Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113475380

Identifier: 113475380

GI number: 113475380

Start: 2587137

End: 2589089

Strand: Reverse

Name: 113475380

Synonym: Tery_1703

Alternate gene names: NA

Gene position: 2589089-2587137 (Counterclockwise)

Preceding gene: 113475381

Following gene: 113475379

Centisome position: 33.41

GC content: 40.86

Gene sequence:

>1953_bases
ATGAACATCCTAGGAATTTCAGCTTATTACCACGATAGTGCAGCAGCTCTCGTATGTGACGGAAAAATTATCGCCGCCGC
CCAAGAAGAAAGATTTTCTCGTAAAAAACATGATCCCAGATTTCCCCAAAATGCTATTTCCTATTGTCTGAAAGAAGCCA
ACATAGAATTACTGGACTTAGACCAAATAGTTTTTTACGACAAACCTTTAGTTAAATTCGAGCGACTTCTGGAAACTTAC
CTCAGCTATGCTCCTAAAGGCTTTCGGTCTTTTCTCATGGCAATGCCGATCTGGTTAAAAGAAAAATTATATTTAAAAAC
CCTTTTAAAAAAAGAATTAGCTACATTGGGTCAGTGTAAAGCATCCCATATCCCCAAACTGATGTTTACCGAACATCATC
AAGCTCATGCAGCTTCAGCTTTTTTCCCCAGTCCCTTTGACCGTGCTGCGGTAATGTGTCTGGATGGAGTGGGTGAGTGG
GCGACTACTTCAGTTTGGTTGGGAGAAGGAAATAAACTTACTCCCCAGTGGGAAATTGATTTTCCTCACTCTTTAGGTTT
ACTCTACTCAGCTTTTACTTATTACACAGGCTTCAAAGTCAATTCTGGGGAATACAAACTTATGGGTTTAGCTCCTTATG
GAGAACCTAATTATGTAGACTTAATTTTAAATAACCTTATAGATTTAAAAGCTGATGGTACTTTCCGGTTGAATATGGAA
TATTTCAATTACACAACCGGGTTGACTATGACTAATGAGAAGTTTGATAAATTGTTTGGCGGGTCTCCTCGAAAAGCTGA
AACTAAAATTAGTCAACGAGAAATGGATATTGCTGCTTCTATTCAGAGAGTAACTGAGGAGGTGGTATTACGTCTGAGTC
GAACGGTGCAAAAAGAACTTGATACTGACTATCTTTGTTTGGCAGGGGGAGTTGCTCTTAATTGTGTAGCGAATGGTAAA
GTTCTACGGGAAGGTATTTTTAAGGATATTTGGATTCAACCTGCAGCGGGAGATGCTGGTGGTGCCTTAGGTGCTGCTTT
GGCTGTTTGGTACGAATACCATGACCAACCGCGGGTAATAGAAAAGCTTGATAGTAGGAAGGTTCCTAGGAATATTTCTA
AGGAATACAATGTTTCTGCTTCTGTGGAGTCTAGAAATTCTGCTGTTTCTGTGGCAAAACGTCTTGTTTGTAGTGCTCCT
AATGACATGATGCAGGGTGCTTATCTCGGACCTAAGTTTGAAGATGAGGAGATTCGGGAATATCTTGATGCTATTCAGGC
AAAATATGAATATTTGCCAGATACAGAGTTAATGCCTCGGTTGGCAAAAATTTTGGATAATGGCAATGTGGTGGGATGGT
TTCAAGGTCGGATGGAGTTCGGACCTCGCGCTTTGGGTGGGCGGTCTATTATTGGAGACCCTCGAAATACTAAGATGCAG
TCGGTGATGAATTTGAAGATTAAGTATCGGGAGTCTTTTCGACCTTTTGCTCCTTCGGTTTTGGCGGAACGAGTTTCGGA
TTATTTTGATATTGAACATTCTAGTCCTTATATGTTGTTGGTAGCTCCGGTGCAGGAGGGTTTGTTAATTCCTATGACTG
AGGACCAAAGGCAGTTGTTTGGTATTGAGAAGTTGAATGTGCCACGCTCGGAAATTCCGGCTATTACTCATGTTGATTAT
TCGGCGAGAATTCAAACTATTCATCAGGAAACTAATCCTCGTTATCATGATTTGATTAGTCATTTTGAAAAGCTCACGGG
ATGTGGGGTAATTGTGAATACTTCTTTTAATGTGCGGGGTGAACCAATTGTTTGTACTCCGGAGGATGCTTATCGGTGTT
TTATGCGGACTGAGATGGATTATTTGGTGGTGGAGAATTTTTTGATGGCTAAAACGGATCAAATTCCTTGGGAAAAGGAT
GAGTCTTGGAAGGAGGAGTTTGAGTTGGATTAG

Upstream 100 bases:

>100_bases
GTCTAGATGACTATGCTGTGATGAACTATAATCTGAGGATATTTAACTAAATATTGGCCAAAACTAGATTAAAGCCATGA
GAGGAGAAAACTTATAGACT

Downstream 100 bases:

>100_bases
AAAGAATTGATTAAACGTTAATGTGGCTCAAAGCTAGAGTCCGATAGCTCTTATAATGGACTGACACAATTAATTTGTTT
TCCAGGTCATCTGTAGTACT

Product: carbamoyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 650; Mature: 650

Protein sequence:

>650_residues
MNILGISAYYHDSAAALVCDGKIIAAAQEERFSRKKHDPRFPQNAISYCLKEANIELLDLDQIVFYDKPLVKFERLLETY
LSYAPKGFRSFLMAMPIWLKEKLYLKTLLKKELATLGQCKASHIPKLMFTEHHQAHAASAFFPSPFDRAAVMCLDGVGEW
ATTSVWLGEGNKLTPQWEIDFPHSLGLLYSAFTYYTGFKVNSGEYKLMGLAPYGEPNYVDLILNNLIDLKADGTFRLNME
YFNYTTGLTMTNEKFDKLFGGSPRKAETKISQREMDIAASIQRVTEEVVLRLSRTVQKELDTDYLCLAGGVALNCVANGK
VLREGIFKDIWIQPAAGDAGGALGAALAVWYEYHDQPRVIEKLDSRKVPRNISKEYNVSASVESRNSAVSVAKRLVCSAP
NDMMQGAYLGPKFEDEEIREYLDAIQAKYEYLPDTELMPRLAKILDNGNVVGWFQGRMEFGPRALGGRSIIGDPRNTKMQ
SVMNLKIKYRESFRPFAPSVLAERVSDYFDIEHSSPYMLLVAPVQEGLLIPMTEDQRQLFGIEKLNVPRSEIPAITHVDY
SARIQTIHQETNPRYHDLISHFEKLTGCGVIVNTSFNVRGEPIVCTPEDAYRCFMRTEMDYLVVENFLMAKTDQIPWEKD
ESWKEEFELD

Sequences:

>Translated_650_residues
MNILGISAYYHDSAAALVCDGKIIAAAQEERFSRKKHDPRFPQNAISYCLKEANIELLDLDQIVFYDKPLVKFERLLETY
LSYAPKGFRSFLMAMPIWLKEKLYLKTLLKKELATLGQCKASHIPKLMFTEHHQAHAASAFFPSPFDRAAVMCLDGVGEW
ATTSVWLGEGNKLTPQWEIDFPHSLGLLYSAFTYYTGFKVNSGEYKLMGLAPYGEPNYVDLILNNLIDLKADGTFRLNME
YFNYTTGLTMTNEKFDKLFGGSPRKAETKISQREMDIAASIQRVTEEVVLRLSRTVQKELDTDYLCLAGGVALNCVANGK
VLREGIFKDIWIQPAAGDAGGALGAALAVWYEYHDQPRVIEKLDSRKVPRNISKEYNVSASVESRNSAVSVAKRLVCSAP
NDMMQGAYLGPKFEDEEIREYLDAIQAKYEYLPDTELMPRLAKILDNGNVVGWFQGRMEFGPRALGGRSIIGDPRNTKMQ
SVMNLKIKYRESFRPFAPSVLAERVSDYFDIEHSSPYMLLVAPVQEGLLIPMTEDQRQLFGIEKLNVPRSEIPAITHVDY
SARIQTIHQETNPRYHDLISHFEKLTGCGVIVNTSFNVRGEPIVCTPEDAYRCFMRTEMDYLVVENFLMAKTDQIPWEKD
ESWKEEFELD
>Mature_650_residues
MNILGISAYYHDSAAALVCDGKIIAAAQEERFSRKKHDPRFPQNAISYCLKEANIELLDLDQIVFYDKPLVKFERLLETY
LSYAPKGFRSFLMAMPIWLKEKLYLKTLLKKELATLGQCKASHIPKLMFTEHHQAHAASAFFPSPFDRAAVMCLDGVGEW
ATTSVWLGEGNKLTPQWEIDFPHSLGLLYSAFTYYTGFKVNSGEYKLMGLAPYGEPNYVDLILNNLIDLKADGTFRLNME
YFNYTTGLTMTNEKFDKLFGGSPRKAETKISQREMDIAASIQRVTEEVVLRLSRTVQKELDTDYLCLAGGVALNCVANGK
VLREGIFKDIWIQPAAGDAGGALGAALAVWYEYHDQPRVIEKLDSRKVPRNISKEYNVSASVESRNSAVSVAKRLVCSAP
NDMMQGAYLGPKFEDEEIREYLDAIQAKYEYLPDTELMPRLAKILDNGNVVGWFQGRMEFGPRALGGRSIIGDPRNTKMQ
SVMNLKIKYRESFRPFAPSVLAERVSDYFDIEHSSPYMLLVAPVQEGLLIPMTEDQRQLFGIEKLNVPRSEIPAITHVDY
SARIQTIHQETNPRYHDLISHFEKLTGCGVIVNTSFNVRGEPIVCTPEDAYRCFMRTEMDYLVVENFLMAKTDQIPWEKD
ESWKEEFELD

Specific function: Unknown

COG id: COG2192

COG function: function code O; Predicted carbamoyl transferase, NodU family

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the NodU/CmcH family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003696 [H]

Pfam domain/function: PF02543 CmcH_NodU [H]

EC number: NA

Molecular weight: Translated: 73855; Mature: 73855

Theoretical pI: Translated: 5.70; Mature: 5.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNILGISAYYHDSAAALVCDGKIIAAAQEERFSRKKHDPRFPQNAISYCLKEANIELLDL
CCEEEEEEEEECCCEEEEECCEEEEHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCEEEEC
DQIVFYDKPLVKFERLLETYLSYAPKGFRSFLMAMPIWLKEKLYLKTLLKKELATLGQCK
CHHEECCCHHHHHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
ASHIPKLMFTEHHQAHAASAFFPSPFDRAAVMCLDGVGEWATTSVWLGEGNKLTPQWEID
HHCCCHHHCCCCHHHHHHHCCCCCCCHHHHHHHCCCCCCCCEEEEEECCCCEECCEEECC
FPHSLGLLYSAFTYYTGFKVNSGEYKLMGLAPYGEPNYVDLILNNLIDLKADGTFRLNME
CCHHHHHHHHHHHHHCCEEECCCCEEEEEECCCCCCCHHHHHHHHHHEECCCCEEEEEEE
YFNYTTGLTMTNEKFDKLFGGSPRKAETKISQREMDIAASIQRVTEEVVLRLSRTVQKEL
EEEEECCCEECCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
DTDYLCLAGGVALNCVANGKVLREGIFKDIWIQPAAGDAGGALGAALAVWYEYHDQPRVI
CCCEEEEECCEEEEEEECCHHHHHHHHHHHEEECCCCCCCHHHHHHHHHHHHHCCCCHHH
EKLDSRKVPRNISKEYNVSASVESRNSAVSVAKRLVCSAPNDMMQGAYLGPKFEDEEIRE
HHHHCCCCCCCCCCCCCCEEECCCCHHHHHHHHHHHHCCCHHHHCCCCCCCCCCHHHHHH
YLDAIQAKYEYLPDTELMPRLAKILDNGNVVGWFQGRMEFGPRALGGRSIIGDPRNTKMQ
HHHHHHHHHHCCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCHHHH
SVMNLKIKYRESFRPFAPSVLAERVSDYFDIEHSSPYMLLVAPVQEGLLIPMTEDQRQLF
HHHHEEEEECCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEEEECCCCEEEECCCCHHHHH
GIEKLNVPRSEIPAITHVDYSARIQTIHQETNPRYHDLISHFEKLTGCGVIVNTSFNVRG
CCHHCCCCHHHCCEEEECCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCEEEECCCCCCC
EPIVCTPEDAYRCFMRTEMDYLVVENFLMAKTDQIPWEKDESWKEEFELD
CEEEECCHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHCCCC
>Mature Secondary Structure
MNILGISAYYHDSAAALVCDGKIIAAAQEERFSRKKHDPRFPQNAISYCLKEANIELLDL
CCEEEEEEEEECCCEEEEECCEEEEHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCEEEEC
DQIVFYDKPLVKFERLLETYLSYAPKGFRSFLMAMPIWLKEKLYLKTLLKKELATLGQCK
CHHEECCCHHHHHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
ASHIPKLMFTEHHQAHAASAFFPSPFDRAAVMCLDGVGEWATTSVWLGEGNKLTPQWEID
HHCCCHHHCCCCHHHHHHHCCCCCCCHHHHHHHCCCCCCCCEEEEEECCCCEECCEEECC
FPHSLGLLYSAFTYYTGFKVNSGEYKLMGLAPYGEPNYVDLILNNLIDLKADGTFRLNME
CCHHHHHHHHHHHHHCCEEECCCCEEEEEECCCCCCCHHHHHHHHHHEECCCCEEEEEEE
YFNYTTGLTMTNEKFDKLFGGSPRKAETKISQREMDIAASIQRVTEEVVLRLSRTVQKEL
EEEEECCCEECCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
DTDYLCLAGGVALNCVANGKVLREGIFKDIWIQPAAGDAGGALGAALAVWYEYHDQPRVI
CCCEEEEECCEEEEEEECCHHHHHHHHHHHEEECCCCCCCHHHHHHHHHHHHHCCCCHHH
EKLDSRKVPRNISKEYNVSASVESRNSAVSVAKRLVCSAPNDMMQGAYLGPKFEDEEIRE
HHHHCCCCCCCCCCCCCCEEECCCCHHHHHHHHHHHHCCCHHHHCCCCCCCCCCHHHHHH
YLDAIQAKYEYLPDTELMPRLAKILDNGNVVGWFQGRMEFGPRALGGRSIIGDPRNTKMQ
HHHHHHHHHHCCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCHHHH
SVMNLKIKYRESFRPFAPSVLAERVSDYFDIEHSSPYMLLVAPVQEGLLIPMTEDQRQLF
HHHHEEEEECCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEEEECCCCEEEECCCCHHHHH
GIEKLNVPRSEIPAITHVDYSARIQTIHQETNPRYHDLISHFEKLTGCGVIVNTSFNVRG
CCHHCCCCHHHCCEEEECCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCEEEECCCCCCC
EPIVCTPEDAYRCFMRTEMDYLVVENFLMAKTDQIPWEKDESWKEEFELD
CEEEECCHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]