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The map label for this gene is gpsA [H]

Identifier: 113475480

GI number: 113475480

Start: 2761257

End: 2762255

Strand: Direct

Name: gpsA [H]

Synonym: Tery_1811

Alternate gene names: 113475480

Gene position: 2761257-2762255 (Clockwise)

Preceding gene: 113475476

Following gene: 113475481

Centisome position: 35.63

GC content: 33.13

Gene sequence:

>999_bases
ATGGTAGGTAAAATATCTCAAGCTGATAAAAGAAAGGAAGTTATTAGAACTCTAGAATCTGCTTATCCAATATCAACTGA
AAAAGCAAATTTAGCAATTCTAGGTGTAGGTGCATGGGGTTCTGCTTTAGCAGGATTAGTAAGTCATAATCAACATAAAA
TATCTTTATGGTCTCGTAACTTAAATATCAGTTTAGAACAGGTAATAAAAGATGTTGATATGATAGTTTCGGCAATTTCT
ATGAAAGGAGTTAATGAAACTATTGAGAAAATTCAAAAGATTGGTTTACCAAAAAAAGTAATTATTATTACTGCTACAAA
AGGATTAGATCCAGAAACAACTTGTACTCCTTCTCAGATTTGGGAAGCTAATTTTCCAAATAATCCTGTGGTAGTTTTAT
CCGGTCCTAATTTATCAAAAGAAATTGATGATAAATTACCAGCAGCAACAGTAGTTGCTAGTAAAAATATAGAAGCAGTA
ACGGCGGTACAAAATATTTTTGCTTCTGGTTTATTTCGAGTTTATAGTAGTTCCGATCCAATAGGTACAGAGTTAGGTGG
AACTTTAAAAAATGTCATTGCTATTGCTAGTGGAGTTTGTGATGGTTTGGAACTTGGTACTAATGCTAAATCAGCTTTAT
TAACTCGTGCTTTGACAGAAATTATTCGTATTGGTACTCATTTAGGCGGAAAAACTGAAACCTTTTTTGGGTTATCTGGT
TTGGGAGATATGTTGGCAACTTGTAGTAGTTCTTTGAGTAGAAATTATCGGGTTGGTTATGGTTTGGCGCAGGGAAAAAA
TTTGGAGGAAATTTTAGAGGAATTACCTGGTACTGCTGAAGGTGTTAATACTACAAATGTTTTGATTAATATTGCGAATA
GAGAGGAAATTTCTCTGCCTATTTCTAGTCAAGTTTTTTTATTGTTGAACGGTAAAATTACTCTAGAAGAAGCTGTGGAA
GCTCTAATGGGAAGAGATTTAAAATCAGAGTTTTATTGA

Upstream 100 bases:

>100_bases
TATTTCTTAAGAAAAATTAAACCTTTTTTTATACCAAATTTAAAAAAGATAGTTACAGTATTTGGCATCAAAACTCAGGA
ATAGGTAAAATCAATAAATT

Downstream 100 bases:

>100_bases
TTTTTAGATTACTCTTGAAAAAAAAGCCCAAACTATTGCAGATTAGTAATTAGTTTTTAGTTTTAATTGTTTGATTAAAC
AAATATTTGTGATATAAAGT

Product: NAD(P)H-dependent glycerol-3-phosphate dehydrogenase

Products: NA

Alternate protein names: NAD(P)H-dependent glycerol-3-phosphate dehydrogenase [H]

Number of amino acids: Translated: 332; Mature: 332

Protein sequence:

>332_residues
MVGKISQADKRKEVIRTLESAYPISTEKANLAILGVGAWGSALAGLVSHNQHKISLWSRNLNISLEQVIKDVDMIVSAIS
MKGVNETIEKIQKIGLPKKVIIITATKGLDPETTCTPSQIWEANFPNNPVVVLSGPNLSKEIDDKLPAATVVASKNIEAV
TAVQNIFASGLFRVYSSSDPIGTELGGTLKNVIAIASGVCDGLELGTNAKSALLTRALTEIIRIGTHLGGKTETFFGLSG
LGDMLATCSSSLSRNYRVGYGLAQGKNLEEILEELPGTAEGVNTTNVLINIANREEISLPISSQVFLLLNGKITLEEAVE
ALMGRDLKSEFY

Sequences:

>Translated_332_residues
MVGKISQADKRKEVIRTLESAYPISTEKANLAILGVGAWGSALAGLVSHNQHKISLWSRNLNISLEQVIKDVDMIVSAIS
MKGVNETIEKIQKIGLPKKVIIITATKGLDPETTCTPSQIWEANFPNNPVVVLSGPNLSKEIDDKLPAATVVASKNIEAV
TAVQNIFASGLFRVYSSSDPIGTELGGTLKNVIAIASGVCDGLELGTNAKSALLTRALTEIIRIGTHLGGKTETFFGLSG
LGDMLATCSSSLSRNYRVGYGLAQGKNLEEILEELPGTAEGVNTTNVLINIANREEISLPISSQVFLLLNGKITLEEAVE
ALMGRDLKSEFY
>Mature_332_residues
MVGKISQADKRKEVIRTLESAYPISTEKANLAILGVGAWGSALAGLVSHNQHKISLWSRNLNISLEQVIKDVDMIVSAIS
MKGVNETIEKIQKIGLPKKVIIITATKGLDPETTCTPSQIWEANFPNNPVVVLSGPNLSKEIDDKLPAATVVASKNIEAV
TAVQNIFASGLFRVYSSSDPIGTELGGTLKNVIAIASGVCDGLELGTNAKSALLTRALTEIIRIGTHLGGKTETFFGLSG
LGDMLATCSSSLSRNYRVGYGLAQGKNLEEILEELPGTAEGVNTTNVLINIANREEISLPISSQVFLLLNGKITLEEAVE
ALMGRDLKSEFY

Specific function: De novo phospholipid biosynthesis; glycerol-3 phosphate formation. [C]

COG id: COG0240

COG function: function code C; Glycerol-3-phosphate dehydrogenase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI24307999, Length=290, Percent_Identity=26.8965517241379, Blast_Score=96, Evalue=6e-20,
Organism=Homo sapiens, GI33695088, Length=290, Percent_Identity=23.448275862069, Blast_Score=74, Evalue=2e-13,
Organism=Escherichia coli, GI1790037, Length=336, Percent_Identity=32.1428571428571, Blast_Score=170, Evalue=1e-43,
Organism=Caenorhabditis elegans, GI193210134, Length=305, Percent_Identity=27.2131147540984, Blast_Score=81, Evalue=7e-16,
Organism=Caenorhabditis elegans, GI193210136, Length=205, Percent_Identity=30.7317073170732, Blast_Score=80, Evalue=2e-15,
Organism=Caenorhabditis elegans, GI32564403, Length=205, Percent_Identity=30.7317073170732, Blast_Score=80, Evalue=2e-15,
Organism=Caenorhabditis elegans, GI32564399, Length=205, Percent_Identity=30.7317073170732, Blast_Score=80, Evalue=2e-15,
Organism=Caenorhabditis elegans, GI17507425, Length=352, Percent_Identity=22.7272727272727, Blast_Score=76, Evalue=3e-14,
Organism=Saccharomyces cerevisiae, GI6324513, Length=216, Percent_Identity=28.2407407407407, Blast_Score=67, Evalue=4e-12,
Organism=Drosophila melanogaster, GI17136200, Length=314, Percent_Identity=27.3885350318471, Blast_Score=87, Evalue=1e-17,
Organism=Drosophila melanogaster, GI17136204, Length=314, Percent_Identity=27.3885350318471, Blast_Score=87, Evalue=1e-17,
Organism=Drosophila melanogaster, GI17136202, Length=314, Percent_Identity=27.3885350318471, Blast_Score=87, Evalue=1e-17,
Organism=Drosophila melanogaster, GI22026922, Length=201, Percent_Identity=28.3582089552239, Blast_Score=84, Evalue=2e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008927
- InterPro:   IPR013328
- InterPro:   IPR006168
- InterPro:   IPR006109
- InterPro:   IPR011128
- InterPro:   IPR016040 [H]

Pfam domain/function: PF07479 NAD_Gly3P_dh_C; PF01210 NAD_Gly3P_dh_N [H]

EC number: =1.1.1.94 [H]

Molecular weight: Translated: 35419; Mature: 35419

Theoretical pI: Translated: 5.48; Mature: 5.48

Prosite motif: PS00957 NAD_G3PDH

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVGKISQADKRKEVIRTLESAYPISTEKANLAILGVGAWGSALAGLVSHNQHKISLWSRN
CCCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCHHHHHHHHHHCCCEEEEEEECC
LNISLEQVIKDVDMIVSAISMKGVNETIEKIQKIGLPKKVIIITATKGLDPETTCTPSQI
CCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCHHHH
WEANFPNNPVVVLSGPNLSKEIDDKLPAATVVASKNIEAVTAVQNIFASGLFRVYSSSDP
EECCCCCCCEEEEECCCCCHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCC
IGTELGGTLKNVIAIASGVCDGLELGTNAKSALLTRALTEIIRIGTHLGGKTETFFGLSG
CCHHHHHHHHHHHHHHHHCCCCHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEECHHH
LGDMLATCSSSLSRNYRVGYGLAQGKNLEEILEELPGTAEGVNTTNVLINIANREEISLP
HHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHCCCCCCCCCCEEEEEEECCCCEEECC
ISSQVFLLLNGKITLEEAVEALMGRDLKSEFY
CCCEEEEEEECCEEHHHHHHHHHCCCHHHCCC
>Mature Secondary Structure
MVGKISQADKRKEVIRTLESAYPISTEKANLAILGVGAWGSALAGLVSHNQHKISLWSRN
CCCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCHHHHHHHHHHCCCEEEEEEECC
LNISLEQVIKDVDMIVSAISMKGVNETIEKIQKIGLPKKVIIITATKGLDPETTCTPSQI
CCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCHHHH
WEANFPNNPVVVLSGPNLSKEIDDKLPAATVVASKNIEAVTAVQNIFASGLFRVYSSSDP
EECCCCCCCEEEEECCCCCHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCC
IGTELGGTLKNVIAIASGVCDGLELGTNAKSALLTRALTEIIRIGTHLGGKTETFFGLSG
CCHHHHHHHHHHHHHHHHCCCCHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEECHHH
LGDMLATCSSSLSRNYRVGYGLAQGKNLEEILEELPGTAEGVNTTNVLINIANREEISLP
HHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHCCCCCCCCCCEEEEEEECCCCEEECC
ISSQVFLLLNGKITLEEAVEALMGRDLKSEFY
CCCEEEEEEECCEEHHHHHHHHHCCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA