Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113475632

Identifier: 113475632

GI number: 113475632

Start: 3052338

End: 3052799

Strand: Direct

Name: 113475632

Synonym: Tery_1968

Alternate gene names: NA

Gene position: 3052338-3052799 (Clockwise)

Preceding gene: 113475631

Following gene: 113475633

Centisome position: 39.38

GC content: 40.04

Gene sequence:

>462_bases
GTGGCTCATACATTTATATTAGAATCAGGCAAGTGGAATATAGCAGGAAATTGGTTAGAACGTAATGGAATGTTAATTAC
TGTCAAGGGTAAAACTATCGTGACATGGGATCGTACGGATTGGTTCTCTATGGTAACAAAACTAATATTTCCCACTCAAG
ACCGTGAGGAAATTATTTTACAATACAGAGGCCGTCTTGACAGTGATGAACGACGCTATACCTTTGTTCTTCAGCATAGT
GAGCTAGGACAAGTGGAAGGAGAAGGATGGCTTGGTATTGATTCAATTACTCAACGCTATTGGGTACTTGGAAATGATGC
ACAACGTCGTAGTGGTTTTGAAACCTTACGTCGCTTAGATGAAGAGCGATATTACAGTAATAGTGCGGTTTTAACAGGTC
TTTCTTTGCTTAGTGCTATGGAAGCAACTATGGAGCGTATAGAGCCTTATGCAGAGAGTTAA

Upstream 100 bases:

>100_bases
TTGGAGGTTAGTTGTCATGACAACCATTACTAATGGTAATTGTGGGGTATCCAAGCCGTAAATTTGATCAAGCTAGCATT
AGCAGCATAGGAATAAGACT

Downstream 100 bases:

>100_bases
TATGATCAGGGCTTACCCAAGCAAGCTATATATAGTGTACTGAAATATTTAATTTTTAATACTATAGTTTGTGGTTTTTC
CGGATAGATATTACTTTAGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 153; Mature: 152

Protein sequence:

>153_residues
MAHTFILESGKWNIAGNWLERNGMLITVKGKTIVTWDRTDWFSMVTKLIFPTQDREEIILQYRGRLDSDERRYTFVLQHS
ELGQVEGEGWLGIDSITQRYWVLGNDAQRRSGFETLRRLDEERYYSNSAVLTGLSLLSAMEATMERIEPYAES

Sequences:

>Translated_153_residues
MAHTFILESGKWNIAGNWLERNGMLITVKGKTIVTWDRTDWFSMVTKLIFPTQDREEIILQYRGRLDSDERRYTFVLQHS
ELGQVEGEGWLGIDSITQRYWVLGNDAQRRSGFETLRRLDEERYYSNSAVLTGLSLLSAMEATMERIEPYAES
>Mature_152_residues
AHTFILESGKWNIAGNWLERNGMLITVKGKTIVTWDRTDWFSMVTKLIFPTQDREEIILQYRGRLDSDERRYTFVLQHSE
LGQVEGEGWLGIDSITQRYWVLGNDAQRRSGFETLRRLDEERYYSNSAVLTGLSLLSAMEATMERIEPYAES

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17860; Mature: 17729

Theoretical pI: Translated: 4.86; Mature: 4.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAHTFILESGKWNIAGNWLERNGMLITVKGKTIVTWDRTDWFSMVTKLIFPTQDREEIIL
CCCEEEEECCCCEEECCEEECCCEEEEEECCEEEEECCCHHHHHHHHHHCCCCCHHHHHH
QYRGRLDSDERRYTFVLQHSELGQVEGEGWLGIDSITQRYWVLGNDAQRRSGFETLRRLD
HHCCCCCCCCCEEEEEEECCCCCCCCCCCCCCHHHHHHEEEEECCCHHHHHHHHHHHHHH
EERYYSNSAVLTGLSLLSAMEATMERIEPYAES
HHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
AHTFILESGKWNIAGNWLERNGMLITVKGKTIVTWDRTDWFSMVTKLIFPTQDREEIIL
CCEEEEECCCCEEECCEEECCCEEEEEECCEEEEECCCHHHHHHHHHHCCCCCHHHHHH
QYRGRLDSDERRYTFVLQHSELGQVEGEGWLGIDSITQRYWVLGNDAQRRSGFETLRRLD
HHCCCCCCCCCEEEEEEECCCCCCCCCCCCCCHHHHHHEEEEECCCHHHHHHHHHHHHHH
EERYYSNSAVLTGLSLLSAMEATMERIEPYAES
HHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA