Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

Click here to switch to the map view.

The map label for this gene is 113475515

Identifier: 113475515

GI number: 113475515

Start: 2830920

End: 2831507

Strand: Direct

Name: 113475515

Synonym: Tery_1847

Alternate gene names: NA

Gene position: 2830920-2831507 (Clockwise)

Preceding gene: 113475514

Following gene: 113475518

Centisome position: 36.53

GC content: 30.61

Gene sequence:

>588_bases
ATGGTAAATAAAATTTCTGCTGAAGAATTTTATGATGATTTTGCTCCTAACTATGATGATGTATTAAAAGACCCCAAGTG
TAATGCACAGCACGTCTATGAGGCAGCTAAAATATTTCATCAATATAATTACCATCAAGGTAGTATTTTAGATATAGGTT
GTGGAACAGGCTTTCTAAGTGAATTATTAGAGGGAAATTTTGAATATACAGGTATTGATGTTTCGGCTAATATGCTGGAA
TATTCAGCTAAAAGAGGTTATCAAACTATCCATAAACCAATAGAAACGGCTTTACCTAAAATTGATACTCAATCCTACGA
TTTTGTTTTTTGTCTGGGAGCATTATTATTTGTTGAAGATGCTCAAAAAGCTATAGAGCATATTTATCGAATTGCTCGTA
AAGCTATTTTAATAAGTCTTGATGAGACAACCGAGGAATATATCAAAAATTTTGCTGTGCTAGTTTATGACCATTCAAAA
ATTACAATTAAAAATGCCATTGAAGATTATTTGATTATAGGTTGGACTTCTACAACTACAGGTATTTCTATCCGAACTCG
TATGATTTATATTGAACAAAAAAATTAA

Upstream 100 bases:

>100_bases
AAAAACTAAGATAATGGTTGACTAAGATTTAATATTTAATGTTGCCTATTGATCGTATTACATGGAAGAGTAAACATAAG
TAAATCTTGAACTATAAATT

Downstream 100 bases:

>100_bases
GGTAACTGTAAATTAGTAGTGATGATTTCTAGTTGATATCCTAAGAGTGAGAAAGGTATACTGAAAGCATCACTACTTCT
AAAAATTGTCTTTTGTTAAA

Product: type 11 methyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 195; Mature: 195

Protein sequence:

>195_residues
MVNKISAEEFYDDFAPNYDDVLKDPKCNAQHVYEAAKIFHQYNYHQGSILDIGCGTGFLSELLEGNFEYTGIDVSANMLE
YSAKRGYQTIHKPIETALPKIDTQSYDFVFCLGALLFVEDAQKAIEHIYRIARKAILISLDETTEEYIKNFAVLVYDHSK
ITIKNAIEDYLIIGWTSTTTGISIRTRMIYIEQKN

Sequences:

>Translated_195_residues
MVNKISAEEFYDDFAPNYDDVLKDPKCNAQHVYEAAKIFHQYNYHQGSILDIGCGTGFLSELLEGNFEYTGIDVSANMLE
YSAKRGYQTIHKPIETALPKIDTQSYDFVFCLGALLFVEDAQKAIEHIYRIARKAILISLDETTEEYIKNFAVLVYDHSK
ITIKNAIEDYLIIGWTSTTTGISIRTRMIYIEQKN
>Mature_195_residues
MVNKISAEEFYDDFAPNYDDVLKDPKCNAQHVYEAAKIFHQYNYHQGSILDIGCGTGFLSELLEGNFEYTGIDVSANMLE
YSAKRGYQTIHKPIETALPKIDTQSYDFVFCLGALLFVEDAQKAIEHIYRIARKAILISLDETTEEYIKNFAVLVYDHSK
ITIKNAIEDYLIIGWTSTTTGISIRTRMIYIEQKN

Specific function: Unknown

COG id: COG0500

COG function: function code QR; SAM-dependent methyltransferases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22334; Mature: 22334

Theoretical pI: Translated: 4.79; Mature: 4.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVNKISAEEFYDDFAPNYDDVLKDPKCNAQHVYEAAKIFHQYNYHQGSILDIGCGTGFLS
CCCCCCHHHHHHHHCCCHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCEEEECCCHHHHH
ELLEGNFEYTGIDVSANMLEYSAKRGYQTIHKPIETALPKIDTQSYDFVFCLGALLFVED
HHHHCCCEEEEEECHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHH
AQKAIEHIYRIARKAILISLDETTEEYIKNFAVLVYDHSKITIKNAIEDYLIIGWTSTTT
HHHHHHHHHHHHHHHHEEEECHHHHHHHHCEEEEEEECCEEEEHHCCCCEEEEEECCCCC
GISIRTRMIYIEQKN
CEEEEEEEEEEEECC
>Mature Secondary Structure
MVNKISAEEFYDDFAPNYDDVLKDPKCNAQHVYEAAKIFHQYNYHQGSILDIGCGTGFLS
CCCCCCHHHHHHHHCCCHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCEEEECCCHHHHH
ELLEGNFEYTGIDVSANMLEYSAKRGYQTIHKPIETALPKIDTQSYDFVFCLGALLFVED
HHHHCCCEEEEEECHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHH
AQKAIEHIYRIARKAILISLDETTEEYIKNFAVLVYDHSKITIKNAIEDYLIIGWTSTTT
HHHHHHHHHHHHHHHHEEEECHHHHHHHHCEEEEEEECCEEEEHHCCCCEEEEEECCCCC
GISIRTRMIYIEQKN
CEEEEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA