| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is 113475370
Identifier: 113475370
GI number: 113475370
Start: 2569444
End: 2570484
Strand: Direct
Name: 113475370
Synonym: Tery_1687
Alternate gene names: NA
Gene position: 2569444-2570484 (Clockwise)
Preceding gene: 113475368
Following gene: 113475373
Centisome position: 33.15
GC content: 46.3
Gene sequence:
>1041_bases ATGAGCCCATATTTAGAGGAGCTAAAAGTAACAGCTCAAGCAATGGTGGCCAAAGGCAAAGGCATTTTGGCTATGGATGA AAGTAATGGAACTTGCAATAAGCGGTTTGAGAAGCTTGGCATTCCAACGACCGAAGAGTATCGACAGGCCTATCGGCAAC TCATTCTAACAACCCCAGATTTATCTAATTACATTAGTGGACCTATTCTCTACGATGAGACTATCCGACAATCGACAACA GAGGGAGTCCCCTTCTTGAAAGTCATTACCGATGCTGGAATGATCCCCGGAATTAAAGTGGACACTGGGGCAAAGAATTT AGCAAATCACCCTAATGAGAAGGTAACAGAAGGGTTAGATGGTTTGGGAGAGCGCATCGCCGAGTATTATCAGATGGGAG CACGCTTCGCCAAGTGGCGAGCGGTCATTACTATCGGTGACGGAATTCCCAGTCGTGCTTGTATCGAAGCTAATGCTCAT GGCCTTGCTCGCTATGCTGCTCTCTGCCAAGAAGGGGGACTTGTCCCGATCGTAGAACCTGAGGTGCTTATTGACGGTAA TCATACTCTAGAGCGCTGCTTTGAGGTAACAGATGAAACACTTCATACAGTTTTCAATCATCTCTATACTCAAGGGGTTG CTTTTGACCAGATGATTTTGAAACCTAGTATGGTAATTCCAGGTAAGGACTGCCCGACTCAAGTTAGTGTTGAGGCTGTT GCTGAAGCAACAATTAACTGTCTCCTAAAAAATGTCCCTGTAACTGTAGCAGGTATTGCTTTCCTTTCGGGAGGTCAATC TATAGAGCAGTCTTCAGCTCACTTAAACGCAATGAATGCATTGTTTGGCAGTCGGTGCCCTTGGCCAGTTACATTCTCTT ATGCCCGTGCTATTCAACAACCTGCACTTGATTACTGGAGTGGTGACAGTGCTCGGGTAGCAGAGGCTCAACAGAAGCTT TTAGCTCGTGCTAAGTGCAACAGTGCTGCTAGCGTTGGCGAATACTCGGCTAGCATGGATGAAACACCTGTTCTCGTCTA A
Upstream 100 bases:
>100_bases TTCATAGGTTAAATATTGAAAAAAATTTTTATTTGATTAAGGTTCTTATTAAGATATTATATCAATAAGGAACAACTATG CAATTACCTTGAGGAGGTTT
Downstream 100 bases:
>100_bases TATTTTCACTGTTGTCTCATAACTGTAAACACTTTTCTGTGTGGAGTATTTCTGGGGACAGCATTGTTCCCAGATCCTTT TTCATTACAGCTAATTTGAA
Product: fructose-bisphosphate aldolase
Products: NA
Alternate protein names: Fructose-biphosphate aldolase class I; FBP aldolase [H]
Number of amino acids: Translated: 346; Mature: 345
Protein sequence:
>346_residues MSPYLEELKVTAQAMVAKGKGILAMDESNGTCNKRFEKLGIPTTEEYRQAYRQLILTTPDLSNYISGPILYDETIRQSTT EGVPFLKVITDAGMIPGIKVDTGAKNLANHPNEKVTEGLDGLGERIAEYYQMGARFAKWRAVITIGDGIPSRACIEANAH GLARYAALCQEGGLVPIVEPEVLIDGNHTLERCFEVTDETLHTVFNHLYTQGVAFDQMILKPSMVIPGKDCPTQVSVEAV AEATINCLLKNVPVTVAGIAFLSGGQSIEQSSAHLNAMNALFGSRCPWPVTFSYARAIQQPALDYWSGDSARVAEAQQKL LARAKCNSAASVGEYSASMDETPVLV
Sequences:
>Translated_346_residues MSPYLEELKVTAQAMVAKGKGILAMDESNGTCNKRFEKLGIPTTEEYRQAYRQLILTTPDLSNYISGPILYDETIRQSTT EGVPFLKVITDAGMIPGIKVDTGAKNLANHPNEKVTEGLDGLGERIAEYYQMGARFAKWRAVITIGDGIPSRACIEANAH GLARYAALCQEGGLVPIVEPEVLIDGNHTLERCFEVTDETLHTVFNHLYTQGVAFDQMILKPSMVIPGKDCPTQVSVEAV AEATINCLLKNVPVTVAGIAFLSGGQSIEQSSAHLNAMNALFGSRCPWPVTFSYARAIQQPALDYWSGDSARVAEAQQKL LARAKCNSAASVGEYSASMDETPVLV >Mature_345_residues SPYLEELKVTAQAMVAKGKGILAMDESNGTCNKRFEKLGIPTTEEYRQAYRQLILTTPDLSNYISGPILYDETIRQSTTE GVPFLKVITDAGMIPGIKVDTGAKNLANHPNEKVTEGLDGLGERIAEYYQMGARFAKWRAVITIGDGIPSRACIEANAHG LARYAALCQEGGLVPIVEPEVLIDGNHTLERCFEVTDETLHTVFNHLYTQGVAFDQMILKPSMVIPGKDCPTQVSVEAVA EATINCLLKNVPVTVAGIAFLSGGQSIEQSSAHLNAMNALFGSRCPWPVTFSYARAIQQPALDYWSGDSARVAEAQQKLL ARAKCNSAASVGEYSASMDETPVLV
Specific function: Unknown
COG id: COG3588
COG function: function code G; Fructose-1,6-bisphosphate aldolase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class I fructose-bisphosphate aldolase family [H]
Homologues:
Organism=Homo sapiens, GI34577112, Length=338, Percent_Identity=47.3372781065089, Blast_Score=296, Evalue=3e-80, Organism=Homo sapiens, GI34577110, Length=338, Percent_Identity=47.3372781065089, Blast_Score=296, Evalue=3e-80, Organism=Homo sapiens, GI4557305, Length=338, Percent_Identity=47.3372781065089, Blast_Score=296, Evalue=3e-80, Organism=Homo sapiens, GI193794814, Length=338, Percent_Identity=47.3372781065089, Blast_Score=296, Evalue=3e-80, Organism=Homo sapiens, GI4885063, Length=341, Percent_Identity=45.1612903225806, Blast_Score=294, Evalue=1e-79, Organism=Homo sapiens, GI40354205, Length=331, Percent_Identity=43.202416918429, Blast_Score=274, Evalue=8e-74, Organism=Caenorhabditis elegans, GI71983985, Length=330, Percent_Identity=46.969696969697, Blast_Score=299, Evalue=1e-81, Organism=Caenorhabditis elegans, GI25150450, Length=333, Percent_Identity=45.6456456456456, Blast_Score=288, Evalue=4e-78, Organism=Caenorhabditis elegans, GI71983990, Length=235, Percent_Identity=46.8085106382979, Blast_Score=213, Evalue=9e-56, Organism=Drosophila melanogaster, GI221459619, Length=333, Percent_Identity=45.3453453453453, Blast_Score=282, Evalue=3e-76, Organism=Drosophila melanogaster, GI24650288, Length=333, Percent_Identity=45.3453453453453, Blast_Score=282, Evalue=3e-76, Organism=Drosophila melanogaster, GI24650282, Length=331, Percent_Identity=45.3172205438066, Blast_Score=280, Evalue=9e-76, Organism=Drosophila melanogaster, GI24650280, Length=331, Percent_Identity=45.3172205438066, Blast_Score=280, Evalue=9e-76, Organism=Drosophila melanogaster, GI24650278, Length=331, Percent_Identity=45.3172205438066, Blast_Score=280, Evalue=9e-76, Organism=Drosophila melanogaster, GI45553577, Length=331, Percent_Identity=45.619335347432, Blast_Score=279, Evalue=2e-75, Organism=Drosophila melanogaster, GI24650304, Length=331, Percent_Identity=41.0876132930514, Blast_Score=263, Evalue=1e-70,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000741 - InterPro: IPR013785 [H]
Pfam domain/function: PF00274 Glycolytic [H]
EC number: =4.1.2.13 [H]
Molecular weight: Translated: 37462; Mature: 37331
Theoretical pI: Translated: 4.96; Mature: 4.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSPYLEELKVTAQAMVAKGKGILAMDESNGTCNKRFEKLGIPTTEEYRQAYRQLILTTPD CCCHHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHCCCCCHHHHHHHHHHHHCCCCC LSNYISGPILYDETIRQSTTEGVPFLKVITDAGMIPGIKVDTGAKNLANHPNEKVTEGLD HHHHHCCCEEEHHHHHHHHCCCCCHHHHHHHCCCCCCEEECCCCHHHHCCCCHHHHHHHH GLGERIAEYYQMGARFAKWRAVITIGDGIPSRACIEANAHGLARYAALCQEGGLVPIVEP HHHHHHHHHHHHHHHHHHEEEEEEECCCCCCCCEECCCHHHHHHHHHHHHCCCEEEEECC EVLIDGNHTLERCFEVTDETLHTVFNHLYTQGVAFDQMILKPSMVIPGKDCPTQVSVEAV CEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCEECCCCCCCCHHHHHHH AEATINCLLKNVPVTVAGIAFLSGGQSIEQSSAHLNAMNALFGSRCPWPVTFSYARAIQQ HHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH PALDYWSGDSARVAEAQQKLLARAKCNSAASVGEYSASMDETPVLV CCHHHCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCC >Mature Secondary Structure SPYLEELKVTAQAMVAKGKGILAMDESNGTCNKRFEKLGIPTTEEYRQAYRQLILTTPD CCHHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHCCCCCHHHHHHHHHHHHCCCCC LSNYISGPILYDETIRQSTTEGVPFLKVITDAGMIPGIKVDTGAKNLANHPNEKVTEGLD HHHHHCCCEEEHHHHHHHHCCCCCHHHHHHHCCCCCCEEECCCCHHHHCCCCHHHHHHHH GLGERIAEYYQMGARFAKWRAVITIGDGIPSRACIEANAHGLARYAALCQEGGLVPIVEP HHHHHHHHHHHHHHHHHHEEEEEEECCCCCCCCEECCCHHHHHHHHHHHHCCCEEEEECC EVLIDGNHTLERCFEVTDETLHTVFNHLYTQGVAFDQMILKPSMVIPGKDCPTQVSVEAV CEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCEECCCCCCCCHHHHHHH AEATINCLLKNVPVTVAGIAFLSGGQSIEQSSAHLNAMNALFGSRCPWPVTFSYARAIQQ HHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH PALDYWSGDSARVAEAQQKLLARAKCNSAASVGEYSASMDETPVLV CCHHHCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10910347 [H]