Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113475362

Identifier: 113475362

GI number: 113475362

Start: 2558466

End: 2559689

Strand: Reverse

Name: 113475362

Synonym: Tery_1679

Alternate gene names: NA

Gene position: 2559689-2558466 (Counterclockwise)

Preceding gene: 113475363

Following gene: 113475361

Centisome position: 33.03

GC content: 33.09

Gene sequence:

>1224_bases
ATGAAAAAATTGAAGAATTTAGTCATTAATTTAGGACTCACACTCACTACATTAATATTTACTGTTGCAGTAGGTGAAAT
AGGCCTAAGAACAGCAGGAATTGAGAATTCCCCACCACCAAGAATAGACGGGGAATTAGATGAGAATTCTCCCTACACTT
TCAAAGACTATTACCGAGGTTGGGCAGGAAATGCTAACGGCAAATCATTTTGGACCGGAGAAGGTATACCTTCGGAAATT
AAAATGAATAGTGGAGGGTTTCGAGATTATGAACGTAGTAAAAACAAACCAGAAAATGGTTTAAGAATTGCTTTATTAGG
AGATTCTTTTACAGAAGCAATTCATGTAAAATTAGAAGATACTTATGGTGCAATAATAGAACAAAATTTACAACAATGTC
CTGTCGTAAAAGACCAGAAAGTTGAAGTAATGAATTTTGGAGTACAGGGTTATGGAACAGCTCAAGAATTAATGACATTA
AGACATCATGTTTGGGATTATTCACCAGATTTAGTTATATTAGTTTTTTTTGCTGCTAACGACCTTCGTAATAATTCTCG
TACTTTAGAACATGACCATTTAAGACCCTATTTTATCTATCAAGACGGTCAACTTGTGACAGATATGTCATTCCGCGATT
TAAAATTTTGGCAGAGAGATCGTTATGCTTTTTCCCTAGTAGATTTTTTACCATTTTGGTTAGTGCAAAATTCTCGAATT
TTACAACTAATTAGAAAAGTAGAACTTGATGGTAAATACCGTCAGTATCAAAAAGACTATAGTGAAATTAATCTAGCTTT
TTATAAAAAGCCACAACCAAATTCTGATTGGGAAAAAACCTGGAAAGTGACTGAAAGTTTGATTAAATTAATGAGAGATG
AAGTCTCTGAAAAAGGAGCAGATTTTATGTTGATAACAGCGAGTGATTCTCATCAAGTTTTACCAGATATTGAAAGGCGT
GATGGATTTAGAAAATCTTTGAATGTATCAAATTTATTTTATCCAGATATCAGACTAAAAAATTTTGGGAAAAAGGAAAA
TATACCAGTTTATACTTTAGCGGGACCCATTTGGGATGAAGCTAAAAAAACAGGTAAATGTTTACATGGGTTTGATAATG
CAATTCCCTGTGGAGGTCATTGGAATGTAGCAGGTCATAAATTTGTAGGAGAAATAATGGGAAATTATTTATGCCAAAGA
TATACTGCTCTACTCAAAAAATAA

Upstream 100 bases:

>100_bases
TTGTTTATTTTATATTTTCAGGTACTATATATAATTTAGTTTTAACTAAATTTCTTCTCAAGATTAAAAATAATCTCTTG
CTCAACTAACCTTATATATA

Downstream 100 bases:

>100_bases
TAAAGGAGGTATAAGGGAAAATCTTTATTTATTTATGGGGTTTGTTATAGGTGCTTGAGGCCTAGGAAAGTTGGGTCTTG
AAATAGTTATTTTTTCTCTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 407; Mature: 407

Protein sequence:

>407_residues
MKKLKNLVINLGLTLTTLIFTVAVGEIGLRTAGIENSPPPRIDGELDENSPYTFKDYYRGWAGNANGKSFWTGEGIPSEI
KMNSGGFRDYERSKNKPENGLRIALLGDSFTEAIHVKLEDTYGAIIEQNLQQCPVVKDQKVEVMNFGVQGYGTAQELMTL
RHHVWDYSPDLVILVFFAANDLRNNSRTLEHDHLRPYFIYQDGQLVTDMSFRDLKFWQRDRYAFSLVDFLPFWLVQNSRI
LQLIRKVELDGKYRQYQKDYSEINLAFYKKPQPNSDWEKTWKVTESLIKLMRDEVSEKGADFMLITASDSHQVLPDIERR
DGFRKSLNVSNLFYPDIRLKNFGKKENIPVYTLAGPIWDEAKKTGKCLHGFDNAIPCGGHWNVAGHKFVGEIMGNYLCQR
YTALLKK

Sequences:

>Translated_407_residues
MKKLKNLVINLGLTLTTLIFTVAVGEIGLRTAGIENSPPPRIDGELDENSPYTFKDYYRGWAGNANGKSFWTGEGIPSEI
KMNSGGFRDYERSKNKPENGLRIALLGDSFTEAIHVKLEDTYGAIIEQNLQQCPVVKDQKVEVMNFGVQGYGTAQELMTL
RHHVWDYSPDLVILVFFAANDLRNNSRTLEHDHLRPYFIYQDGQLVTDMSFRDLKFWQRDRYAFSLVDFLPFWLVQNSRI
LQLIRKVELDGKYRQYQKDYSEINLAFYKKPQPNSDWEKTWKVTESLIKLMRDEVSEKGADFMLITASDSHQVLPDIERR
DGFRKSLNVSNLFYPDIRLKNFGKKENIPVYTLAGPIWDEAKKTGKCLHGFDNAIPCGGHWNVAGHKFVGEIMGNYLCQR
YTALLKK
>Mature_407_residues
MKKLKNLVINLGLTLTTLIFTVAVGEIGLRTAGIENSPPPRIDGELDENSPYTFKDYYRGWAGNANGKSFWTGEGIPSEI
KMNSGGFRDYERSKNKPENGLRIALLGDSFTEAIHVKLEDTYGAIIEQNLQQCPVVKDQKVEVMNFGVQGYGTAQELMTL
RHHVWDYSPDLVILVFFAANDLRNNSRTLEHDHLRPYFIYQDGQLVTDMSFRDLKFWQRDRYAFSLVDFLPFWLVQNSRI
LQLIRKVELDGKYRQYQKDYSEINLAFYKKPQPNSDWEKTWKVTESLIKLMRDEVSEKGADFMLITASDSHQVLPDIERR
DGFRKSLNVSNLFYPDIRLKNFGKKENIPVYTLAGPIWDEAKKTGKCLHGFDNAIPCGGHWNVAGHKFVGEIMGNYLCQR
YTALLKK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 46891; Mature: 46891

Theoretical pI: Translated: 8.27; Mature: 8.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKLKNLVINLGLTLTTLIFTVAVGEIGLRTAGIENSPPPRIDGELDENSPYTFKDYYRG
CCHHHHHHHHCCHHHHHHHHHHHHHHHCCEECCCCCCCCCCCCCCCCCCCCCCHHHHHCC
WAGNANGKSFWTGEGIPSEIKMNSGGFRDYERSKNKPENGLRIALLGDSFTEAIHVKLED
CCCCCCCCEEECCCCCCCCEEECCCCCCCHHHCCCCCCCCEEEEEECCCCCEEEEEEEEC
TYGAIIEQNLQQCPVVKDQKVEVMNFGVQGYGTAQELMTLRHHVWDYSPDLVILVFFAAN
HHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHCCCCCCCEEEEEEHHH
DLRNNSRTLEHDHLRPYFIYQDGQLVTDMSFRDLKFWQRDRYAFSLVDFLPFWLVQNSRI
HHCCCCCCCCCCCCCEEEEEECCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH
LQLIRKVELDGKYRQYQKDYSEINLAFYKKPQPNSDWEKTWKVTESLIKLMRDEVSEKGA
HHHHHHHCCCCHHHHHHHHHHHEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC
DFMLITASDSHQVLPDIERRDGFRKSLNVSNLFYPDIRLKNFGKKENIPVYTLAGPIWDE
CEEEEEECCCCCCCCCCHHCCCHHHCCCCCCEECCCCEECCCCCCCCCCEEEECCCCHHH
AKKTGKCLHGFDNAIPCGGHWNVAGHKFVGEIMGNYLCQRYTALLKK
HHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKKLKNLVINLGLTLTTLIFTVAVGEIGLRTAGIENSPPPRIDGELDENSPYTFKDYYRG
CCHHHHHHHHCCHHHHHHHHHHHHHHHCCEECCCCCCCCCCCCCCCCCCCCCCHHHHHCC
WAGNANGKSFWTGEGIPSEIKMNSGGFRDYERSKNKPENGLRIALLGDSFTEAIHVKLED
CCCCCCCCEEECCCCCCCCEEECCCCCCCHHHCCCCCCCCEEEEEECCCCCEEEEEEEEC
TYGAIIEQNLQQCPVVKDQKVEVMNFGVQGYGTAQELMTLRHHVWDYSPDLVILVFFAAN
HHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHCCCCCCCEEEEEEHHH
DLRNNSRTLEHDHLRPYFIYQDGQLVTDMSFRDLKFWQRDRYAFSLVDFLPFWLVQNSRI
HHCCCCCCCCCCCCCEEEEEECCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH
LQLIRKVELDGKYRQYQKDYSEINLAFYKKPQPNSDWEKTWKVTESLIKLMRDEVSEKGA
HHHHHHHCCCCHHHHHHHHHHHEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC
DFMLITASDSHQVLPDIERRDGFRKSLNVSNLFYPDIRLKNFGKKENIPVYTLAGPIWDE
CEEEEEECCCCCCCCCCHHCCCHHHCCCCCCEECCCCEECCCCCCCCCCEEEECCCCHHH
AKKTGKCLHGFDNAIPCGGHWNVAGHKFVGEIMGNYLCQRYTALLKK
HHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA