSGR CCEEEEECCHHHHHHHHHHHHCCCCHHHHCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC KIKLFSSSSMIVINQVLKQVYEEKYPDAQVEITRGDTSELLEVLLKGETDLVALGRRLTA EEEEECCCCCHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHCCCCCHHHHCCCCCC EEKNQGLVEVPINRGKIAIVVASDNPFQENLSFEKFAQIFRGEITNWSKLGGPQLPIRLI HHHCCCEEEEECCCCEEEEEEECCCCHHHCCCHHHHHHHHHCCCCCHHHCCCCCCCEEEE DRPESSDTREALKSYDVFKKSPFMTGRNAIQLSEDDTAVVIKELGKNGISYAIMDQVLNR CCCCCCHHHHHHHHHHHHHCCCCCCCCCEEEECCCCHHHHHHHHCCCCCHHHHHHHHHCC ENVRIIPMHKTLPTNPLYPYSQPRNFVYKNDTASPEVLAFLGLVTSEDGQQVVAKADKQG CCCEEEEECCCCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHCCCCCHHHHHHHHHCC RSDLANLSSTNKANSSDIVTSPSLDTQIKTELNKQEKTDSETFGGLVTALIGDIGKETGT HHHHHHCCCCCCCCCCCEEECCCCCCHHHHHHCHHHCCCHHHHHHHHHHHHHHHHHHCCC KRIPWWILLLLNIPILGALLWVFLRRRGNQSVGTGGTRVVPGTTTDSDFTSVGETLFAEA CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCCCCCHHHHHHHHHEECC EVTEANDLTETSSENGNEVAVVDPSISVAGVEGVGELLATWASLEKNSQISLSPGESQTV CCCCCCCCCCCCCCCCCEEEEECCCCEEECHHHHHHHHHHHHHHCCCCEEEECCCCCCEE LASWSVPEADQLAAKLHGAKQYQLRVYDVTDIDLDLELAESIKYYNFEDSNQQWQIGSLL EEECCCCCHHHHHHHHCCCEEEEEEEEEEEECCCCHHHHHCCEECCCCCCCCCEEECCEE FDREYQAEIGYATDDDRWLLLARSNRVRIDISKNADLGRAGQGFDNLLLRDITVEDYVNK ECCCHHCCCCCCCCCCCEEEEEECCEEEEEECCCCCCCCCCCCHHHHEEEEEEHHHHCCC DIEVVKEPDLERGERVRGVLLPCKITITPDDAENMMVTWKVSQTAQNALKEQGGKEYQLR CCEEECCCCCCCCCCCCEEEEEEEEEECCCCCCCEEEEEEEHHHHHHHHHHCCCCEEEEE IYDVTDIDLDKQPAYNVQGYNCQESIQEMQVPVLMINREYQAEIGYVTDYGKLLKLARSN EEEEEECCCCCCCCCCCCCCCHHHHHHHHCCCEEEECCCCCCCCCEEECHHHHHHHHHCC RIRIPAIEIDDVKTTQLNVTQTKAVIQEEALKSSWVIIVPVSSQSAYVHWGVSQTAKNLA CEEEEEEEECCCEEEEEEHHHHHHHHHHHHHCCCCEEEEEECCCCEEEEECHHHHHHHHH KQQGGQQYQLRIFDITDIDIDSQNAQNVQQYDCDGSSQKQEIPINVSSVGYVDYFAEIGY HHCCCCEEEEEEEEEEECCCCCCCCCCHHHCCCCCCCCCCCCCEEECCCCHHHHHHHCCE VTDDSQWLIIARSNPLRIPVLI EECCCCEEEEECCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA