Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113475382

Identifier: 113475382

GI number: 113475382

Start: 2593406

End: 2594197

Strand: Reverse

Name: 113475382

Synonym: Tery_1705

Alternate gene names: NA

Gene position: 2594197-2593406 (Counterclockwise)

Preceding gene: 113475383

Following gene: 113475381

Centisome position: 33.47

GC content: 33.08

Gene sequence:

>792_bases
ATGAGTCGCCGTTTACGATATTCAAGGTTAAATCAAGCTCTCAATGTCTGGCAATCTTTTACAGATGTGATGTCGAGCGC
TTTTATGATTTTGAGCTTATTTTTGTTCCTAGCATTACTTAAATCAGGAGTTGTAAATTCAGATATTTCCAGAGTCAATA
CTGAACTTAAATTAGTAAAAATAGAGAATAAAAAATTGCAGGATAAAGTCAAAGAAAAAGACAAAGAAATACAGGAAAAA
TCTGAAAAGATAAAGCAACAAGAAAAGACTATCAAGAGAAAAAATGAAGAAATTTCTAGCTTAACATCCCAACCACCAAT
TGAAATTACAGAAGTATCTAATCGTAAATTTCCATCAGGTAGTGCCGAATTGTCTGATGGGTTAGTTAATTTTATTGAGA
ACAATTTAGTGAAGCAAATCGAAAATTATGCTCAAGGGAAAGAAGGTTATATCGTACAAGTAATTGGTCATACTGATGGC
CAAAAAAATAATCGTTTTCAAGTAAGTAATTTAGATAATCTTTTAGAAGAAGTTGCTCGTGTTAATAACAATATAAATAT
TAGTAATCTCACCCCAAGTTCTAATGCAGATTTAGGTTTAATGCGAGCTTTAGCAGTAGTAAAAGAACTTGAAAAAAACC
CTCGTTTAAAGCAACTAGAATTAAAATTCCGAGCTTATTCAGCAGCACAACTTTATCTACCTTCAGGAGAATATGCGGGA
GTACAGCGCTATCCAGATCCTCAGAGAAGGCGTATAGAAATTCGTTTCAGTCCTCCTGCTGACAAAAAATAG

Upstream 100 bases:

>100_bases
ATAATATGGTTATAATTTTGGTAAATACCCATAGGTTTTAAACCACTATTTAATTACCAAAACTTTTTGATTTTTTCAGA
TCAATAAAGAAGTAAAAATT

Downstream 100 bases:

>100_bases
ATCTCGTGAACTTGAAATCATAGTATTTGAATAAATTTTTGCTACAATTCGAGGATTATTTTACCAAAAAATGAGATATA
AAGCCTACCCTTTTAAAGGG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 263; Mature: 262

Protein sequence:

>263_residues
MSRRLRYSRLNQALNVWQSFTDVMSSAFMILSLFLFLALLKSGVVNSDISRVNTELKLVKIENKKLQDKVKEKDKEIQEK
SEKIKQQEKTIKRKNEEISSLTSQPPIEITEVSNRKFPSGSAELSDGLVNFIENNLVKQIENYAQGKEGYIVQVIGHTDG
QKNNRFQVSNLDNLLEEVARVNNNINISNLTPSSNADLGLMRALAVVKELEKNPRLKQLELKFRAYSAAQLYLPSGEYAG
VQRYPDPQRRRIEIRFSPPADKK

Sequences:

>Translated_263_residues
MSRRLRYSRLNQALNVWQSFTDVMSSAFMILSLFLFLALLKSGVVNSDISRVNTELKLVKIENKKLQDKVKEKDKEIQEK
SEKIKQQEKTIKRKNEEISSLTSQPPIEITEVSNRKFPSGSAELSDGLVNFIENNLVKQIENYAQGKEGYIVQVIGHTDG
QKNNRFQVSNLDNLLEEVARVNNNINISNLTPSSNADLGLMRALAVVKELEKNPRLKQLELKFRAYSAAQLYLPSGEYAG
VQRYPDPQRRRIEIRFSPPADKK
>Mature_262_residues
SRRLRYSRLNQALNVWQSFTDVMSSAFMILSLFLFLALLKSGVVNSDISRVNTELKLVKIENKKLQDKVKEKDKEIQEKS
EKIKQQEKTIKRKNEEISSLTSQPPIEITEVSNRKFPSGSAELSDGLVNFIENNLVKQIENYAQGKEGYIVQVIGHTDGQ
KNNRFQVSNLDNLLEEVARVNNNINISNLTPSSNADLGLMRALAVVKELEKNPRLKQLELKFRAYSAAQLYLPSGEYAGV
QRYPDPQRRRIEIRFSPPADKK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30069; Mature: 29938

Theoretical pI: Translated: 10.20; Mature: 10.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRRLRYSRLNQALNVWQSFTDVMSSAFMILSLFLFLALLKSGVVNSDISRVNTELKLVK
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCEEEEEE
IENKKLQDKVKEKDKEIQEKSEKIKQQEKTIKRKNEEISSLTSQPPIEITEVSNRKFPSG
ECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCC
SAELSDGLVNFIENNLVKQIENYAQGKEGYIVQVIGHTDGQKNNRFQVSNLDNLLEEVAR
CHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCEEHHHHHHHHHHHHH
VNNNINISNLTPSSNADLGLMRALAVVKELEKNPRLKQLELKFRAYSAAQLYLPSGEYAG
HCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCEEEEECCCCCCCC
VQRYPDPQRRRIEIRFSPPADKK
CCCCCCCCCCEEEEEECCCCCCC
>Mature Secondary Structure 
SRRLRYSRLNQALNVWQSFTDVMSSAFMILSLFLFLALLKSGVVNSDISRVNTELKLVK
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCEEEEEE
IENKKLQDKVKEKDKEIQEKSEKIKQQEKTIKRKNEEISSLTSQPPIEITEVSNRKFPSG
ECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCC
SAELSDGLVNFIENNLVKQIENYAQGKEGYIVQVIGHTDGQKNNRFQVSNLDNLLEEVAR
CHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCEEHHHHHHHHHHHHH
VNNNINISNLTPSSNADLGLMRALAVVKELEKNPRLKQLELKFRAYSAAQLYLPSGEYAG
HCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCEEEEECCCCCCCC
VQRYPDPQRRRIEIRFSPPADKK
CCCCCCCCCCEEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA