Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113475383

Identifier: 113475383

GI number: 113475383

Start: 2594470

End: 2596161

Strand: Reverse

Name: 113475383

Synonym: Tery_1706

Alternate gene names: NA

Gene position: 2596161-2594470 (Counterclockwise)

Preceding gene: 113475384

Following gene: 113475382

Centisome position: 33.5

GC content: 30.44

Gene sequence:

>1692_bases
ATGGTTGAATTATTCCAGCTAATTCCATTTCCATTGCTTATCTTGAGTATAGTATTGGTAATCTTTCCCACTATATTTAC
TGCCATAGTGCGTATCCGACTCTACAATTATTTAATATATTTAAATGATAAAGTTAGAAGACTAATTCGCGAGATAAGTC
CAGGACGAAAACCTAAAATAATTGAATATTTAGAGGCAAGATTTTCCATAGCAAGTAAAAATTTAGAAGAAGTTAATACA
GCAGCATTAGTAGATGGAATTTATAGCCAAGAAAAATTTGATTTTTTAGGATTTCCATTACGATGCCATCAATGGGATTA
CTTTTCTCAAGCATTACCTAACCTATTAATATCCTTTGGAATATTAGGCACTTTTCTTGGAATAGTCATTAACTTATCAA
GCTTAATTCAAACAATTAATCAAGTTAAAGCAACTGATATAAATAACTTAGTCGAGCAATTACAAGACCCTATCCAAGGT
ATGGGAATTGCTTTTATTACTAGCTTAATTGCTGTAGCTTGTAGTTCCTTATTAACAGTAATTAACCTTAAATGGAATAC
TAATTTGGCAAGAGAAGATTTAATCAGCTATTTAGAAGATTACCTCGATAATATTTTACAACCAAAAATAGAAGGTAATA
CTAGACTTGATAAGGCTGTTAACCGCATGGTAGAACAGCAAAATTACTTCTTAAATAGATTTCATCAAAATGTAACAAAT
GCAGTGGAATCATCCTTGGGAAAAATAGCAAGAGAAATTTCCGAAGGTAACAAAGAAGCGGCTGATATCGCTAAACAAGT
TTATACAAGATTTACTGAATCTTCTGGGACAATATCTAATGCAGCAGGTAGATTTGAATCAGTTGTTAATAACTTTCAAA
ATATTATTGCTGATGAGATGAAACCTACAGTAAAAGAATTTAAGGAGGCATCTAAAACATTTCAACAAAGTCAATTTCCT
AAAAAATTATCAGAAGCTACTCAAAATTTAGCTACCATGCAACAAAATTTTTCTAGCTCAACTTCTGCTTTACAAGAAAC
AGTAAACGATATTAAAGAATCATCGAATAAAAACAGTCAGACTCTAGGAAGTTTAACAGCAGAAATTATCAACTTTAATC
AAAACTATCGTGAGGTATTTGAATTACATAAAATCAATCAAAAATCTCTTCAAAATATTATTCCTAAACTTAACGAAGGA
GCAAATAATTTTAAGTCGGCTTCCCAAATAATTCAAAGCCTACAGAATGAGATTAAGGTTAGAGAAGAAAGTCTGGTAAA
TATACAATCAGAGCTAGCTAATATTGTAAAAACATTGAAAGCAAATTCCCAAGAAGTCAATACAGAAATTCAAAATTTTG
GTAACAAGCTAATTGATAACGTAGCCCAAAAAGTAGATATTAATAACCAGGAAATTCAGAAGGTATTGGAAAAATTTCAG
GTATCTATTACAAGTTTAGATAATTTAGGCGATCGCTTGACTAATACTTTAGTTGAACAGGTAGGTAACAATAGTCAAGA
AATTAGGACACTTAGAGGAAAAATTGAAGAATCTGTAGATTATCTGAGTCAGATAAAAAACAAGTTTGAAAAGTTAGAAT
CAAACTTACAATTGCAATTCCAATCTTCAAGTAATACTACTGAATTTAAAGACTCTCAATTAGAAGCAAATTCCAGGAGA
AAGTCTATTTAG

Upstream 100 bases:

>100_bases
ACTAAGAAATGCTATATTTGATGTGATTTACCACAAAATTATAATTTTTAGTGGCAAATAAAAAAAAGATTTATGGATTT
AATCTAAAGGAGTTTTAATT

Downstream 100 bases:

>100_bases
AAATTGGGATAAAATATGAACCACAAATATTGGCGCTTTAGTATCCCACTGAAATGCTCCTATGGAAGAATTCTGGAAGT
TAATAAGTCCTCATTACTTA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 563; Mature: 563

Protein sequence:

>563_residues
MVELFQLIPFPLLILSIVLVIFPTIFTAIVRIRLYNYLIYLNDKVRRLIREISPGRKPKIIEYLEARFSIASKNLEEVNT
AALVDGIYSQEKFDFLGFPLRCHQWDYFSQALPNLLISFGILGTFLGIVINLSSLIQTINQVKATDINNLVEQLQDPIQG
MGIAFITSLIAVACSSLLTVINLKWNTNLAREDLISYLEDYLDNILQPKIEGNTRLDKAVNRMVEQQNYFLNRFHQNVTN
AVESSLGKIAREISEGNKEAADIAKQVYTRFTESSGTISNAAGRFESVVNNFQNIIADEMKPTVKEFKEASKTFQQSQFP
KKLSEATQNLATMQQNFSSSTSALQETVNDIKESSNKNSQTLGSLTAEIINFNQNYREVFELHKINQKSLQNIIPKLNEG
ANNFKSASQIIQSLQNEIKVREESLVNIQSELANIVKTLKANSQEVNTEIQNFGNKLIDNVAQKVDINNQEIQKVLEKFQ
VSITSLDNLGDRLTNTLVEQVGNNSQEIRTLRGKIEESVDYLSQIKNKFEKLESNLQLQFQSSSNTTEFKDSQLEANSRR
KSI

Sequences:

>Translated_563_residues
MVELFQLIPFPLLILSIVLVIFPTIFTAIVRIRLYNYLIYLNDKVRRLIREISPGRKPKIIEYLEARFSIASKNLEEVNT
AALVDGIYSQEKFDFLGFPLRCHQWDYFSQALPNLLISFGILGTFLGIVINLSSLIQTINQVKATDINNLVEQLQDPIQG
MGIAFITSLIAVACSSLLTVINLKWNTNLAREDLISYLEDYLDNILQPKIEGNTRLDKAVNRMVEQQNYFLNRFHQNVTN
AVESSLGKIAREISEGNKEAADIAKQVYTRFTESSGTISNAAGRFESVVNNFQNIIADEMKPTVKEFKEASKTFQQSQFP
KKLSEATQNLATMQQNFSSSTSALQETVNDIKESSNKNSQTLGSLTAEIINFNQNYREVFELHKINQKSLQNIIPKLNEG
ANNFKSASQIIQSLQNEIKVREESLVNIQSELANIVKTLKANSQEVNTEIQNFGNKLIDNVAQKVDINNQEIQKVLEKFQ
VSITSLDNLGDRLTNTLVEQVGNNSQEIRTLRGKIEESVDYLSQIKNKFEKLESNLQLQFQSSSNTTEFKDSQLEANSRR
KSI
>Mature_563_residues
MVELFQLIPFPLLILSIVLVIFPTIFTAIVRIRLYNYLIYLNDKVRRLIREISPGRKPKIIEYLEARFSIASKNLEEVNT
AALVDGIYSQEKFDFLGFPLRCHQWDYFSQALPNLLISFGILGTFLGIVINLSSLIQTINQVKATDINNLVEQLQDPIQG
MGIAFITSLIAVACSSLLTVINLKWNTNLAREDLISYLEDYLDNILQPKIEGNTRLDKAVNRMVEQQNYFLNRFHQNVTN
AVESSLGKIAREISEGNKEAADIAKQVYTRFTESSGTISNAAGRFESVVNNFQNIIADEMKPTVKEFKEASKTFQQSQFP
KKLSEATQNLATMQQNFSSSTSALQETVNDIKESSNKNSQTLGSLTAEIINFNQNYREVFELHKINQKSLQNIIPKLNEG
ANNFKSASQIIQSLQNEIKVREESLVNIQSELANIVKTLKANSQEVNTEIQNFGNKLIDNVAQKVDINNQEIQKVLEKFQ
VSITSLDNLGDRLTNTLVEQVGNNSQEIRTLRGKIEESVDYLSQIKNKFEKLESNLQLQFQSSSNTTEFKDSQLEANSRR
KSI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 63847; Mature: 63847

Theoretical pI: Translated: 5.69; Mature: 5.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVELFQLIPFPLLILSIVLVIFPTIFTAIVRIRLYNYLIYLNDKVRRLIREISPGRKPKI
CCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCHH
IEYLEARFSIASKNLEEVNTAALVDGIYSQEKFDFLGFPLRCHQWDYFSQALPNLLISFG
HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCHHHHHHHHHHHHHHHH
ILGTFLGIVINLSSLIQTINQVKATDINNLVEQLQDPIQGMGIAFITSLIAVACSSLLTV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
INLKWNTNLAREDLISYLEDYLDNILQPKIEGNTRLDKAVNRMVEQQNYFLNRFHQNVTN
HHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
AVESSLGKIAREISEGNKEAADIAKQVYTRFTESSGTISNAAGRFESVVNNFQNIIADEM
HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH
KPTVKEFKEASKTFQQSQFPKKLSEATQNLATMQQNFSSSTSALQETVNDIKESSNKNSQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCHH
TLGSLTAEIINFNQNYREVFELHKINQKSLQNIIPKLNEGANNFKSASQIIQSLQNEIKV
HHHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
REESLVNIQSELANIVKTLKANSQEVNTEIQNFGNKLIDNVAQKVDINNQEIQKVLEKFQ
HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
VSITSLDNLGDRLTNTLVEQVGNNSQEIRTLRGKIEESVDYLSQIKNKFEKLESNLQLQF
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEE
QSSSNTTEFKDSQLEANSRRKSI
CCCCCCCHHCHHHHHHHHHCCCC
>Mature Secondary Structure
MVELFQLIPFPLLILSIVLVIFPTIFTAIVRIRLYNYLIYLNDKVRRLIREISPGRKPKI
CCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCHH
IEYLEARFSIASKNLEEVNTAALVDGIYSQEKFDFLGFPLRCHQWDYFSQALPNLLISFG
HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCHHHHHHHHHHHHHHHH
ILGTFLGIVINLSSLIQTINQVKATDINNLVEQLQDPIQGMGIAFITSLIAVACSSLLTV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
INLKWNTNLAREDLISYLEDYLDNILQPKIEGNTRLDKAVNRMVEQQNYFLNRFHQNVTN
HHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
AVESSLGKIAREISEGNKEAADIAKQVYTRFTESSGTISNAAGRFESVVNNFQNIIADEM
HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH
KPTVKEFKEASKTFQQSQFPKKLSEATQNLATMQQNFSSSTSALQETVNDIKESSNKNSQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCHH
TLGSLTAEIINFNQNYREVFELHKINQKSLQNIIPKLNEGANNFKSASQIIQSLQNEIKV
HHHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
REESLVNIQSELANIVKTLKANSQEVNTEIQNFGNKLIDNVAQKVDINNQEIQKVLEKFQ
HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
VSITSLDNLGDRLTNTLVEQVGNNSQEIRTLRGKIEESVDYLSQIKNKFEKLESNLQLQF
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEE
QSSSNTTEFKDSQLEANSRRKSI
CCCCCCCHHCHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA