Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113475391

Identifier: 113475391

GI number: 113475391

Start: 2608439

End: 2609413

Strand: Direct

Name: 113475391

Synonym: Tery_1715

Alternate gene names: NA

Gene position: 2608439-2609413 (Clockwise)

Preceding gene: 113475390

Following gene: 113475399

Centisome position: 33.66

GC content: 32.51

Gene sequence:

>975_bases
ATGAGCCATAAACGGATTTTTATCACGGGCGCTAGTGGATGTATTGGTCACTATATTGTTGAATCTTTAATTCAAAATAC
CCACCACGAACTTTACTTATTAGTTAGGAACCCAGATAAATTAAAAGTTGATTATAAAGCTCGTCCAGGTGTTAATCTTT
TAAAAGCAAATCTGAGAGAAATTGAGCAATTTTCATCTTTACTTCCAGAAATTAATGTAGCAATTTTAGCTGCCACTGCT
TGGGGAAATTTGCAGGAAGTATTTGATATTAATGTGATTAAAACTCTGAAGTTAATCACATTACTCAATCCTGAAGTATG
TGAAAATATAATCTATTTTTCAACTGCCAGTATTCTTGACCAAAATAATAGATTGCTCACAAAAGCTGGAGAGATAGGTA
CTGACTATATTCGTTCTAAGTATGACTGTATGTATCAGTTATCCCAACTGGATAATTTACCTCCTCTAACCTGTCTTTTT
CCTACATTGGTTTTAGGAGGAGATCAGGAAAAACCTTATTCTCATCTCTCTGCTGGTTTACCAGAAATAATTAAACATAT
TGGTTTAATTCGATGGTTAAAAGTTGATGGTAGTTTCCATTTTATTCACGCTGCTGATATTGCTCAAGTAGTTAGTTATT
TAGTCGAACATCCACCACATTCAAAAGAATTACAAAAGTTAATTTTAGGTAATCCAAAAGTTACAGTAAATCAGGTTGTT
GAAGAAATTTGTGCATATCTGAAGAAACGAATATTTTTTCGTTTTAATTTAGCTCCTTGGTTGATCGAGGTAATAATTTC
GGTATTTAAAATTCAAGTAGCAGCTTGGGATAGGTTCTGTTTAGAATATCGCCATTTTACATATCAAAATCCTATTAACC
CTGCTAGTTTTAAACTGCCGAGTTATTGTCCTGCTATCCCTGATATTTTGAGAACTAGAAATTTGAAATTCTCACCCTTA
AATCAAAAATTATAA

Upstream 100 bases:

>100_bases
AATTTATTAGTAAGCATTCAACCGAATGCTTACCATAACAGAGAATTAGATTTTAGTAAGAACTAACAACTAATAACTGA
TAACTGATTAACTGATTTGT

Downstream 100 bases:

>100_bases
TGGGAGTAATGGGTGGAATTTATGATAGTTGAAGTCAGCTCTCTCCTTACTCTGCTTATGACTAGAGATTTACAGTGCAA
GAATAACAACAGCAGTAATA

Product: NAD-dependent epimerase/dehydratase

Products: NA

Alternate protein names: Nucleoside-Diphosphate-Sugar Epimerase; NAD-Dependent Epimerase/Dehydratase Family Protein; NAD Dependent Epimerase/Dehydratase; NmrA Family Protein; NAD Dependent Epimerase/Dehydratase Family; Nucleoside-Diphosphate-Sugar Epimerases

Number of amino acids: Translated: 324; Mature: 323

Protein sequence:

>324_residues
MSHKRIFITGASGCIGHYIVESLIQNTHHELYLLVRNPDKLKVDYKARPGVNLLKANLREIEQFSSLLPEINVAILAATA
WGNLQEVFDINVIKTLKLITLLNPEVCENIIYFSTASILDQNNRLLTKAGEIGTDYIRSKYDCMYQLSQLDNLPPLTCLF
PTLVLGGDQEKPYSHLSAGLPEIIKHIGLIRWLKVDGSFHFIHAADIAQVVSYLVEHPPHSKELQKLILGNPKVTVNQVV
EEICAYLKKRIFFRFNLAPWLIEVIISVFKIQVAAWDRFCLEYRHFTYQNPINPASFKLPSYCPAIPDILRTRNLKFSPL
NQKL

Sequences:

>Translated_324_residues
MSHKRIFITGASGCIGHYIVESLIQNTHHELYLLVRNPDKLKVDYKARPGVNLLKANLREIEQFSSLLPEINVAILAATA
WGNLQEVFDINVIKTLKLITLLNPEVCENIIYFSTASILDQNNRLLTKAGEIGTDYIRSKYDCMYQLSQLDNLPPLTCLF
PTLVLGGDQEKPYSHLSAGLPEIIKHIGLIRWLKVDGSFHFIHAADIAQVVSYLVEHPPHSKELQKLILGNPKVTVNQVV
EEICAYLKKRIFFRFNLAPWLIEVIISVFKIQVAAWDRFCLEYRHFTYQNPINPASFKLPSYCPAIPDILRTRNLKFSPL
NQKL
>Mature_323_residues
SHKRIFITGASGCIGHYIVESLIQNTHHELYLLVRNPDKLKVDYKARPGVNLLKANLREIEQFSSLLPEINVAILAATAW
GNLQEVFDINVIKTLKLITLLNPEVCENIIYFSTASILDQNNRLLTKAGEIGTDYIRSKYDCMYQLSQLDNLPPLTCLFP
TLVLGGDQEKPYSHLSAGLPEIIKHIGLIRWLKVDGSFHFIHAADIAQVVSYLVEHPPHSKELQKLILGNPKVTVNQVVE
EICAYLKKRIFFRFNLAPWLIEVIISVFKIQVAAWDRFCLEYRHFTYQNPINPASFKLPSYCPAIPDILRTRNLKFSPLN
QKL

Specific function: Unknown

COG id: COG0451

COG function: function code MG; Nucleoside-diphosphate-sugar epimerases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 37006; Mature: 36875

Theoretical pI: Translated: 8.63; Mature: 8.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
0.3 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSHKRIFITGASGCIGHYIVESLIQNTHHELYLLVRNPDKLKVDYKARPGVNLLKANLRE
CCCCEEEEECCCHHHHHHHHHHHHHCCCCEEEEEEECCCCEEEEEECCCCHHHHHHHHHH
IEQFSSLLPEINVAILAATAWGNLQEVFDINVIKTLKLITLLNPEVCENIIYFSTASILD
HHHHHHHCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHC
QNNRLLTKAGEIGTDYIRSKYDCMYQLSQLDNLPPLTCLFPTLVLGGDQEKPYSHLSAGL
CCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCHHHHHCCH
PEIIKHIGLIRWLKVDGSFHFIHAADIAQVVSYLVEHPPHSKELQKLILGNPKVTVNQVV
HHHHHHHCCEEEEEECCCEEEEEHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCEEHHHHH
EEICAYLKKRIFFRFNLAPWLIEVIISVFKIQVAAWDRFCLEYRHFTYQNPINPASFKLP
HHHHHHHHHHHHEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
SYCPAIPDILRTRNLKFSPLNQKL
CCCCHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure 
SHKRIFITGASGCIGHYIVESLIQNTHHELYLLVRNPDKLKVDYKARPGVNLLKANLRE
CCCEEEEECCCHHHHHHHHHHHHHCCCCEEEEEEECCCCEEEEEECCCCHHHHHHHHHH
IEQFSSLLPEINVAILAATAWGNLQEVFDINVIKTLKLITLLNPEVCENIIYFSTASILD
HHHHHHHCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHC
QNNRLLTKAGEIGTDYIRSKYDCMYQLSQLDNLPPLTCLFPTLVLGGDQEKPYSHLSAGL
CCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCHHHHHCCH
PEIIKHIGLIRWLKVDGSFHFIHAADIAQVVSYLVEHPPHSKELQKLILGNPKVTVNQVV
HHHHHHHCCEEEEEECCCEEEEEHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCEEHHHHH
EEICAYLKKRIFFRFNLAPWLIEVIISVFKIQVAAWDRFCLEYRHFTYQNPINPASFKLP
HHHHHHHHHHHHEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
SYCPAIPDILRTRNLKFSPLNQKL
CCCCHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA