Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113475379

Identifier: 113475379

GI number: 113475379

Start: 2586415

End: 2586891

Strand: Reverse

Name: 113475379

Synonym: Tery_1702

Alternate gene names: NA

Gene position: 2586891-2586415 (Counterclockwise)

Preceding gene: 113475380

Following gene: 113475378

Centisome position: 33.38

GC content: 38.57

Gene sequence:

>477_bases
ATGGGATATAGAGCACCTTCAGCAGAAGATATATATCGTTACCTATTTCGGTTAGACAATTATAGCCGATCGCTTACTGA
TGGATTTTGTTTAAGTATTATTTTTGTGAATGATGACTCACCTGTATGCCAGGACTTGATTAGCCATTACTTTATAGATC
TCTGTCACCGCACTGCTGATCGCATACGCATAATTTTCTTCTCAGAGCTTCCTGAAGCATATTTCGAGGATATTGCGTCT
AGGATGAACTCTAATTCCTTTTCGGCTAAAAGACTACGTAACAATGGCCTTCTTAACCAAGTAATTGAGAGATTCTCTAG
ATCAGACAGATATAGTATAGGAGAAATACTGAATGATTTTTGGGAAGCACTACACTGGCGAAACTACAACGAAGTAGATT
TCTTTTTGTCAAGAATTTCTCAGAGGTTTGGCCCTACAGATCGCAGACGCCCTTTATCGTTTAGTTTGCCAACATAA

Upstream 100 bases:

>100_bases
GAATAGCTAGGGTTGGATAGTACTTTCAGTCCTCTTCTATTCACAATCAAGTAATTAATCGAGTTGCCCTCTAAATATAA
TTTGAGTAAGGATTACTTCG

Downstream 100 bases:

>100_bases
AGATAATCCTGATACACAGCTCGAAGCAGGCATATACCAACTTATTGAGGAGATGAGAAGTCGTGAGTGGAGGACAAGGC
GGAATCGCTTTCGACGAATG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 158; Mature: 157

Protein sequence:

>158_residues
MGYRAPSAEDIYRYLFRLDNYSRSLTDGFCLSIIFVNDDSPVCQDLISHYFIDLCHRTADRIRIIFFSELPEAYFEDIAS
RMNSNSFSAKRLRNNGLLNQVIERFSRSDRYSIGEILNDFWEALHWRNYNEVDFFLSRISQRFGPTDRRRPLSFSLPT

Sequences:

>Translated_158_residues
MGYRAPSAEDIYRYLFRLDNYSRSLTDGFCLSIIFVNDDSPVCQDLISHYFIDLCHRTADRIRIIFFSELPEAYFEDIAS
RMNSNSFSAKRLRNNGLLNQVIERFSRSDRYSIGEILNDFWEALHWRNYNEVDFFLSRISQRFGPTDRRRPLSFSLPT
>Mature_157_residues
GYRAPSAEDIYRYLFRLDNYSRSLTDGFCLSIIFVNDDSPVCQDLISHYFIDLCHRTADRIRIIFFSELPEAYFEDIASR
MNSNSFSAKRLRNNGLLNQVIERFSRSDRYSIGEILNDFWEALHWRNYNEVDFFLSRISQRFGPTDRRRPLSFSLPT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18792; Mature: 18661

Theoretical pI: Translated: 6.78; Mature: 6.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGYRAPSAEDIYRYLFRLDNYSRSLTDGFCLSIIFVNDDSPVCQDLISHYFIDLCHRTAD
CCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHH
RIRIIFFSELPEAYFEDIASRMNSNSFSAKRLRNNGLLNQVIERFSRSDRYSIGEILNDF
HEEEHHHHHCCHHHHHHHHHHHCCCCHHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHHHH
WEALHWRNYNEVDFFLSRISQRFGPTDRRRPLSFSLPT
HHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
GYRAPSAEDIYRYLFRLDNYSRSLTDGFCLSIIFVNDDSPVCQDLISHYFIDLCHRTAD
CCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHH
RIRIIFFSELPEAYFEDIASRMNSNSFSAKRLRNNGLLNQVIERFSRSDRYSIGEILNDF
HEEEHHHHHCCHHHHHHHHHHHCCCCHHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHHHH
WEALHWRNYNEVDFFLSRISQRFGPTDRRRPLSFSLPT
HHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA