| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is 113475476
Identifier: 113475476
GI number: 113475476
Start: 2757992
End: 2758780
Strand: Direct
Name: 113475476
Synonym: Tery_1807
Alternate gene names: NA
Gene position: 2757992-2758780 (Clockwise)
Preceding gene: 113475471
Following gene: 113475480
Centisome position: 35.59
GC content: 36.25
Gene sequence:
>789_bases ATGCAAGTGGCAAGTGGTAAAATTAGTTTTTTAAGACCAACTCCCTTTCAACCAGAATTACCTCTGTTTGTTTTCCTATG TGCTATGGATGGTACAGGTAAATTGTTGCGATCGCAAATCTCTAGCTTATCAACTGGTTTCGATATTCGATGTCTGAGTA TCCCACAAAATGATTTATCGACTTGGGAACAATTATCAGAGAAAACAATAAACCTAATTAAAATTGAACAAAAAGCAGCA CCTAAAAGACCTGTTTATTTATGTGGAGAATCATTTGGAGGGTGTTTAGCACTAAAAGTTGCCTTAAATACTCCTGAATT ATTGGACAAACTAATTTTAGTTAATTCAGCCACTTCATTTAGCCAACAACCTATAGTAAAATATGGATCATATCTCACCC AATATCTACCAAGCTATTTATATCAATTATCTGTAACAGCAACTCTACCCTTTTTAGGCGCTTTAGGTCGAATAAGACCA GAGGAGTGTCAAGCACTACTCAAAGCTATGCAGTCAGTTTCTCAGAAAACAGCTATCTGGCGGTTTGAACTAATGCGCTC ATTCCAGGTCAAGAAAAATCAACTAAAAAATTTCCCAAAATCTACATTAATTATTGCCAGCGCTGCAGACAGACTTTTAC CTTCAATATCACAAGCTAAGTTTTTAGTCAAATATTTGCCCAAAGCTGAAATGGTTATTCTCCCAAATAGTGGTCACGCC TGCTTACTAGAAGCAGACGTAGACCTTTATAAAATTATTCGAGACCAATGGGGCAGTAATTTGGTTTAA
Upstream 100 bases:
>100_bases GTCTCAATCTTGAGTATAAATTGAATAATAACTTACTTAGATATATCAACTGTTAGTTATTAATTTATCAATCATTACTA ATTTATATCTGTATTTAATC
Downstream 100 bases:
>100_bases CTAGGAACAGATAGAGTATCTGCTGAAATATTTAGTTTAAACTCAGCCACTTTTGAGCATTTAAACGTTGAGTTACACCG AACACCAATAACTTCAGAGT
Product: alpha/beta hydrolase fold protein
Products: NA
Alternate protein names: Alpha/Beta Hydrolase Fold Protein; Alpha/Beta Hydrolase Fold; Hydrolase Alpha/Beta Fold Family; Alpha/Beta Hydrolase Fold-Containing Protein
Number of amino acids: Translated: 262; Mature: 262
Protein sequence:
>262_residues MQVASGKISFLRPTPFQPELPLFVFLCAMDGTGKLLRSQISSLSTGFDIRCLSIPQNDLSTWEQLSEKTINLIKIEQKAA PKRPVYLCGESFGGCLALKVALNTPELLDKLILVNSATSFSQQPIVKYGSYLTQYLPSYLYQLSVTATLPFLGALGRIRP EECQALLKAMQSVSQKTAIWRFELMRSFQVKKNQLKNFPKSTLIIASAADRLLPSISQAKFLVKYLPKAEMVILPNSGHA CLLEADVDLYKIIRDQWGSNLV
Sequences:
>Translated_262_residues MQVASGKISFLRPTPFQPELPLFVFLCAMDGTGKLLRSQISSLSTGFDIRCLSIPQNDLSTWEQLSEKTINLIKIEQKAA PKRPVYLCGESFGGCLALKVALNTPELLDKLILVNSATSFSQQPIVKYGSYLTQYLPSYLYQLSVTATLPFLGALGRIRP EECQALLKAMQSVSQKTAIWRFELMRSFQVKKNQLKNFPKSTLIIASAADRLLPSISQAKFLVKYLPKAEMVILPNSGHA CLLEADVDLYKIIRDQWGSNLV >Mature_262_residues MQVASGKISFLRPTPFQPELPLFVFLCAMDGTGKLLRSQISSLSTGFDIRCLSIPQNDLSTWEQLSEKTINLIKIEQKAA PKRPVYLCGESFGGCLALKVALNTPELLDKLILVNSATSFSQQPIVKYGSYLTQYLPSYLYQLSVTATLPFLGALGRIRP EECQALLKAMQSVSQKTAIWRFELMRSFQVKKNQLKNFPKSTLIIASAADRLLPSISQAKFLVKYLPKAEMVILPNSGHA CLLEADVDLYKIIRDQWGSNLV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29208; Mature: 29208
Theoretical pI: Translated: 9.67; Mature: 9.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQVASGKISFLRPTPFQPELPLFVFLCAMDGTGKLLRSQISSLSTGFDIRCLSIPQNDLS CCCCCCCEEEECCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHCCCCCEEEEECCCHHHH TWEQLSEKTINLIKIEQKAAPKRPVYLCGESFGGCLALKVALNTPELLDKLILVNSATSF HHHHHHHHHHHHEEEEHHCCCCCCEEEECCCCCCEEEEEEECCCHHHHHHHHHHCCCCCC SQQPIVKYGSYLTQYLPSYLYQLSVTATLPFLGALGRIRPEECQALLKAMQSVSQKTAIW CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH RFELMRSFQVKKNQLKNFPKSTLIIASAADRLLPSISQAKFLVKYLPKAEMVILPNSGHA HHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHCCCHHHHHHHHHHCCCCCEEEEECCCCE CLLEADVDLYKIIRDQWGSNLV EEEECCHHHHHHHHHHCCCCCC >Mature Secondary Structure MQVASGKISFLRPTPFQPELPLFVFLCAMDGTGKLLRSQISSLSTGFDIRCLSIPQNDLS CCCCCCCEEEECCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHCCCCCEEEEECCCHHHH TWEQLSEKTINLIKIEQKAAPKRPVYLCGESFGGCLALKVALNTPELLDKLILVNSATSF HHHHHHHHHHHHEEEEHHCCCCCCEEEECCCCCCEEEEEEECCCHHHHHHHHHHCCCCCC SQQPIVKYGSYLTQYLPSYLYQLSVTATLPFLGALGRIRPEECQALLKAMQSVSQKTAIW CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH RFELMRSFQVKKNQLKNFPKSTLIIASAADRLLPSISQAKFLVKYLPKAEMVILPNSGHA HHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHCCCHHHHHHHHHHCCCCCEEEEECCCCE CLLEADVDLYKIIRDQWGSNLV EEEECCHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA