| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is 113475382
Identifier: 113475382
GI number: 113475382
Start: 2593406
End: 2594197
Strand: Reverse
Name: 113475382
Synonym: Tery_1705
Alternate gene names: NA
Gene position: 2594197-2593406 (Counterclockwise)
Preceding gene: 113475383
Following gene: 113475381
Centisome position: 33.47
GC content: 33.08
Gene sequence:
>792_bases ATGAGTCGCCGTTTACGATATTCAAGGTTAAATCAAGCTCTCAATGTCTGGCAATCTTTTACAGATGTGATGTCGAGCGC TTTTATGATTTTGAGCTTATTTTTGTTCCTAGCATTACTTAAATCAGGAGTTGTAAATTCAGATATTTCCAGAGTCAATA CTGAACTTAAATTAGTAAAAATAGAGAATAAAAAATTGCAGGATAAAGTCAAAGAAAAAGACAAAGAAATACAGGAAAAA TCTGAAAAGATAAAGCAACAAGAAAAGACTATCAAGAGAAAAAATGAAGAAATTTCTAGCTTAACATCCCAACCACCAAT TGAAATTACAGAAGTATCTAATCGTAAATTTCCATCAGGTAGTGCCGAATTGTCTGATGGGTTAGTTAATTTTATTGAGA ACAATTTAGTGAAGCAAATCGAAAATTATGCTCAAGGGAAAGAAGGTTATATCGTACAAGTAATTGGTCATACTGATGGC CAAAAAAATAATCGTTTTCAAGTAAGTAATTTAGATAATCTTTTAGAAGAAGTTGCTCGTGTTAATAACAATATAAATAT TAGTAATCTCACCCCAAGTTCTAATGCAGATTTAGGTTTAATGCGAGCTTTAGCAGTAGTAAAAGAACTTGAAAAAAACC CTCGTTTAAAGCAACTAGAATTAAAATTCCGAGCTTATTCAGCAGCACAACTTTATCTACCTTCAGGAGAATATGCGGGA GTACAGCGCTATCCAGATCCTCAGAGAAGGCGTATAGAAATTCGTTTCAGTCCTCCTGCTGACAAAAAATAG
Upstream 100 bases:
>100_bases ATAATATGGTTATAATTTTGGTAAATACCCATAGGTTTTAAACCACTATTTAATTACCAAAACTTTTTGATTTTTTCAGA TCAATAAAGAAGTAAAAATT
Downstream 100 bases:
>100_bases ATCTCGTGAACTTGAAATCATAGTATTTGAATAAATTTTTGCTACAATTCGAGGATTATTTTACCAAAAAATGAGATATA AAGCCTACCCTTTTAAAGGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 263; Mature: 262
Protein sequence:
>263_residues MSRRLRYSRLNQALNVWQSFTDVMSSAFMILSLFLFLALLKSGVVNSDISRVNTELKLVKIENKKLQDKVKEKDKEIQEK SEKIKQQEKTIKRKNEEISSLTSQPPIEITEVSNRKFPSGSAELSDGLVNFIENNLVKQIENYAQGKEGYIVQVIGHTDG QKNNRFQVSNLDNLLEEVARVNNNINISNLTPSSNADLGLMRALAVVKELEKNPRLKQLELKFRAYSAAQLYLPSGEYAG VQRYPDPQRRRIEIRFSPPADKK
Sequences:
>Translated_263_residues MSRRLRYSRLNQALNVWQSFTDVMSSAFMILSLFLFLALLKSGVVNSDISRVNTELKLVKIENKKLQDKVKEKDKEIQEK SEKIKQQEKTIKRKNEEISSLTSQPPIEITEVSNRKFPSGSAELSDGLVNFIENNLVKQIENYAQGKEGYIVQVIGHTDG QKNNRFQVSNLDNLLEEVARVNNNINISNLTPSSNADLGLMRALAVVKELEKNPRLKQLELKFRAYSAAQLYLPSGEYAG VQRYPDPQRRRIEIRFSPPADKK >Mature_262_residues SRRLRYSRLNQALNVWQSFTDVMSSAFMILSLFLFLALLKSGVVNSDISRVNTELKLVKIENKKLQDKVKEKDKEIQEKS EKIKQQEKTIKRKNEEISSLTSQPPIEITEVSNRKFPSGSAELSDGLVNFIENNLVKQIENYAQGKEGYIVQVIGHTDGQ KNNRFQVSNLDNLLEEVARVNNNINISNLTPSSNADLGLMRALAVVKELEKNPRLKQLELKFRAYSAAQLYLPSGEYAGV QRYPDPQRRRIEIRFSPPADKK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30069; Mature: 29938
Theoretical pI: Translated: 10.20; Mature: 10.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRRLRYSRLNQALNVWQSFTDVMSSAFMILSLFLFLALLKSGVVNSDISRVNTELKLVK CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCEEEEEE IENKKLQDKVKEKDKEIQEKSEKIKQQEKTIKRKNEEISSLTSQPPIEITEVSNRKFPSG ECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCC SAELSDGLVNFIENNLVKQIENYAQGKEGYIVQVIGHTDGQKNNRFQVSNLDNLLEEVAR CHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCEEHHHHHHHHHHHHH VNNNINISNLTPSSNADLGLMRALAVVKELEKNPRLKQLELKFRAYSAAQLYLPSGEYAG HCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCEEEEECCCCCCCC VQRYPDPQRRRIEIRFSPPADKK CCCCCCCCCCEEEEEECCCCCCC >Mature Secondary Structure SRRLRYSRLNQALNVWQSFTDVMSSAFMILSLFLFLALLKSGVVNSDISRVNTELKLVK CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCEEEEEE IENKKLQDKVKEKDKEIQEKSEKIKQQEKTIKRKNEEISSLTSQPPIEITEVSNRKFPSG ECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCC SAELSDGLVNFIENNLVKQIENYAQGKEGYIVQVIGHTDGQKNNRFQVSNLDNLLEEVAR CHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCEEHHHHHHHHHHHHH VNNNINISNLTPSSNADLGLMRALAVVKELEKNPRLKQLELKFRAYSAAQLYLPSGEYAG HCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCEEEEECCCCCCCC VQRYPDPQRRRIEIRFSPPADKK CCCCCCCCCCEEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA