Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is qor [H]

Identifier: 113475500

GI number: 113475500

Start: 2798463

End: 2799458

Strand: Direct

Name: qor [H]

Synonym: Tery_1832

Alternate gene names: 113475500

Gene position: 2798463-2799458 (Clockwise)

Preceding gene: 113475499

Following gene: 113475502

Centisome position: 36.11

GC content: 38.15

Gene sequence:

>996_bases
ATGAAAGCAGTTGTAATGATATCACCTGGGACACCAGAAGTTTTGCAAGTACAGCAGGTTGCTGATCCTGTAATTGAAAA
TGATAGAGAAGTCTTAATCCGTTTAAAAGCTGCCGGAGTCAATCCTATTGATACCAAATTAAGGACTCGTGGCACTCTTT
ACCCAGATAAAATGCCAGCTATTTTAGGATGTGATGGAGCGGGTATTGTGGAAGCTATTGGTAAAAATGTACAAAAGTTT
CAAGTGGGAGATGAAGTTTATTTTTGTAATAGTGGTATCGGAGCTGCTCCAGGAAATTATGCAGAATTGGCTGTTGTTGA
TGAAAGATTTGTCGAGAACAAACCGAGTTCTTTAAGCTTTGTTGAAGCTGCTGCTGCACCCTTAGTTTTAATTACTGCCT
GGGAATCTTTGTATGATCGAGGAAAGTTACAAGCTGGTAGAAAAGTCTTGATTCATGGTGGTGCTGGTGGTGTTGGTCAT
GTGGCTATACAGTTGGCAAAGTTACAGGGTGCTGAAGTTGCTACTACTATTAGTTCAAAAGAAAAATCAGATTTTGTTAA
AAGTTTGGGAACAGATTTAGCAATTTTTAAGAATGAAGATTTTGTGAAAGTTGTTTTAGATTGGACTAATGGGGAAGGGG
TAGATTTGGCTTTCGATACTATTGGTGGTAAGGTTTTCTATGATACTATTCCGGCAGTAAAAGTTTATGGAGATTTAGTA
ACAATTTTAGAGCCTGATACTAGCTTAGGAAATTTGAAAGTTGCTAGGCAAAGAAATCTGCGAATTGGGTTGGAATTAAT
GTTAACTCCAATGACGAAAGGACTGATGGAAGCTCAAGAAGACCAAGCTAAAATTTTGCAGCAATGTAGACGGTTATTTG
ACCAAGGAAAGCTGAAGATTCATGTGAATAGAACTTTTGCTCTAGACGACGCCATAGAAGCACATCGAATTTTGGAAGCA
GGGTCTATGCTTGGTAAGATTGTTTTGACTATTTAA

Upstream 100 bases:

>100_bases
TAAAGACCTATTATTATTTTTCGTCCTCATGCCAAATTTTCTCGATCAGCCTAGTTTATGGGTAAGTCCTAATACTTTTT
AATTTCAGGAAAAATCTACT

Downstream 100 bases:

>100_bases
TTTTGAATAGGTAGGGATTTTCCATGGAACGGAACTAAATCTTAGGGTTCAAAGACATAAGATATCTTTGCTCTTAGTCT
ATAATTCTTAAAAATATTAA

Product: zinc-binding alcohol dehydrogenase

Products: NA

Alternate protein names: NADPH:quinone reductase [H]

Number of amino acids: Translated: 331; Mature: 331

Protein sequence:

>331_residues
MKAVVMISPGTPEVLQVQQVADPVIENDREVLIRLKAAGVNPIDTKLRTRGTLYPDKMPAILGCDGAGIVEAIGKNVQKF
QVGDEVYFCNSGIGAAPGNYAELAVVDERFVENKPSSLSFVEAAAAPLVLITAWESLYDRGKLQAGRKVLIHGGAGGVGH
VAIQLAKLQGAEVATTISSKEKSDFVKSLGTDLAIFKNEDFVKVVLDWTNGEGVDLAFDTIGGKVFYDTIPAVKVYGDLV
TILEPDTSLGNLKVARQRNLRIGLELMLTPMTKGLMEAQEDQAKILQQCRRLFDQGKLKIHVNRTFALDDAIEAHRILEA
GSMLGKIVLTI

Sequences:

>Translated_331_residues
MKAVVMISPGTPEVLQVQQVADPVIENDREVLIRLKAAGVNPIDTKLRTRGTLYPDKMPAILGCDGAGIVEAIGKNVQKF
QVGDEVYFCNSGIGAAPGNYAELAVVDERFVENKPSSLSFVEAAAAPLVLITAWESLYDRGKLQAGRKVLIHGGAGGVGH
VAIQLAKLQGAEVATTISSKEKSDFVKSLGTDLAIFKNEDFVKVVLDWTNGEGVDLAFDTIGGKVFYDTIPAVKVYGDLV
TILEPDTSLGNLKVARQRNLRIGLELMLTPMTKGLMEAQEDQAKILQQCRRLFDQGKLKIHVNRTFALDDAIEAHRILEA
GSMLGKIVLTI
>Mature_331_residues
MKAVVMISPGTPEVLQVQQVADPVIENDREVLIRLKAAGVNPIDTKLRTRGTLYPDKMPAILGCDGAGIVEAIGKNVQKF
QVGDEVYFCNSGIGAAPGNYAELAVVDERFVENKPSSLSFVEAAAAPLVLITAWESLYDRGKLQAGRKVLIHGGAGGVGH
VAIQLAKLQGAEVATTISSKEKSDFVKSLGTDLAIFKNEDFVKVVLDWTNGEGVDLAFDTIGGKVFYDTIPAVKVYGDLV
TILEPDTSLGNLKVARQRNLRIGLELMLTPMTKGLMEAQEDQAKILQQCRRLFDQGKLKIHVNRTFALDDAIEAHRILEA
GSMLGKIVLTI

Specific function: Unknown

COG id: COG0604

COG function: function code CR; NADPH:quinone reductase and related Zn-dependent oxidoreductases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the zinc-containing alcohol dehydrogenase family. Quinone oxidoreductase subfamily [H]

Homologues:

Organism=Homo sapiens, GI22538446, Length=344, Percent_Identity=29.3604651162791, Blast_Score=117, Evalue=1e-26,
Organism=Homo sapiens, GI22538444, Length=344, Percent_Identity=29.3604651162791, Blast_Score=117, Evalue=1e-26,
Organism=Homo sapiens, GI194239674, Length=334, Percent_Identity=27.2455089820359, Blast_Score=116, Evalue=3e-26,
Organism=Homo sapiens, GI13236495, Length=334, Percent_Identity=27.2455089820359, Blast_Score=116, Evalue=3e-26,
Organism=Homo sapiens, GI47519420, Length=363, Percent_Identity=30.0275482093664, Blast_Score=114, Evalue=2e-25,
Organism=Homo sapiens, GI194239676, Length=210, Percent_Identity=35.7142857142857, Blast_Score=111, Evalue=9e-25,
Organism=Homo sapiens, GI24308257, Length=354, Percent_Identity=27.4011299435028, Blast_Score=106, Evalue=4e-23,
Organism=Homo sapiens, GI28557745, Length=243, Percent_Identity=33.3333333333333, Blast_Score=100, Evalue=2e-21,
Organism=Homo sapiens, GI18379349, Length=322, Percent_Identity=27.3291925465839, Blast_Score=96, Evalue=4e-20,
Organism=Homo sapiens, GI41872631, Length=320, Percent_Identity=25.9375, Blast_Score=83, Evalue=4e-16,
Organism=Homo sapiens, GI90669511, Length=256, Percent_Identity=30.46875, Blast_Score=82, Evalue=6e-16,
Organism=Homo sapiens, GI67078404, Length=223, Percent_Identity=27.3542600896861, Blast_Score=69, Evalue=5e-12,
Organism=Homo sapiens, GI67078406, Length=216, Percent_Identity=27.7777777777778, Blast_Score=67, Evalue=3e-11,
Organism=Escherichia coli, GI1790485, Length=327, Percent_Identity=28.4403669724771, Blast_Score=119, Evalue=3e-28,
Organism=Caenorhabditis elegans, GI17507255, Length=190, Percent_Identity=35.2631578947368, Blast_Score=107, Evalue=8e-24,
Organism=Caenorhabditis elegans, GI71987554, Length=243, Percent_Identity=33.7448559670782, Blast_Score=106, Evalue=2e-23,
Organism=Caenorhabditis elegans, GI212642053, Length=241, Percent_Identity=31.1203319502075, Blast_Score=84, Evalue=7e-17,
Organism=Caenorhabditis elegans, GI17536829, Length=219, Percent_Identity=29.2237442922374, Blast_Score=69, Evalue=2e-12,
Organism=Saccharomyces cerevisiae, GI6319520, Length=335, Percent_Identity=30.1492537313433, Blast_Score=116, Evalue=6e-27,
Organism=Drosophila melanogaster, GI19920632, Length=243, Percent_Identity=26.3374485596708, Blast_Score=84, Evalue=2e-16,
Organism=Drosophila melanogaster, GI221330659, Length=243, Percent_Identity=26.3374485596708, Blast_Score=84, Evalue=2e-16,
Organism=Drosophila melanogaster, GI24581345, Length=229, Percent_Identity=25.3275109170306, Blast_Score=82, Evalue=4e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013149
- InterPro:   IPR013154
- InterPro:   IPR002085
- InterPro:   IPR011032
- InterPro:   IPR016040
- InterPro:   IPR002364 [H]

Pfam domain/function: PF08240 ADH_N; PF00107 ADH_zinc_N [H]

EC number: =1.6.5.5 [H]

Molecular weight: Translated: 35755; Mature: 35755

Theoretical pI: Translated: 5.80; Mature: 5.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKAVVMISPGTPEVLQVQQVADPVIENDREVLIRLKAAGVNPIDTKLRTRGTLYPDKMPA
CCEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHCCCCCCCCCCCE
ILGCDGAGIVEAIGKNVQKFQVGDEVYFCNSGIGAAPGNYAELAVVDERFVENKPSSLSF
EEECCCCHHHHHHCCCCEEEECCCEEEEECCCCCCCCCCCEEEEEEHHHHHCCCCCCCHH
VEAAAAPLVLITAWESLYDRGKLQAGRKVLIHGGAGGVGHVAIQLAKLQGAEVATTISSK
HHHHCCCEEEEEEHHHHHHCCCCCCCCEEEEECCCCCHHHHEEEEECCCCCEEEEECCCH
EKSDFVKSLGTDLAIFKNEDFVKVVLDWTNGEGVDLAFDTIGGKVFYDTIPAVKVYGDLV
HHHHHHHHCCCCEEEEECCCEEEEEEEECCCCCEEEEEECCCCEEEEECCCHHHHHCCEE
TILEPDTSLGNLKVARQRNLRIGLELMLTPMTKGLMEAQEDQAKILQQCRRLFDQGKLKI
EEECCCCCCCCEEEEECCCCEEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEE
HVNRTFALDDAIEAHRILEAGSMLGKIVLTI
EEEEEEECHHHHHHHHHHHHHHHHHEEEEEC
>Mature Secondary Structure
MKAVVMISPGTPEVLQVQQVADPVIENDREVLIRLKAAGVNPIDTKLRTRGTLYPDKMPA
CCEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHCCCCCCCCCCCE
ILGCDGAGIVEAIGKNVQKFQVGDEVYFCNSGIGAAPGNYAELAVVDERFVENKPSSLSF
EEECCCCHHHHHHCCCCEEEECCCEEEEECCCCCCCCCCCEEEEEEHHHHHCCCCCCCHH
VEAAAAPLVLITAWESLYDRGKLQAGRKVLIHGGAGGVGHVAIQLAKLQGAEVATTISSK
HHHHCCCEEEEEEHHHHHHCCCCCCCCEEEEECCCCCHHHHEEEEECCCCCEEEEECCCH
EKSDFVKSLGTDLAIFKNEDFVKVVLDWTNGEGVDLAFDTIGGKVFYDTIPAVKVYGDLV
HHHHHHHHCCCCEEEEECCCEEEEEEEECCCCCEEEEEECCCCEEEEECCCHHHHHCCEE
TILEPDTSLGNLKVARQRNLRIGLELMLTPMTKGLMEAQEDQAKILQQCRRLFDQGKLKI
EEECCCCCCCCEEEEECCCCEEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEE
HVNRTFALDDAIEAHRILEAGSMLGKIVLTI
EEEEEEECHHHHHHHHHHHHHHHHHEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]