Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113475363

Identifier: 113475363

GI number: 113475363

Start: 2560492

End: 2561721

Strand: Reverse

Name: 113475363

Synonym: Tery_1680

Alternate gene names: NA

Gene position: 2561721-2560492 (Counterclockwise)

Preceding gene: 113475364

Following gene: 113475362

Centisome position: 33.05

GC content: 33.5

Gene sequence:

>1230_bases
ATGAAAAAGCTACATAATTTAGCCATCAATTTAGGATTAATATTAGGTACATTAATATTTACTTTAACAGTAGGTGAAAT
AGGATTAAGAATAGCAGGAATTAAGCATCCAGCGCCAAGAAAGGATGCAGATGAAAATCCTCTTCATACTTTCCAAGATC
TATATAGAGGTTGGGCAGGAAAACCTCATGGGAAAGGGTTATGGAAGGAAGAGGGTGTTCCTTCCGAAATAAAAATGAAT
AGTGCAGGATTTCGTGATTATGAACGGAGTAAAAATAAACCAGAAAATGGATTAAGAATTGCCTTATTAGGAGACTCTTA
TACAGAAGCACTTCAGGTAAAATTAGAAGATACCTATGGTGCAATAATGGAGGAAAAATTACAACAATGTCCTGTGTTAA
AAAACCGAAAAGTAGAAGTAATGAATTTTGGTGTAAGTGGTTATAGCACAGCCCAAGAATTAATGACTTTAAGGTATCAT
GTTTGGGATTATCAACCAGATTTAGTCATGTTAGCTTTTTATGCAGGTAACGATCTTAGTAATAATTCTCCTAGTCTAGA
ACATGACCATTTACGCCCTTATTTTGTTTACAAAGATGGGCAACTTGTAGCAGATATGTCATTTCGTAATTTGAAGTTTT
GGCAGAGAAACCGTTATGCTTTTTCTCTGGTGGATTTTTTGCCATTTTGGTTAGTTAAAAATTCCCGAATTATGCAGCTA
ATTAGAAAGGTAGATATTGATGCTAAACGCCGTCAGTATAACAAAGATTATAGGGAAATTAATATAGATTTTTATAAAGA
ACCAAAACCAAATTCTGATTGGTCAGAAACTTGGGAAGTAACTGAGGGTTTAATTAAGCTAATGCGAGATGAAGTATATG
AAAAAAAAGCAGACTTTATGATGATAACAGTCAGTCATTCTTCTCAAGTACTACCTGATATTCAACAGCGTAATAATTTG
AAAAAATCTTTAAATGTGTCAAATTTATTCTACCCAGATATCAGACTGAAAAATTTTGGGAAAAAGGAAAATATACCAGT
CTATAATTTAGCTGGTCCTATATGGGATGAGGCTAAAAAAACAGGTAAATGTTTCCATGGTTTTGATAATGCACTTCCCT
GCGGTGGTCATTGGAACGTGGAAGGTCATAAATTGGTCGGGGAAATAATGGCAAATTATTTCTGCGATAAATATACTATT
CCTAAATCATTTGTGAGAAAAAAAATGTAG

Upstream 100 bases:

>100_bases
CATTATGTATTGGGCATTGGAACATAGAAGGGCATCAATTAGCAGGAGAAATTATTACTAATAACCTCTGCAAACAGTTC
AAATTTAATTATAATCAATA

Downstream 100 bases:

>100_bases
GTGTTTAGCTTCCAAATCCTATTTTTTGCAAAAAGCAATATGATTTTCTAGGTAAACTATTGGAACTATGCCCTTTTTGA
TCAAATTTTGCTTGTATTTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 409; Mature: 409

Protein sequence:

>409_residues
MKKLHNLAINLGLILGTLIFTLTVGEIGLRIAGIKHPAPRKDADENPLHTFQDLYRGWAGKPHGKGLWKEEGVPSEIKMN
SAGFRDYERSKNKPENGLRIALLGDSYTEALQVKLEDTYGAIMEEKLQQCPVLKNRKVEVMNFGVSGYSTAQELMTLRYH
VWDYQPDLVMLAFYAGNDLSNNSPSLEHDHLRPYFVYKDGQLVADMSFRNLKFWQRNRYAFSLVDFLPFWLVKNSRIMQL
IRKVDIDAKRRQYNKDYREINIDFYKEPKPNSDWSETWEVTEGLIKLMRDEVYEKKADFMMITVSHSSQVLPDIQQRNNL
KKSLNVSNLFYPDIRLKNFGKKENIPVYNLAGPIWDEAKKTGKCFHGFDNALPCGGHWNVEGHKLVGEIMANYFCDKYTI
PKSFVRKKM

Sequences:

>Translated_409_residues
MKKLHNLAINLGLILGTLIFTLTVGEIGLRIAGIKHPAPRKDADENPLHTFQDLYRGWAGKPHGKGLWKEEGVPSEIKMN
SAGFRDYERSKNKPENGLRIALLGDSYTEALQVKLEDTYGAIMEEKLQQCPVLKNRKVEVMNFGVSGYSTAQELMTLRYH
VWDYQPDLVMLAFYAGNDLSNNSPSLEHDHLRPYFVYKDGQLVADMSFRNLKFWQRNRYAFSLVDFLPFWLVKNSRIMQL
IRKVDIDAKRRQYNKDYREINIDFYKEPKPNSDWSETWEVTEGLIKLMRDEVYEKKADFMMITVSHSSQVLPDIQQRNNL
KKSLNVSNLFYPDIRLKNFGKKENIPVYNLAGPIWDEAKKTGKCFHGFDNALPCGGHWNVEGHKLVGEIMANYFCDKYTI
PKSFVRKKM
>Mature_409_residues
MKKLHNLAINLGLILGTLIFTLTVGEIGLRIAGIKHPAPRKDADENPLHTFQDLYRGWAGKPHGKGLWKEEGVPSEIKMN
SAGFRDYERSKNKPENGLRIALLGDSYTEALQVKLEDTYGAIMEEKLQQCPVLKNRKVEVMNFGVSGYSTAQELMTLRYH
VWDYQPDLVMLAFYAGNDLSNNSPSLEHDHLRPYFVYKDGQLVADMSFRNLKFWQRNRYAFSLVDFLPFWLVKNSRIMQL
IRKVDIDAKRRQYNKDYREINIDFYKEPKPNSDWSETWEVTEGLIKLMRDEVYEKKADFMMITVSHSSQVLPDIQQRNNL
KKSLNVSNLFYPDIRLKNFGKKENIPVYNLAGPIWDEAKKTGKCFHGFDNALPCGGHWNVEGHKLVGEIMANYFCDKYTI
PKSFVRKKM

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 47492; Mature: 47492

Theoretical pI: Translated: 9.40; Mature: 9.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKLHNLAINLGLILGTLIFTLTVGEIGLRIAGIKHPAPRKDADENPLHTFQDLYRGWAG
CCCHHHHHHHHHHHHHHHHHHHHHHHHCEEEECCCCCCCCCCCCCCHHHHHHHHHHHCCC
KPHGKGLWKEEGVPSEIKMNSAGFRDYERSKNKPENGLRIALLGDSYTEALQVKLEDTYG
CCCCCCCCCCCCCCCCEEECCCCCCHHHHCCCCCCCCEEEEEECCCCCEEEEEEEHHHHH
AIMEEKLQQCPVLKNRKVEVMNFGVSGYSTAQELMTLRYHVWDYQPDLVMLAFYAGNDLS
HHHHHHHHHCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCC
NNSPSLEHDHLRPYFVYKDGQLVADMSFRNLKFWQRNRYAFSLVDFLPFWLVKNSRIMQL
CCCCCCCCCCCCCEEEEECCCEEECCCCHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHH
IRKVDIDAKRRQYNKDYREINIDFYKEPKPNSDWSETWEVTEGLIKLMRDEVYEKKADFM
HHHHCCCHHHHHHCCCHHEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEE
MITVSHSSQVLPDIQQRNNLKKSLNVSNLFYPDIRLKNFGKKENIPVYNLAGPIWDEAKK
EEEECCCCCCCCCHHHHCCHHHHCCCCCEECCCCEECCCCCCCCCCEEECCCCCHHHHHH
TGKCFHGFDNALPCGGHWNVEGHKLVGEIMANYFCDKYTIPKSFVRKKM
HCCHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHCCC
>Mature Secondary Structure
MKKLHNLAINLGLILGTLIFTLTVGEIGLRIAGIKHPAPRKDADENPLHTFQDLYRGWAG
CCCHHHHHHHHHHHHHHHHHHHHHHHHCEEEECCCCCCCCCCCCCCHHHHHHHHHHHCCC
KPHGKGLWKEEGVPSEIKMNSAGFRDYERSKNKPENGLRIALLGDSYTEALQVKLEDTYG
CCCCCCCCCCCCCCCCEEECCCCCCHHHHCCCCCCCCEEEEEECCCCCEEEEEEEHHHHH
AIMEEKLQQCPVLKNRKVEVMNFGVSGYSTAQELMTLRYHVWDYQPDLVMLAFYAGNDLS
HHHHHHHHHCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCC
NNSPSLEHDHLRPYFVYKDGQLVADMSFRNLKFWQRNRYAFSLVDFLPFWLVKNSRIMQL
CCCCCCCCCCCCCEEEEECCCEEECCCCHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHH
IRKVDIDAKRRQYNKDYREINIDFYKEPKPNSDWSETWEVTEGLIKLMRDEVYEKKADFM
HHHHCCCHHHHHHCCCHHEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEE
MITVSHSSQVLPDIQQRNNLKKSLNVSNLFYPDIRLKNFGKKENIPVYNLAGPIWDEAKK
EEEECCCCCCCCCHHHHCCHHHHCCCCCEECCCCEECCCCCCCCCCEEECCCCCHHHHHH
TGKCFHGFDNALPCGGHWNVEGHKLVGEIMANYFCDKYTIPKSFVRKKM
HCCHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA